RNA–Protein interactions for RNA: ENST00000216288.11

MARK3-201, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best) BASIC

Gene MARK3, Length 2,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-201ENST00000216288 GOLGA6L9A6NEM1 432 aa13.79□□□□□ -0.2
MARK3-201ENST00000216288 ZNF185O15231 689 aa13.79□□□□□ -0.2
MARK3-201ENST00000216288 PARP1P09874 1014 aaKnown RBP13.79□□□□□ -0.2
MARK3-201ENST00000216288 DNA2P51530 1060 aa13.79□□□□□ -0.2
MARK3-201ENST00000216288 FAM193AP78312 1265 aa13.79□□□□□ -0.2
MARK3-201ENST00000216288 LETM2Q2VYF4 491 aa13.79□□□□□ -0.2
MARK3-201ENST00000216288 AMIGO3Q86WK7 504 aa13.79□□□□□ -0.2
MARK3-201ENST00000216288 DZIP1Q86YF9 867 aaKnown RBP13.79□□□□□ -0.2
MARK3-201ENST00000216288 MAPKAPK5Q8IW41 473 aa13.79□□□□□ -0.2
MARK3-201ENST00000216288 PNMA1Q8ND90 353 aa13.79□□□□□ -0.2
MARK3-201ENST00000216288 RABEP2Q9H5N1 569 aa13.79□□□□□ -0.2
MARK3-201ENST00000216288 MKNK2Q9HBH9 465 aa13.79□□□□□ -0.2
MARK3-201ENST00000216288 SHANK3Q9BYB0 1731 aa13.79□□□□□ -0.2
MARK3-201ENST00000216288 CCDC194A0A1B0GVG4 234 aa13.79□□□□□ -0.2
MARK3-201ENST00000216288 FCER1AP12319 257 aa13.79□□□□□ -0.2
MARK3-201ENST00000216288 ARHGAP25P42331 645 aa13.79□□□□□ -0.2
MARK3-201ENST00000216288 TGFBRAP1Q8WUH2 860 aa13.79□□□□□ -0.2
MARK3-201ENST00000216288 RIN2Q8WYP3 895 aaPredicted RBP13.79□□□□□ -0.2
MARK3-201ENST00000216288 HIBADHP31937 336 aaKnown RBP13.78□□□□□ -0.2
MARK3-201ENST00000216288 UBA7P41226 1012 aa13.78□□□□□ -0.2
MARK3-201ENST00000216288 EIF6P56537 245 aaKnown RBP13.78□□□□□ -0.2
MARK3-201ENST00000216288 NAALADL2Q58DX5 795 aa13.78□□□□□ -0.2
MARK3-201ENST00000216288 KRT26Q7Z3Y9 468 aa13.78□□□□□ -0.2
MARK3-201ENST00000216288 CNGA4Q8IV77 575 aa13.78□□□□□ -0.2
MARK3-201ENST00000216288 BLIDQ8IZY5 108 aa13.78□□□□□ -0.2
MARK3-201ENST00000216288 LINC00116Q8NCU8 138 aa13.78□□□□□ -0.2
MARK3-201ENST00000216288 SH3RF3Q8TEJ3 882 aaPredicted RBP13.78□□□□□ -0.2
MARK3-201ENST00000216288 MYH13Q9UKX3 1938 aa13.78□□□□□ -0.2
MARK3-201ENST00000216288 RCCD1A6NED2 376 aa13.78□□□□□ -0.2
MARK3-201ENST00000216288 CYTH3O43739 400 aa13.78□□□□□ -0.2
MARK3-201ENST00000216288 PLEKP08567 350 aaPredicted RBP13.78□□□□□ -0.2
MARK3-201ENST00000216288 SLURP2P0DP57 97 aa13.78□□□□□ -0.2
MARK3-201ENST00000216288 PARP10Q53GL7 1025 aa13.78□□□□□ -0.2
MARK3-201ENST00000216288 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.78□□□□□ -0.2
MARK3-201ENST00000216288 CLEC10AQ8IUN9 316 aa13.78□□□□□ -0.2
MARK3-201ENST00000216288 UBA5Q9GZZ9 404 aa13.78□□□□□ -0.2
MARK3-201ENST00000216288 SMARCAL1Q9NZC9 954 aa13.78□□□□□ -0.2
MARK3-201ENST00000216288 ADAM21Q9UKJ8 722 aa13.78□□□□□ -0.2
MARK3-201ENST00000216288 TUBB4AP04350 444 aa13.77□□□□□ -0.2
MARK3-201ENST00000216288 ATP1A1P05023 1023 aaKnown RBP13.77□□□□□ -0.2
MARK3-201ENST00000216288 MATR3P43243 847 aaKnown RBP eCLIP13.77□□□□□ -0.26e-12■■■■□ 20.8
MARK3-201ENST00000216288 RPS8P62241 208 aaKnown RBP13.77□□□□□ -0.2
MARK3-201ENST00000216288 PFKFB3Q16875 520 aaPredicted RBP13.77□□□□□ -0.2
MARK3-201ENST00000216288 CRNKL1Q9BZJ0 848 aaKnown RBP13.77□□□□□ -0.2
MARK3-201ENST00000216288 ANKIB1Q9P2G1 1089 aa13.77□□□□□ -0.2
MARK3-201ENST00000216288 FAN1Q9Y2M0 1017 aa13.77□□□□□ -0.2
MARK3-201ENST00000216288 MYH3P11055 1940 aa13.77□□□□□ -0.2
MARK3-201ENST00000216288 USP17L2Q6R6M4 530 aa13.77□□□□□ -0.21
MARK3-201ENST00000216288 ANKRD13CQ8N6S4 541 aa13.77□□□□□ -0.21
MARK3-201ENST00000216288 CTAGE1Q96RT6 745 aa13.77□□□□□ -0.21
MARK3-201ENST00000216288 NAPGQ99747 312 aaPredicted RBP13.77□□□□□ -0.21
MARK3-201ENST00000216288 LACRTQ9GZZ8 138 aa13.77□□□□□ -0.21
MARK3-201ENST00000216288 RBM28Q9NW13 759 aaKnown RBP13.77□□□□□ -0.21
MARK3-201ENST00000216288 ANAPC4Q9UJX5 808 aa13.77□□□□□ -0.21
MARK3-201ENST00000216288 EPN1Q9Y6I3 576 aaPredicted RBP13.77□□□□□ -0.21
MARK3-201ENST00000216288 LRP6O75581 1613 aa13.77□□□□□ -0.21
MARK3-201ENST00000216288 MYH6P13533 1939 aa13.77□□□□□ -0.21
MARK3-201ENST00000216288 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.77□□□□□ -0.21
MARK3-201ENST00000216288 CCDC66A2RUB6 948 aa13.77□□□□□ -0.21
MARK3-201ENST00000216288 CTAGE15A4D2H0 777 aa13.77□□□□□ -0.21
MARK3-201ENST00000216288 GTPBP6O43824 516 aaPredicted RBP13.77□□□□□ -0.21
MARK3-201ENST00000216288 CTAGE8P0CG41 777 aa13.77□□□□□ -0.21
MARK3-201ENST00000216288 TRIM21P19474 475 aaKnown RBP13.77□□□□□ -0.21
MARK3-201ENST00000216288 TECP42680 631 aa13.77□□□□□ -0.21
MARK3-201ENST00000216288 TNNT3P45378 269 aaPredicted RBP13.77□□□□□ -0.21
MARK3-201ENST00000216288 ENOX2Q16206 610 aaKnown RBP13.77□□□□□ -0.21
MARK3-201ENST00000216288 CCDC122Q5T0U0 273 aa13.77□□□□□ -0.21
MARK3-201ENST00000216288 FOXR1Q6PIV2 292 aa13.77□□□□□ -0.21
MARK3-201ENST00000216288 DTHD1Q6ZMT9 781 aa13.77□□□□□ -0.21
MARK3-201ENST00000216288 CTAGE6Q86UF2 777 aa13.77□□□□□ -0.21
MARK3-201ENST00000216288 NBPF5PQ86XG9 351 aaPredicted RBP13.77□□□□□ -0.21
MARK3-201ENST00000216288 CTAGE4Q8IX94 777 aa13.77□□□□□ -0.21
MARK3-201ENST00000216288 KANSL2Q9H9L4 492 aa13.77□□□□□ -0.21
MARK3-201ENST00000216288 CHD4Q14839 1912 aa13.76□□□□□ -0.21
MARK3-201ENST00000216288 ZNF804BA4D1E1 1349 aa13.76□□□□□ -0.21
MARK3-201ENST00000216288 ITGB4P16144 1822 aa13.76□□□□□ -0.21
MARK3-201ENST00000216288 ZPR1O75312 459 aa13.76□□□□□ -0.21
MARK3-201ENST00000216288 NDUFA10O95299 355 aa13.76□□□□□ -0.21
MARK3-201ENST00000216288 BEND6Q5SZJ8 279 aaPredicted RBP13.76□□□□□ -0.21
MARK3-201ENST00000216288 ZNF658Q5TYW1 1059 aaPredicted RBP13.76□□□□□ -0.21
MARK3-201ENST00000216288 DYMQ7RTS9 669 aa13.76□□□□□ -0.21
MARK3-201ENST00000216288 MMS19Q96T76 1030 aa13.76□□□□□ -0.21
MARK3-201ENST00000216288 BRIP1Q9BX63 1249 aa13.76□□□□□ -0.21
MARK3-201ENST00000216288 BSDC1Q9NW68 430 aaPredicted RBP13.76□□□□□ -0.21
MARK3-201ENST00000216288 DDX60Q8IY21 1712 aaKnown RBP13.76□□□□□ -0.21
MARK3-201ENST00000216288 MYO1BO43795 1136 aa13.76□□□□□ -0.21
MARK3-201ENST00000216288 TSPY3P0CV98 308 aa13.76□□□□□ -0.21
MARK3-201ENST00000216288 TSPY8P0CW00 308 aa13.76□□□□□ -0.21
MARK3-201ENST00000216288 STK4Q13043 487 aa13.76□□□□□ -0.21
MARK3-201ENST00000216288 UBE4AQ14139 1066 aa13.76□□□□□ -0.21
MARK3-201ENST00000216288 FAM98CQ17RN3 349 aaKnown RBP13.76□□□□□ -0.21
MARK3-201ENST00000216288 CYP26C1Q6V0L0 522 aa13.76□□□□□ -0.21
MARK3-201ENST00000216288 SLC39A2Q9NP94 309 aa13.76□□□□□ -0.21
MARK3-201ENST00000216288 DISC1Q9NRI5 854 aa13.76□□□□□ -0.21
MARK3-201ENST00000216288 LCMT1Q9UIC8 334 aa13.76□□□□□ -0.21
MARK3-201ENST00000216288 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.76□□□□□ -0.21
MARK3-201ENST00000216288 RAD21O60216 631 aa13.75□□□□□ -0.21
MARK3-201ENST00000216288 CCNT1O60563 726 aaKnown RBP13.75□□□□□ -0.21
MARK3-201ENST00000216288 CXCR5P32302 372 aa13.75□□□□□ -0.21
MARK3-201ENST00000216288 IRX5P78411 483 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms