RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 FOXP1Q9H334 677 aaPredicted RBP11.35□□□□□ -0.59
USP11-201ENST00000218348 TTF2Q9UNY4 1162 aaKnown RBP11.35□□□□□ -0.59
USP11-201ENST00000218348 MAPK8IP1Q9UQF2 711 aa11.35□□□□□ -0.59
USP11-201ENST00000218348 STK36Q9NRP7 1315 aa11.35□□□□□ -0.59
USP11-201ENST00000218348 MPHOSPH10O00566 681 aaKnown RBP11.35□□□□□ -0.59
USP11-201ENST00000218348 PPP6R2O75170 966 aa11.35□□□□□ -0.59
USP11-201ENST00000218348 SCG2P13521 617 aa11.35□□□□□ -0.59
USP11-201ENST00000218348 NLRP12P59046 1061 aa11.35□□□□□ -0.59
USP11-201ENST00000218348 SOGA3Q5TF21 947 aa11.35□□□□□ -0.59
USP11-201ENST00000218348 KIAA1524Q8TCG1 905 aa11.35□□□□□ -0.59
USP11-201ENST00000218348 DPF2Q92785 391 aa11.35□□□□□ -0.59
USP11-201ENST00000218348 FANCLQ9NW38 375 aa11.35□□□□□ -0.59
USP11-201ENST00000218348 CNTNAP5Q8WYK1 1306 aa11.35□□□□□ -0.59
USP11-201ENST00000218348 PRPF3O43395 683 aaKnown RBP11.35□□□□□ -0.59
USP11-201ENST00000218348 CDK8P49336 464 aa11.35□□□□□ -0.59
USP11-201ENST00000218348 RASSF7Q02833 373 aa11.35□□□□□ -0.59
USP11-201ENST00000218348 DHX8Q14562 1220 aaKnown RBP11.35□□□□□ -0.59
USP11-201ENST00000218348 DPP8Q6V1X1 898 aaPredicted RBP11.35□□□□□ -0.59
USP11-201ENST00000218348 SYMPKQ92797 1274 aaKnown RBP11.35□□□□□ -0.59
USP11-201ENST00000218348 TMEM47Q9BQJ4 181 aa11.35□□□□□ -0.59
USP11-201ENST00000218348 BRMS1Q9HCU9 246 aa11.35□□□□□ -0.59
USP11-201ENST00000218348 USP27XA6NNY8 438 aa11.34□□□□□ -0.59
USP11-201ENST00000218348 PP2D1A8MPX8 630 aa11.34□□□□□ -0.59
USP11-201ENST00000218348 FZD9O00144 591 aa11.34□□□□□ -0.59
USP11-201ENST00000218348 LDHCP07864 332 aa11.34□□□□□ -0.59
USP11-201ENST00000218348 LAMB1P07942 1786 aa11.34□□□□□ -0.59
USP11-201ENST00000218348 BMP6P22004 513 aa11.34□□□□□ -0.59
USP11-201ENST00000218348 SHROOM1Q2M3G4 852 aaPredicted RBP11.34□□□□□ -0.59
USP11-201ENST00000218348 CFAP100Q494V2 611 aa11.34□□□□□ -0.59
USP11-201ENST00000218348 TTC38Q5R3I4 469 aa11.34□□□□□ -0.59
USP11-201ENST00000218348 EEF2KMTQ96G04 330 aa11.34□□□□□ -0.59
USP11-201ENST00000218348 PHF20Q9BVI0 1012 aa11.34□□□□□ -0.59
USP11-201ENST00000218348 RASA1P20936 1047 aa11.34□□□□□ -0.59
USP11-201ENST00000218348 PTPREP23469 700 aa11.34□□□□□ -0.59
USP11-201ENST00000218348 CERS5Q8N5B7 392 aa11.34□□□□□ -0.59
USP11-201ENST00000218348 GMLQ99445 158 aa11.34□□□□□ -0.59
USP11-201ENST00000218348 HPSEQ9Y251 543 aa11.34□□□□□ -0.59
USP11-201ENST00000218348 ORC4O43929 436 aa11.34□□□□□ -0.59
USP11-201ENST00000218348 GSTO1P78417 241 aa11.34□□□□□ -0.59
USP11-201ENST00000218348 POSTNQ15063 836 aa11.34□□□□□ -0.59
USP11-201ENST00000218348 AOC3Q16853 763 aa11.34□□□□□ -0.59
USP11-201ENST00000218348 TPD52L1Q16890 204 aaPredicted RBP11.34□□□□□ -0.59
USP11-201ENST00000218348 SLC35G1Q2M3R5 365 aa11.34□□□□□ -0.59
USP11-201ENST00000218348 CEP95Q96GE4 821 aa11.34□□□□□ -0.59
USP11-201ENST00000218348 GPCPD1Q9NPB8 672 aa11.34□□□□□ -0.59
USP11-201ENST00000218348 TMEM232C9JQI7 657 aa11.33□□□□□ -0.6
USP11-201ENST00000218348 KLRF2D3W0D1 207 aa11.33□□□□□ -0.6
USP11-201ENST00000218348 CYTH3O43739 400 aa11.33□□□□□ -0.6
USP11-201ENST00000218348 SKILP12757 684 aa11.33□□□□□ -0.6
USP11-201ENST00000218348 INF2Q27J81 1249 aa11.33□□□□□ -0.6
USP11-201ENST00000218348 ZSCAN29Q8IWY8 852 aaPredicted RBP11.33□□□□□ -0.6
USP11-201ENST00000218348 GPATCH11Q8N954 259 aa11.33□□□□□ -0.6
USP11-201ENST00000218348 RBM28Q9NW13 759 aaKnown RBP11.33□□□□□ -0.6
USP11-201ENST00000218348 FLT1P17948 1338 aa11.33□□□□□ -0.6
USP11-201ENST00000218348 ERICH4A6NGS2 130 aa11.33□□□□□ -0.6
USP11-201ENST00000218348 NPY5RQ15761 445 aa11.33□□□□□ -0.6
USP11-201ENST00000218348 CT47A1Q5JQC4 288 aaPredicted RBP11.33□□□□□ -0.6
USP11-201ENST00000218348 COA1Q9GZY4 146 aa11.33□□□□□ -0.6
USP11-201ENST00000218348 ZNF277Q9NRM2 450 aaPredicted RBP11.33□□□□□ -0.6
USP11-201ENST00000218348 SH3BP1Q9Y3L3 701 aa11.33□□□□□ -0.6
USP11-201ENST00000218348 DAGLAQ9Y4D2 1042 aa11.33□□□□□ -0.6
USP11-201ENST00000218348 SCN4AP35499 1836 aa11.33□□□□□ -0.6
USP11-201ENST00000218348 DDAH1O94760 285 aa11.32□□□□□ -0.6
USP11-201ENST00000218348 CALM1P0DP23 149 aa11.32□□□□□ -0.6
USP11-201ENST00000218348 CALM2P0DP24 149 aa11.32□□□□□ -0.6
USP11-201ENST00000218348 CALM3P0DP25 149 aa11.32□□□□□ -0.6
USP11-201ENST00000218348 KIF5BP33176 963 aa11.32□□□□□ -0.6
USP11-201ENST00000218348 FKBP1AP62942 108 aaKnown RBP11.32□□□□□ -0.6
USP11-201ENST00000218348 FANCCQ00597 558 aa11.32□□□□□ -0.6
USP11-201ENST00000218348 FMR1Q06787 632 aaKnown RBP eCLIP11.32□□□□□ -0.63e-12■■■■■ 43.2
USP11-201ENST00000218348 SMARCE1Q969G3 411 aa11.32□□□□□ -0.6
USP11-201ENST00000218348 DDX4Q9NQI0 724 aaKnown RBP11.32□□□□□ -0.6
USP11-201ENST00000218348 MKRN1Q9UHC7 482 aaKnown RBP11.32□□□□□ -0.6
USP11-201ENST00000218348 MAN1B1Q9UKM7 699 aa11.32□□□□□ -0.6
USP11-201ENST00000218348 TERF1P54274 439 aa11.32□□□□□ -0.6
USP11-201ENST00000218348 NCAPHQ15003 741 aa11.32□□□□□ -0.6
USP11-201ENST00000218348 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.32□□□□□ -0.6
USP11-201ENST00000218348 USP40Q9NVE5 1235 aa11.32□□□□□ -0.6
USP11-201ENST00000218348 GEMIN8Q9NWZ8 242 aaKnown RBP11.32□□□□□ -0.6
USP11-201ENST00000218348 BCS1LQ9Y276 419 aa11.32□□□□□ -0.6
USP11-201ENST00000218348 USP17L5A8MUK1 530 aa11.32□□□□□ -0.6
USP11-201ENST00000218348 SLC16A2P36021 539 aa11.32□□□□□ -0.6
USP11-201ENST00000218348 UBASH3AP57075 661 aa11.32□□□□□ -0.6
USP11-201ENST00000218348 NFIAQ12857 509 aa11.32□□□□□ -0.6
USP11-201ENST00000218348 SBK1Q52WX2 424 aa11.32□□□□□ -0.6
USP11-201ENST00000218348 DACT2Q5SW24 774 aa11.32□□□□□ -0.6
USP11-201ENST00000218348 JAKMIP3Q5VZ66 844 aa11.32□□□□□ -0.6
USP11-201ENST00000218348 ZFPM1Q8IX07 1006 aa11.32□□□□□ -0.6
USP11-201ENST00000218348 SCAF8Q9UPN6 1271 aaKnown RBP11.32□□□□□ -0.6
USP11-201ENST00000218348 ZBTB12Q9Y330 459 aaPredicted RBP11.32□□□□□ -0.6
USP11-201ENST00000218348 MYH15Q9Y2K3 1946 aa11.31□□□□□ -0.6
USP11-201ENST00000218348 CCDC194A0A1B0GVG4 234 aa11.31□□□□□ -0.6
USP11-201ENST00000218348 TPM4P67936 248 aa11.31□□□□□ -0.6
USP11-201ENST00000218348 WWC2Q6AWC2 1192 aa11.31□□□□□ -0.6
USP11-201ENST00000218348 LRRC8AQ8IWT6 810 aa11.31□□□□□ -0.6
USP11-201ENST00000218348 TMX4Q9H1E5 349 aaPredicted RBP11.31□□□□□ -0.6
USP11-201ENST00000218348 TAOK3Q9H2K8 898 aa11.31□□□□□ -0.6
USP11-201ENST00000218348 SAMSN1Q9NSI8 373 aaKnown RBP11.31□□□□□ -0.6
USP11-201ENST00000218348 MAD2L2Q9UI95 211 aa11.31□□□□□ -0.6
USP11-201ENST00000218348 SRPRBQ9Y5M8 271 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms