RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 RNASE9P60153 205 aaKnown RBP15.33■□□□□ 0.04
SIX4-201ENST00000216513 SNRNP48Q6IEG0 339 aaKnown RBP15.33■□□□□ 0.04
SIX4-201ENST00000216513 HSPD1P10809 573 aaKnown RBP15.32■□□□□ 0.04
SIX4-201ENST00000216513 MTERF4Q7Z6M4 381 aaKnown RBP15.32■□□□□ 0.04
SIX4-201ENST00000216513 FHDC1Q9C0D6 1143 aaPredicted RBP15.32■□□□□ 0.04
SIX4-201ENST00000216513 TTC30AQ86WT1 665 aa15.32■□□□□ 0.04
SIX4-201ENST00000216513 DPF3Q92784 378 aa15.32■□□□□ 0.04
SIX4-201ENST00000216513 MADDQ8WXG6 1647 aa15.32■□□□□ 0.04
SIX4-201ENST00000216513 INO80B-WBP1J3KQ70 363 aa15.32■□□□□ 0.04
SIX4-201ENST00000216513 CYP4A11Q02928 519 aa15.32■□□□□ 0.04
SIX4-201ENST00000216513 SNW1Q13573 536 aaKnown RBP15.32■□□□□ 0.04
SIX4-201ENST00000216513 TFDP1Q14186 410 aa15.32■□□□□ 0.04
SIX4-201ENST00000216513 INF2Q27J81 1249 aa15.32■□□□□ 0.04
SIX4-201ENST00000216513 USP17L2Q6R6M4 530 aa15.32■□□□□ 0.04
SIX4-201ENST00000216513 CABP7Q86V35 215 aa15.32■□□□□ 0.04
SIX4-201ENST00000216513 NEK11Q8NG66 645 aa15.32■□□□□ 0.04
SIX4-201ENST00000216513 RIOK1Q9BRS2 568 aaKnown RBP15.32■□□□□ 0.04
SIX4-201ENST00000216513 INO80BQ9C086 356 aaPredicted RBP15.32■□□□□ 0.04
SIX4-201ENST00000216513 MKRN1Q9UHC7 482 aaKnown RBP15.32■□□□□ 0.04
SIX4-201ENST00000216513 GLI2P10070 1586 aa15.32■□□□□ 0.04
SIX4-201ENST00000216513 CDK8P49336 464 aa15.32■□□□□ 0.04
SIX4-201ENST00000216513 RASA3Q14644 834 aa15.32■□□□□ 0.04
SIX4-201ENST00000216513 ASPRV1Q53RT3 343 aa15.32■□□□□ 0.04
SIX4-201ENST00000216513 KIF18AQ8NI77 898 aa15.32■□□□□ 0.04
SIX4-201ENST00000216513 PGBD1Q96JS3 809 aa15.32■□□□□ 0.04
SIX4-201ENST00000216513 MXD3Q9BW11 206 aa15.32■□□□□ 0.04
SIX4-201ENST00000216513 MAK16Q9BXY0 300 aaKnown RBP15.32■□□□□ 0.04
SIX4-201ENST00000216513 TECP42680 631 aa15.32■□□□□ 0.04
SIX4-201ENST00000216513 PPP2R5BQ15173 497 aa15.32■□□□□ 0.04
SIX4-201ENST00000216513 RNF207Q6ZRF8 634 aa15.32■□□□□ 0.04
SIX4-201ENST00000216513 KBTBD13C9JR72 458 aa15.31■□□□□ 0.04
SIX4-201ENST00000216513 M0R2C6 588 aa15.31■□□□□ 0.04
SIX4-201ENST00000216513 EIF3JO75822 258 aaKnown RBP15.31■□□□□ 0.04
SIX4-201ENST00000216513 EPHX2P34913 555 aa15.31■□□□□ 0.04
SIX4-201ENST00000216513 TSNARE1Q96NA8 513 aa15.31■□□□□ 0.04
SIX4-201ENST00000216513 TBC1D16Q8TBP0 767 aa15.31■□□□□ 0.04
SIX4-201ENST00000216513 SNX14Q9Y5W7 946 aa15.31■□□□□ 0.04
SIX4-201ENST00000216513 F13A1P00488 732 aa15.31■□□□□ 0.04
SIX4-201ENST00000216513 HMGCS2P54868 508 aa15.31■□□□□ 0.04
SIX4-201ENST00000216513 SNAPC2Q13487 334 aa15.31■□□□□ 0.04
SIX4-201ENST00000216513 TMEM179Q6ZVK1 233 aa15.31■□□□□ 0.04
SIX4-201ENST00000216513 MAATS1Q7Z4T9 603 aa15.31■□□□□ 0.04
SIX4-201ENST00000216513 NBPF11Q86T75 865 aa15.31■□□□□ 0.04
SIX4-201ENST00000216513 STAMQ92783 540 aa15.31■□□□□ 0.04
SIX4-201ENST00000216513 SLF1Q9BQI6 1058 aa15.31■□□□□ 0.04
SIX4-201ENST00000216513 LZTFL1Q9NQ48 299 aa15.31■□□□□ 0.04
SIX4-201ENST00000216513 GABPAQ06546 454 aa15.31■□□□□ 0.04
SIX4-201ENST00000216513 DNAJC21Q5F1R6 531 aaKnown RBP15.31■□□□□ 0.04
SIX4-201ENST00000216513 CFAP58Q5T655 872 aa15.31■□□□□ 0.04
SIX4-201ENST00000216513 FAM160B2Q86V87 743 aa15.31■□□□□ 0.04
SIX4-201ENST00000216513 PAIP2Q9BPZ3 127 aaKnown RBP15.31■□□□□ 0.04
SIX4-201ENST00000216513 PCDHA12Q9UN75 941 aa15.31■□□□□ 0.04
SIX4-201ENST00000216513 FCER1AP12319 257 aa15.31■□□□□ 0.04
SIX4-201ENST00000216513 VEGFAP15692 232 aaPredicted RBP15.31■□□□□ 0.04
SIX4-201ENST00000216513 C7orf31Q8N865 590 aa15.31■□□□□ 0.04
SIX4-201ENST00000216513 CCL15-CCL14A0A0B4J2E2 113 aa15.3■□□□□ 0.04
SIX4-201ENST00000216513 CYP2B6P20813 491 aa15.3■□□□□ 0.04
SIX4-201ENST00000216513 UBE2HP62256 183 aa15.3■□□□□ 0.04
SIX4-201ENST00000216513 CCL15Q16663 113 aa15.3■□□□□ 0.04
SIX4-201ENST00000216513 BLIDQ8IZY5 108 aa15.3■□□□□ 0.04
SIX4-201ENST00000216513 CRAMP1Q96RY5 1269 aa15.3■□□□□ 0.04
SIX4-201ENST00000216513 P4HA1P13674 534 aa15.3■□□□□ 0.04
SIX4-201ENST00000216513 HOXA13P31271 388 aaPredicted RBP15.3■□□□□ 0.04
SIX4-201ENST00000216513 STYK1Q6J9G0 422 aa15.3■□□□□ 0.04
SIX4-201ENST00000216513 ABCC4O15439 1325 aa15.3■□□□□ 0.04
SIX4-201ENST00000216513 AOX1Q06278 1338 aa15.3■□□□□ 0.04
SIX4-201ENST00000216513 SGSM2O43147 1006 aa15.3■□□□□ 0.04
SIX4-201ENST00000216513 XRCC6P12956 609 aaKnown RBP eCLIP15.3■□□□□ 0.04
SIX4-201ENST00000216513 LRCH2Q5VUJ6 765 aa15.3■□□□□ 0.04
SIX4-201ENST00000216513 GSTA5Q7RTV2 222 aa15.3■□□□□ 0.04
SIX4-201ENST00000216513 FANCBQ8NB91 859 aa15.3■□□□□ 0.04
SIX4-201ENST00000216513 ATP6V0A2Q9Y487 856 aa15.3■□□□□ 0.04
SIX4-201ENST00000216513 ATF7P17544 494 aaPredicted RBP15.3■□□□□ 0.04
SIX4-201ENST00000216513 PAFAH1B1P43034 410 aa15.3■□□□□ 0.04
SIX4-201ENST00000216513 PNPLA6Q8IY17 1366 aa15.3■□□□□ 0.04
SIX4-201ENST00000216513 CDK12Q9NYV4 1490 aaPredicted RBP15.3■□□□□ 0.04
SIX4-201ENST00000216513 KIFAP3Q92845 792 aa15.3■□□□□ 0.04
SIX4-201ENST00000216513 NOX5Q96PH1 765 aa15.3■□□□□ 0.04
SIX4-201ENST00000216513 K7ENM7 598 aa15.29■□□□□ 0.04
SIX4-201ENST00000216513 ELMSAN1Q6PJG2 1045 aa15.29■□□□□ 0.04
SIX4-201ENST00000216513 PIH1D3Q9NQM4 214 aaKnown RBP15.29■□□□□ 0.04
SIX4-201ENST00000216513 DNAI1Q9UI46 699 aa15.29■□□□□ 0.04
SIX4-201ENST00000216513 UBE2Q2LH0YL09 131 aa15.29■□□□□ 0.04
SIX4-201ENST00000216513 COBLO75128 1261 aa15.29■□□□□ 0.04
SIX4-201ENST00000216513 UBXN1Q04323 297 aa15.29■□□□□ 0.04
SIX4-201ENST00000216513 CTNND2Q9UQB3 1225 aa15.29■□□□□ 0.04
SIX4-201ENST00000216513 DMP1Q13316 513 aaPredicted RBP15.29■□□□□ 0.04
SIX4-201ENST00000216513 SEPT2Q15019 361 aa15.29■□□□□ 0.04
SIX4-201ENST00000216513 KRT40Q6A162 431 aa15.29■□□□□ 0.04
SIX4-201ENST00000216513 MCTP2Q6DN12 878 aa15.29■□□□□ 0.04
SIX4-201ENST00000216513 CNNM4Q6P4Q7 775 aa15.29■□□□□ 0.04
SIX4-201ENST00000216513 SLFN12Q8IYM2 578 aa15.29■□□□□ 0.04
SIX4-201ENST00000216513 PIGSQ96S52 555 aa15.29■□□□□ 0.04
SIX4-201ENST00000216513 NCAPD2Q15021 1401 aa15.29■□□□□ 0.04
SIX4-201ENST00000216513 MAP2K1Q02750 393 aaPredicted RBP15.29■□□□□ 0.04
SIX4-201ENST00000216513 SMC5Q8IY18 1101 aa15.29■□□□□ 0.04
SIX4-201ENST00000216513 ZSCAN12O43309 604 aa15.29■□□□□ 0.04
SIX4-201ENST00000216513 TNNC2P02585 160 aa15.29■□□□□ 0.04
SIX4-201ENST00000216513 RSBN1LQ6PCB5 846 aaPredicted RBP15.29■□□□□ 0.04
SIX4-201ENST00000216513 GPBP1Q86WP2 473 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms