RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 TEKT1Q969V4 418 aa28.27■■■□□ 2.12
RUNDC3A-201ENST00000225441 BAG1Q99933 345 aaPredicted RBP28.27■■■□□ 2.12
RUNDC3A-201ENST00000225441 MRIQ9BWK5 157 aa28.27■■■□□ 2.12
RUNDC3A-201ENST00000225441 FAM53CQ9NYF3 392 aa28.27■■■□□ 2.12
RUNDC3A-201ENST00000225441 RAD17O75943 681 aa28.27■■■□□ 2.12
RUNDC3A-201ENST00000225441 RHBDL3P58872 404 aa28.27■■■□□ 2.12
RUNDC3A-201ENST00000225441 GRIN1Q05586 938 aa28.27■■■□□ 2.12
RUNDC3A-201ENST00000225441 NAA30Q147X3 362 aaPredicted RBP28.27■■■□□ 2.12
RUNDC3A-201ENST00000225441 MYO3BQ8WXR4 1341 aa28.26■■■□□ 2.11
RUNDC3A-201ENST00000225441 USP5P45974 858 aa28.26■■■□□ 2.11
RUNDC3A-201ENST00000225441 HDLBPQ00341 1268 aaKnown RBP28.26■■■□□ 2.11
RUNDC3A-201ENST00000225441 RASSF7Q02833 373 aa28.26■■■□□ 2.11
RUNDC3A-201ENST00000225441 TROAPQ12815 778 aa28.26■■■□□ 2.11
RUNDC3A-201ENST00000225441 NR1I3Q14994 352 aa28.26■■■□□ 2.11
RUNDC3A-201ENST00000225441 SPECC1Q5M775 1068 aa28.26■■■□□ 2.11
RUNDC3A-201ENST00000225441 SPATA1Q5VX52 437 aa28.26■■■□□ 2.11
RUNDC3A-201ENST00000225441 RSBN1LQ6PCB5 846 aaPredicted RBP28.26■■■□□ 2.11
RUNDC3A-201ENST00000225441 CTAGE1Q96RT6 745 aa28.26■■■□□ 2.11
RUNDC3A-201ENST00000225441 A0A1B0GTH6 734 aa28.25■■■□□ 2.11
RUNDC3A-201ENST00000225441 PSMD14O00487 310 aa28.25■■■□□ 2.11
RUNDC3A-201ENST00000225441 VIL1P09327 827 aaKnown RBP28.25■■■□□ 2.11
RUNDC3A-201ENST00000225441 PRR29P0C7W0 189 aa28.25■■■□□ 2.11
RUNDC3A-201ENST00000225441 CRKP46108 304 aa28.25■■■□□ 2.11
RUNDC3A-201ENST00000225441 FAM193AP78312 1265 aa28.25■■■□□ 2.11
RUNDC3A-201ENST00000225441 KMT5BQ4FZB7 885 aa28.25■■■□□ 2.11
RUNDC3A-201ENST00000225441 CTR9Q6PD62 1173 aa28.25■■■□□ 2.11
RUNDC3A-201ENST00000225441 TMTC3Q6ZXV5 915 aa28.25■■■□□ 2.11
RUNDC3A-201ENST00000225441 TEX11Q8IYF3 940 aa28.25■■■□□ 2.11
RUNDC3A-201ENST00000225441 JDP2Q8WYK2 163 aa28.25■■■□□ 2.11
RUNDC3A-201ENST00000225441 SYT17Q9BSW7 474 aa28.25■■■□□ 2.11
RUNDC3A-201ENST00000225441 MKRN1Q9UHC7 482 aaKnown RBP28.25■■■□□ 2.11
RUNDC3A-201ENST00000225441 DNAI1Q9UI46 699 aa28.25■■■□□ 2.11
RUNDC3A-201ENST00000225441 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.25■■■□□ 2.11
RUNDC3A-201ENST00000225441 ADAMTSL1Q8N6G6 1762 aa28.25■■■□□ 2.11
RUNDC3A-201ENST00000225441 SPDYE4A6NLX3 237 aa28.25■■■□□ 2.11
RUNDC3A-201ENST00000225441 TMEM232C9JQI7 657 aa28.25■■■□□ 2.11
RUNDC3A-201ENST00000225441 FMR1Q06787 632 aaKnown RBP eCLIP28.25■■■□□ 2.11
RUNDC3A-201ENST00000225441 ELF2Q15723 593 aa28.25■■■□□ 2.11
RUNDC3A-201ENST00000225441 TNFRSF25Q93038 417 aa28.25■■■□□ 2.11
RUNDC3A-201ENST00000225441 NAA15Q9BXJ9 866 aaKnown RBP28.25■■■□□ 2.11
RUNDC3A-201ENST00000225441 PRDM4Q9UKN5 801 aa28.25■■■□□ 2.11
RUNDC3A-201ENST00000225441 PPP2R2CQ9Y2T4 447 aa28.25■■■□□ 2.11
RUNDC3A-201ENST00000225441 BAZ2AQ9UIF9 1905 aaKnown RBP28.24■■■□□ 2.11
RUNDC3A-201ENST00000225441 H2AFXP16104 143 aaPredicted RBP28.24■■■□□ 2.11
RUNDC3A-201ENST00000225441 CCDC82Q8N4S0 544 aa28.24■■■□□ 2.11
RUNDC3A-201ENST00000225441 PANX2Q96RD6 677 aa28.24■■■□□ 2.11
RUNDC3A-201ENST00000225441 ARPP21Q9UBL0 812 aaPredicted RBP28.24■■■□□ 2.11
RUNDC3A-201ENST00000225441 USP17L12C9JPN9 530 aa28.23■■■□□ 2.11
RUNDC3A-201ENST00000225441 USP17L21D6R901 530 aa28.23■■■□□ 2.11
RUNDC3A-201ENST00000225441 SBK1Q52WX2 424 aa28.23■■■□□ 2.11
RUNDC3A-201ENST00000225441 KRT222Q8N1A0 295 aa28.23■■■□□ 2.11
RUNDC3A-201ENST00000225441 TGFBRAP1Q8WUH2 860 aa28.23■■■□□ 2.11
RUNDC3A-201ENST00000225441 TC2NQ8N9U0 490 aa28.22■■■□□ 2.11
RUNDC3A-201ENST00000225441 ZDHHC15Q96MV8 337 aa28.22■■■□□ 2.11
RUNDC3A-201ENST00000225441 SERPINA10Q9UK55 444 aa28.22■■■□□ 2.11
RUNDC3A-201ENST00000225441 CMTR1Q8N1G2 835 aaKnown RBP28.22■■■□□ 2.11
RUNDC3A-201ENST00000225441 PAGE5Q96GU1 130 aa28.22■■■□□ 2.11
RUNDC3A-201ENST00000225441 VPS54Q9P1Q0 977 aa28.22■■■□□ 2.11
RUNDC3A-201ENST00000225441 TAOK2Q9UL54 1235 aa28.22■■■□□ 2.11
RUNDC3A-201ENST00000225441 V9GY48 417 aaPredicted RBP28.22■■■□□ 2.11
RUNDC3A-201ENST00000225441 CDK5RAP2Q96SN8 1893 aa28.21■■■□□ 2.11
RUNDC3A-201ENST00000225441 LAMB1P07942 1786 aa28.21■■■□□ 2.11
RUNDC3A-201ENST00000225441 CYP2D7A0A087X1C5 515 aa28.21■■■□□ 2.11
RUNDC3A-201ENST00000225441 ATP2C1P98194 919 aaPredicted RBP28.21■■■□□ 2.11
RUNDC3A-201ENST00000225441 CXCL9Q07325 125 aa28.21■■■□□ 2.11
RUNDC3A-201ENST00000225441 APOBEC3HQ6NTF7 200 aaKnown RBP28.21■■■□□ 2.11
RUNDC3A-201ENST00000225441 FBXO38Q6PIJ6 1188 aa28.21■■■□□ 2.11
RUNDC3A-201ENST00000225441 CTCFLQ8NI51 663 aaPredicted RBP28.21■■■□□ 2.11
RUNDC3A-201ENST00000225441 GMLQ99445 158 aa28.21■■■□□ 2.11
RUNDC3A-201ENST00000225441 MCM9Q9NXL9 1143 aa28.21■■■□□ 2.11
RUNDC3A-201ENST00000225441 NAV1Q8NEY1 1877 aa28.21■■■□□ 2.11
RUNDC3A-201ENST00000225441 GOLGB1Q14789 3259 aaKnown RBP28.2■■■□□ 2.11
RUNDC3A-201ENST00000225441 PRELPP51888 382 aa28.2■■■□□ 2.11
RUNDC3A-201ENST00000225441 TTC38Q5R3I4 469 aa28.2■■■□□ 2.11
RUNDC3A-201ENST00000225441 MAPKAPK5Q8IW41 473 aa28.2■■■□□ 2.11
RUNDC3A-201ENST00000225441 FAM177A1Q8N128 213 aaPredicted RBP28.2■■■□□ 2.11
RUNDC3A-201ENST00000225441 EFCAB8A8MWE9 144 aa28.2■■■□□ 2.1
RUNDC3A-201ENST00000225441 KIF20AO95235 890 aa28.2■■■□□ 2.1
RUNDC3A-201ENST00000225441 DPYDQ12882 1025 aa28.2■■■□□ 2.1
RUNDC3A-201ENST00000225441 CUL4BQ13620 913 aa28.2■■■□□ 2.1
RUNDC3A-201ENST00000225441 USP40Q9NVE5 1235 aa28.2■■■□□ 2.1
RUNDC3A-201ENST00000225441 ARGLU1Q9NWB6 273 aaPredicted RBP28.2■■■□□ 2.1
RUNDC3A-201ENST00000225441 VWA3AA6NCI4 1184 aa28.19■■■□□ 2.1
RUNDC3A-201ENST00000225441 USP17L8P0C7I0 530 aa28.19■■■□□ 2.1
RUNDC3A-201ENST00000225441 SEMA3FQ13275 785 aa28.19■■■□□ 2.1
RUNDC3A-201ENST00000225441 BMS1Q14692 1282 aaKnown RBP28.19■■■□□ 2.1
RUNDC3A-201ENST00000225441 FILIP1LQ4L180 1135 aa28.19■■■□□ 2.1
RUNDC3A-201ENST00000225441 CIAPIN1Q6FI81 312 aa28.19■■■□□ 2.1
RUNDC3A-201ENST00000225441 DHX58Q96C10 678 aa28.19■■■□□ 2.1
RUNDC3A-201ENST00000225441 SHISA4Q96DD7 197 aa28.19■■■□□ 2.1
RUNDC3A-201ENST00000225441 CCDC51Q96ER9 411 aa28.19■■■□□ 2.1
RUNDC3A-201ENST00000225441 FLT1P17948 1338 aa28.19■■■□□ 2.1
RUNDC3A-201ENST00000225441 CNTNAP5Q8WYK1 1306 aa28.19■■■□□ 2.1
RUNDC3A-201ENST00000225441 SMIM22K7EJ46 135 aa28.18■■■□□ 2.1
RUNDC3A-201ENST00000225441 CYP2D6P10635 497 aa28.18■■■□□ 2.1
RUNDC3A-201ENST00000225441 CDKAL1Q5VV42 579 aa28.18■■■□□ 2.1
RUNDC3A-201ENST00000225441 CREBRFQ8IUR6 639 aa28.18■■■□□ 2.1
RUNDC3A-201ENST00000225441 PDILTQ8N807 584 aa28.18■■■□□ 2.1
RUNDC3A-201ENST00000225441 SYMPKQ92797 1274 aaKnown RBP28.18■■■□□ 2.1
RUNDC3A-201ENST00000225441 SH3GLB2Q9NR46 395 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms