RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 BPIFA3Q9BQP9 254 aa19.66■□□□□ 0.74
RABGGTA-201ENST00000216840 TRIM34Q9BYJ4 488 aa19.66■□□□□ 0.74
RABGGTA-201ENST00000216840 ZKSCAN5Q9Y2L8 839 aa19.66■□□□□ 0.74
RABGGTA-201ENST00000216840 BECN2A8MW95 431 aa19.66■□□□□ 0.74
RABGGTA-201ENST00000216840 FOXN1O15353 648 aa19.66■□□□□ 0.74
RABGGTA-201ENST00000216840 ACTN4O43707 911 aaKnown RBP19.66■□□□□ 0.74
RABGGTA-201ENST00000216840 TGFB2P61812 414 aa19.66■□□□□ 0.74
RABGGTA-201ENST00000216840 ATP2B2Q01814 1243 aa19.66■□□□□ 0.74
RABGGTA-201ENST00000216840 SHROOM1Q2M3G4 852 aaPredicted RBP19.66■□□□□ 0.74
RABGGTA-201ENST00000216840 C4orf32Q8N8J7 132 aa19.66■□□□□ 0.74
RABGGTA-201ENST00000216840 PIM2Q9P1W9 311 aa19.66■□□□□ 0.74
RABGGTA-201ENST00000216840 BRCA1P38398 1863 aaKnown RBP19.65■□□□□ 0.74
RABGGTA-201ENST00000216840 SMCO2A6NFE2 343 aa19.65■□□□□ 0.74
RABGGTA-201ENST00000216840 SPDYE2BA6NHP3 402 aa19.65■□□□□ 0.74
RABGGTA-201ENST00000216840 SPDYE6P0CI01 402 aa19.65■□□□□ 0.74
RABGGTA-201ENST00000216840 ZNF75DP51815 510 aa19.65■□□□□ 0.74
RABGGTA-201ENST00000216840 PLA2G4DQ86XP0 818 aa19.65■□□□□ 0.74
RABGGTA-201ENST00000216840 AOPEPQ8N6M6 819 aa19.65■□□□□ 0.74
RABGGTA-201ENST00000216840 PDILTQ8N807 584 aa19.65■□□□□ 0.74
RABGGTA-201ENST00000216840 SYMPKQ92797 1274 aaKnown RBP19.65■□□□□ 0.74
RABGGTA-201ENST00000216840 C6orf50Q9HD87 102 aa19.65■□□□□ 0.74
RABGGTA-201ENST00000216840 VWA3AA6NCI4 1184 aa19.64■□□□□ 0.74
RABGGTA-201ENST00000216840 hCG_1984214I3L0E3 225 aa19.64■□□□□ 0.74
RABGGTA-201ENST00000216840 MSNP26038 577 aaKnown RBP19.64■□□□□ 0.74
RABGGTA-201ENST00000216840 IL17AQ16552 155 aa19.64■□□□□ 0.74
RABGGTA-201ENST00000216840 CCDC125Q86Z20 511 aa19.64■□□□□ 0.74
RABGGTA-201ENST00000216840 ZNF713Q8N859 430 aaPredicted RBP19.64■□□□□ 0.74
RABGGTA-201ENST00000216840 MKL1Q969V6 931 aa19.64■□□□□ 0.74
RABGGTA-201ENST00000216840 HOOK1Q9UJC3 728 aaKnown RBP19.64■□□□□ 0.74
RABGGTA-201ENST00000216840 PCDHA5Q9Y5H7 936 aa19.64■□□□□ 0.74
RABGGTA-201ENST00000216840 A0A087X0B3 334 aa19.64■□□□□ 0.73
RABGGTA-201ENST00000216840 GNA11P29992 359 aa19.64■□□□□ 0.73
RABGGTA-201ENST00000216840 POSTNQ15063 836 aa19.64■□□□□ 0.73
RABGGTA-201ENST00000216840 INF2Q27J81 1249 aa19.64■□□□□ 0.73
RABGGTA-201ENST00000216840 ISM2Q6H9L7 571 aa19.64■□□□□ 0.73
RABGGTA-201ENST00000216840 SARM1Q6SZW1 724 aa19.64■□□□□ 0.73
RABGGTA-201ENST00000216840 TRIM5Q9C035 493 aa19.64■□□□□ 0.73
RABGGTA-201ENST00000216840 KANSL2Q9H9L4 492 aa19.64■□□□□ 0.73
RABGGTA-201ENST00000216840 NYAP2Q9P242 653 aa19.64■□□□□ 0.73
RABGGTA-201ENST00000216840 ZNRF3Q9ULT6 936 aa19.64■□□□□ 0.73
RABGGTA-201ENST00000216840 ATF5Q9Y2D1 282 aaPredicted RBP19.64■□□□□ 0.73
RABGGTA-201ENST00000216840 FER1L6Q2WGJ9 1857 aa19.63■□□□□ 0.73
RABGGTA-201ENST00000216840 ESYT2A0FGR8 921 aa19.63■□□□□ 0.73
RABGGTA-201ENST00000216840 EEF2P13639 858 aaKnown RBP19.63■□□□□ 0.73
RABGGTA-201ENST00000216840 GPATCH4Q5T3I0 446 aaKnown RBP19.63■□□□□ 0.73
RABGGTA-201ENST00000216840 ARL6IP4Q66PJ3 421 aaKnown RBP19.63■□□□□ 0.73
RABGGTA-201ENST00000216840 TTBK2Q6IQ55 1244 aa19.63■□□□□ 0.73
RABGGTA-201ENST00000216840 KANK3Q6NY19 840 aa19.63■□□□□ 0.73
RABGGTA-201ENST00000216840 NIM1KQ8IY84 436 aa19.63■□□□□ 0.73
RABGGTA-201ENST00000216840 JMJD4Q9H9V9 463 aa19.63■□□□□ 0.73
RABGGTA-201ENST00000216840 HDAC9Q9UKV0 1011 aa19.63■□□□□ 0.73
RABGGTA-201ENST00000216840 ZBTB12Q9Y330 459 aaPredicted RBP19.63■□□□□ 0.73
RABGGTA-201ENST00000216840 ARFGEF1Q9Y6D6 1849 aa19.63■□□□□ 0.73
RABGGTA-201ENST00000216840 SEPT2Q15019 361 aa19.63■□□□□ 0.73
RABGGTA-201ENST00000216840 KRT25Q7Z3Z0 450 aa19.63■□□□□ 0.73
RABGGTA-201ENST00000216840 ADGRF4Q8IZF3 695 aa19.63■□□□□ 0.73
RABGGTA-201ENST00000216840 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.63■□□□□ 0.73
RABGGTA-201ENST00000216840 PRR29P0C7W0 189 aa19.62■□□□□ 0.73
RABGGTA-201ENST00000216840 DLGAP5Q15398 846 aa19.62■□□□□ 0.73
RABGGTA-201ENST00000216840 CCDC96Q2M329 555 aa19.62■□□□□ 0.73
RABGGTA-201ENST00000216840 TMEM179Q6ZVK1 233 aa19.62■□□□□ 0.73
RABGGTA-201ENST00000216840 SIAH1Q8IUQ4 282 aa19.62■□□□□ 0.73
RABGGTA-201ENST00000216840 TMOD2Q9NZR1 351 aa19.62■□□□□ 0.73
RABGGTA-201ENST00000216840 ZNF70Q9UC06 446 aaPredicted RBP19.62■□□□□ 0.73
RABGGTA-201ENST00000216840 POLD1P28340 1107 aa19.61■□□□□ 0.73
RABGGTA-201ENST00000216840 ABCB5Q2M3G0 1257 aa19.61■□□□□ 0.73
RABGGTA-201ENST00000216840 NT5DC1Q5TFE4 455 aa19.61■□□□□ 0.73
RABGGTA-201ENST00000216840 KCTD1Q719H9 257 aa19.61■□□□□ 0.73
RABGGTA-201ENST00000216840 GRAMD1CQ8IYS0 662 aa19.61■□□□□ 0.73
RABGGTA-201ENST00000216840 OGFOD1Q8N543 542 aa19.61■□□□□ 0.73
RABGGTA-201ENST00000216840 SPC24Q8NBT2 197 aa19.61■□□□□ 0.73
RABGGTA-201ENST00000216840 COA7Q96BR5 231 aa19.61■□□□□ 0.73
RABGGTA-201ENST00000216840 DHX58Q96C10 678 aa19.61■□□□□ 0.73
RABGGTA-201ENST00000216840 CSRNP1Q96S65 589 aa19.61■□□□□ 0.73
RABGGTA-201ENST00000216840 MTFR1LQ9H019 292 aa19.61■□□□□ 0.73
RABGGTA-201ENST00000216840 PNMA6FA0A0J9YX94 578 aa19.61■□□□□ 0.73
RABGGTA-201ENST00000216840 CLRN2A0PK11 232 aa19.61■□□□□ 0.73
RABGGTA-201ENST00000216840 TCP10L2B9ZVM9 353 aa19.61■□□□□ 0.73
RABGGTA-201ENST00000216840 GDF11O95390 407 aa19.61■□□□□ 0.73
RABGGTA-201ENST00000216840 SARSP49591 514 aaKnown RBP19.61■□□□□ 0.73
RABGGTA-201ENST00000216840 DALRD3Q5D0E6 543 aaKnown RBP19.61■□□□□ 0.73
RABGGTA-201ENST00000216840 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.61■□□□□ 0.73
RABGGTA-201ENST00000216840 SLFN14P0C7P3 912 aa19.6■□□□□ 0.73
RABGGTA-201ENST00000216840 ICA1Q05084 483 aa19.6■□□□□ 0.73
RABGGTA-201ENST00000216840 NONOQ15233 471 aaKnown RBP eCLIP19.6■□□□□ 0.73
RABGGTA-201ENST00000216840 AGBL3Q8NEM8 1001 aa19.6■□□□□ 0.73
RABGGTA-201ENST00000216840 DCAF4Q8WV16 495 aa19.6■□□□□ 0.73
RABGGTA-201ENST00000216840 MTMR8Q96EF0 704 aa19.6■□□□□ 0.73
RABGGTA-201ENST00000216840 MAN1B1Q9UKM7 699 aa19.6■□□□□ 0.73
RABGGTA-201ENST00000216840 SLC16A2P36021 539 aa19.6■□□□□ 0.73
RABGGTA-201ENST00000216840 LONP1P36776 959 aaKnown RBP19.6■□□□□ 0.73
RABGGTA-201ENST00000216840 JAG1P78504 1218 aa19.6■□□□□ 0.73
RABGGTA-201ENST00000216840 RRP1BQ14684 758 aaKnown RBP19.6■□□□□ 0.73
RABGGTA-201ENST00000216840 NCAPHQ15003 741 aa19.6■□□□□ 0.73
RABGGTA-201ENST00000216840 SPDYE2Q495Y8 402 aa19.6■□□□□ 0.73
RABGGTA-201ENST00000216840 SH3RF1Q7Z6J0 888 aa19.6■□□□□ 0.73
RABGGTA-201ENST00000216840 REXO1Q8N1G1 1221 aaKnown RBP19.6■□□□□ 0.73
RABGGTA-201ENST00000216840 TMEM60Q9H2L4 133 aa19.6■□□□□ 0.73
RABGGTA-201ENST00000216840 USP17L10C9JJH3 530 aa19.59■□□□□ 0.73
RABGGTA-201ENST00000216840 PPP1R11O60927 126 aaPredicted RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms