RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 FGFR2P21802 821 aa13.82□□□□□ -0.2
TM9SF4-201ENST00000217315 ATP2B4P23634 1241 aa13.82□□□□□ -0.2
TM9SF4-201ENST00000217315 CKAP4Q07065 602 aaKnown RBP13.82□□□□□ -0.2
TM9SF4-201ENST00000217315 ZFYVE27Q5T4F4 411 aa13.82□□□□□ -0.2
TM9SF4-201ENST00000217315 VPS36Q86VN1 386 aa13.82□□□□□ -0.2
TM9SF4-201ENST00000217315 NSUN4Q96CB9 384 aaKnown RBP13.82□□□□□ -0.2
TM9SF4-201ENST00000217315 GDAQ9Y2T3 454 aa13.82□□□□□ -0.2
TM9SF4-201ENST00000217315 E4F1Q66K89 784 aaPredicted RBP13.82□□□□□ -0.2
TM9SF4-201ENST00000217315 SRBD1Q8N5C6 995 aaKnown RBP13.82□□□□□ -0.2
TM9SF4-201ENST00000217315 SLC39A2Q9NP94 309 aa13.82□□□□□ -0.2
TM9SF4-201ENST00000217315 PTPAQ15257 358 aa13.82□□□□□ -0.2
TM9SF4-201ENST00000217315 FCHSD1Q86WN1 690 aa13.82□□□□□ -0.2
TM9SF4-201ENST00000217315 DGKHQ86XP1 1220 aa13.82□□□□□ -0.2
TM9SF4-201ENST00000217315 TUBE1Q9UJT0 475 aa13.82□□□□□ -0.2
TM9SF4-201ENST00000217315 CUL4BQ13620 913 aa13.81□□□□□ -0.2
TM9SF4-201ENST00000217315 PSMB7Q99436 277 aa13.81□□□□□ -0.2
TM9SF4-201ENST00000217315 SALL1Q9NSC2 1324 aa13.81□□□□□ -0.2
TM9SF4-201ENST00000217315 TEX33O43247 280 aa13.81□□□□□ -0.2
TM9SF4-201ENST00000217315 RCAN1P53805 252 aa13.81□□□□□ -0.2
TM9SF4-201ENST00000217315 FMR1Q06787 632 aaKnown RBP eCLIP13.81□□□□□ -0.2
TM9SF4-201ENST00000217315 HERC4Q5GLZ8 1057 aaPredicted RBP13.81□□□□□ -0.2
TM9SF4-201ENST00000217315 FBXO38Q6PIJ6 1188 aa13.81□□□□□ -0.2
TM9SF4-201ENST00000217315 NELFCDQ8IXH7 590 aa13.81□□□□□ -0.2
TM9SF4-201ENST00000217315 JAKMIP2Q96AA8 810 aa13.81□□□□□ -0.2
TM9SF4-201ENST00000217315 CCDC51Q96ER9 411 aa13.81□□□□□ -0.2
TM9SF4-201ENST00000217315 NTRK3Q16288 839 aa13.81□□□□□ -0.2
TM9SF4-201ENST00000217315 PFKFB3Q16875 520 aaPredicted RBP13.81□□□□□ -0.2
TM9SF4-201ENST00000217315 ARHGEF1Q92888 912 aaKnown RBP13.81□□□□□ -0.2
TM9SF4-201ENST00000217315 EFCAB8A8MWE9 144 aa13.8□□□□□ -0.2
TM9SF4-201ENST00000217315 SERPINB2P05120 415 aa13.8□□□□□ -0.2
TM9SF4-201ENST00000217315 PPP1R2P41236 205 aa13.8□□□□□ -0.2
TM9SF4-201ENST00000217315 SF3B3Q15393 1217 aaKnown RBP13.8□□□□□ -0.2
TM9SF4-201ENST00000217315 TAF3Q5VWG9 929 aa13.8□□□□□ -0.2
TM9SF4-201ENST00000217315 PIGSQ96S52 555 aa13.8□□□□□ -0.2
TM9SF4-201ENST00000217315 FAM208AQ9UK61 1670 aaKnown RBP13.8□□□□□ -0.2
TM9SF4-201ENST00000217315 KLRK1P26718 216 aa13.8□□□□□ -0.2
TM9SF4-201ENST00000217315 GRAPQ13588 217 aa13.8□□□□□ -0.2
TM9SF4-201ENST00000217315 HLTFQ14527 1009 aaKnown RBP eCLIP13.8□□□□□ -0.2
TM9SF4-201ENST00000217315 GALNT17Q6IS24 598 aa13.8□□□□□ -0.2
TM9SF4-201ENST00000217315 CCDC65Q8IXS2 484 aa13.8□□□□□ -0.2
TM9SF4-201ENST00000217315 STAG2Q8N3U4 1231 aa13.8□□□□□ -0.2
TM9SF4-201ENST00000217315 ACRBPQ8NEB7 543 aa13.8□□□□□ -0.2
TM9SF4-201ENST00000217315 GRAPLQ8TC17 118 aaPredicted RBP13.8□□□□□ -0.2
TM9SF4-201ENST00000217315 TBCKQ8TEA7 893 aa13.8□□□□□ -0.2
TM9SF4-201ENST00000217315 SAMM50Q9Y512 469 aa13.8□□□□□ -0.2
TM9SF4-201ENST00000217315 PARP3Q9Y6F1 533 aa13.8□□□□□ -0.2
TM9SF4-201ENST00000217315 EPN1Q9Y6I3 576 aaPredicted RBP13.8□□□□□ -0.2
TM9SF4-201ENST00000217315 GOLGA6L10A6NI86 522 aa13.8□□□□□ -0.2
TM9SF4-201ENST00000217315 KIAA0825Q8IV33 1275 aa13.8□□□□□ -0.2
TM9SF4-201ENST00000217315 COA7Q96BR5 231 aa13.8□□□□□ -0.2
TM9SF4-201ENST00000217315 KIF13AQ9H1H9 1805 aa13.8□□□□□ -0.2
TM9SF4-201ENST00000217315 SPATA31A1Q5TZJ5 1347 aa13.8□□□□□ -0.2
TM9SF4-201ENST00000217315 TCRBV5S4A2TA0A5A2 114 aa13.8□□□□□ -0.2
TM9SF4-201ENST00000217315 PP2D1A8MPX8 630 aa13.8□□□□□ -0.2
TM9SF4-201ENST00000217315 HMGB2P26583 209 aaKnown RBP13.8□□□□□ -0.2
TM9SF4-201ENST00000217315 DNM2P50570 870 aa13.8□□□□□ -0.2
TM9SF4-201ENST00000217315 USH1GQ495M9 461 aa13.8□□□□□ -0.2
TM9SF4-201ENST00000217315 ZNF658Q5TYW1 1059 aaPredicted RBP13.8□□□□□ -0.2
TM9SF4-201ENST00000217315 TOGARAM2Q6ZUX3 1019 aa13.8□□□□□ -0.2
TM9SF4-201ENST00000217315 ZFP91Q96JP5 570 aaPredicted RBP13.8□□□□□ -0.2
TM9SF4-201ENST00000217315 NLRC4Q9NPP4 1024 aa13.8□□□□□ -0.2
TM9SF4-201ENST00000217315 TOPAZ1Q8N9V7 1692 aa13.79□□□□□ -0.2
TM9SF4-201ENST00000217315 B4DLN1 442 aa13.79□□□□□ -0.2
TM9SF4-201ENST00000217315 CDK8P49336 464 aa13.79□□□□□ -0.2
TM9SF4-201ENST00000217315 KRT31Q15323 416 aa13.79□□□□□ -0.2
TM9SF4-201ENST00000217315 SYCP3Q8IZU3 236 aa13.79□□□□□ -0.2
TM9SF4-201ENST00000217315 FBXL16Q8N461 479 aa13.79□□□□□ -0.2
TM9SF4-201ENST00000217315 VGLL2Q8N8G2 317 aa13.79□□□□□ -0.2
TM9SF4-201ENST00000217315 TMEM47Q9BQJ4 181 aa13.79□□□□□ -0.2
TM9SF4-201ENST00000217315 VPS18Q9P253 973 aa13.79□□□□□ -0.2
TM9SF4-201ENST00000217315 TYW1BQ6NUM6 668 aa13.79□□□□□ -0.2
TM9SF4-201ENST00000217315 C2CD5Q86YS7 1000 aa13.79□□□□□ -0.2
TM9SF4-201ENST00000217315 SLC35F6Q8N357 371 aa13.79□□□□□ -0.2
TM9SF4-201ENST00000217315 GPR161Q8N6U8 529 aaKnown RBP13.79□□□□□ -0.2
TM9SF4-201ENST00000217315 LINC00116Q8NCU8 138 aa13.79□□□□□ -0.2
TM9SF4-201ENST00000217315 TUBGCP2Q9BSJ2 902 aa13.79□□□□□ -0.2
TM9SF4-201ENST00000217315 PHLPP2Q6ZVD8 1323 aa13.79□□□□□ -0.2
TM9SF4-201ENST00000217315 WTIPA6NIX2 430 aaPredicted RBP13.79□□□□□ -0.2
TM9SF4-201ENST00000217315 USP8P40818 1118 aa13.79□□□□□ -0.2
TM9SF4-201ENST00000217315 RAPGEF1Q13905 1077 aa13.79□□□□□ -0.2
TM9SF4-201ENST00000217315 ADGRA1Q86SQ6 560 aa13.79□□□□□ -0.2
TM9SF4-201ENST00000217315 NUP58Q9BVL2 599 aa13.79□□□□□ -0.2
TM9SF4-201ENST00000217315 CALCOCO1Q9P1Z2 691 aa13.79□□□□□ -0.2
TM9SF4-201ENST00000217315 DCAF17Q5H9S7 520 aaPredicted RBP13.78□□□□□ -0.2
TM9SF4-201ENST00000217315 VEZTQ9HBM0 779 aa13.78□□□□□ -0.2
TM9SF4-201ENST00000217315 DISC1Q9NRI5 854 aa13.78□□□□□ -0.2
TM9SF4-201ENST00000217315 PCDHA12Q9UN75 941 aa13.78□□□□□ -0.2
TM9SF4-201ENST00000217315 CAMTA1Q9Y6Y1 1673 aa13.78□□□□□ -0.2
TM9SF4-201ENST00000217315 SEC31AO94979 1220 aaKnown RBP13.78□□□□□ -0.2
TM9SF4-201ENST00000217315 PLCG1P19174 1290 aa13.78□□□□□ -0.2
TM9SF4-201ENST00000217315 SLC16A2P36021 539 aa13.78□□□□□ -0.2
TM9SF4-201ENST00000217315 TOB1P50616 345 aaPredicted RBP13.78□□□□□ -0.2
TM9SF4-201ENST00000217315 RRAGAQ7L523 313 aa13.78□□□□□ -0.2
TM9SF4-201ENST00000217315 TRIM49BA6NDI0 452 aa13.78□□□□□ -0.2
TM9SF4-201ENST00000217315 PRPF4BQ13523 1007 aaKnown RBP13.78□□□□□ -0.2
TM9SF4-201ENST00000217315 TNIP1Q15025 636 aa13.78□□□□□ -0.2
TM9SF4-201ENST00000217315 ARL6IP4Q66PJ3 421 aaKnown RBP13.78□□□□□ -0.2
TM9SF4-201ENST00000217315 TEKT1Q969V4 418 aa13.78□□□□□ -0.2
TM9SF4-201ENST00000217315 PHF20Q9BVI0 1012 aa13.78□□□□□ -0.2
TM9SF4-201ENST00000217315 PSTPIP2Q9H939 334 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms