RNA–Protein interactions for RNA: ENST00000081029.7

MRPS35-201, Transcript of mitochondrial ribosomal protein S35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS35, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-201ENST00000081029 GMCL1Q96IK5 515 aa12.35□□□□□ -0.43
MRPS35-201ENST00000081029 TRIM47Q96LD4 638 aa12.35□□□□□ -0.43
MRPS35-201ENST00000081029 SLKQ9H2G2 1235 aaPredicted RBP12.35□□□□□ -0.43
MRPS35-201ENST00000081029 PPP1R9AQ9ULJ8 1098 aa12.35□□□□□ -0.43
MRPS35-201ENST00000081029 RABGAP1Q9Y3P9 1069 aa12.35□□□□□ -0.43
MRPS35-201ENST00000081029 VWA5AO00534 786 aa12.34□□□□□ -0.43
MRPS35-201ENST00000081029 PDHBP11177 359 aa12.34□□□□□ -0.43
MRPS35-201ENST00000081029 MCM2P49736 904 aa12.34□□□□□ -0.43
MRPS35-201ENST00000081029 SEC23AQ15436 765 aa12.34□□□□□ -0.43
MRPS35-201ENST00000081029 OTOP1Q7RTM1 612 aa12.34□□□□□ -0.43
MRPS35-201ENST00000081029 IGDCC4Q8TDY8 1250 aa12.34□□□□□ -0.43
MRPS35-201ENST00000081029 CHURC1Q8WUH1 139 aa12.34□□□□□ -0.43
MRPS35-201ENST00000081029 DCAF4Q8WV16 495 aa12.34□□□□□ -0.43
MRPS35-201ENST00000081029 ZBED4O75132 1171 aa12.34□□□□□ -0.43
MRPS35-201ENST00000081029 CNMDO75829 334 aa12.34□□□□□ -0.43
MRPS35-201ENST00000081029 CASTP20810 708 aaKnown RBP12.34□□□□□ -0.43
MRPS35-201ENST00000081029 CCNA1P78396 465 aa12.34□□□□□ -0.43
MRPS35-201ENST00000081029 LBX2Q6XYB7 198 aa12.34□□□□□ -0.43
MRPS35-201ENST00000081029 DHX32Q7L7V1 743 aaKnown RBP12.34□□□□□ -0.43
MRPS35-201ENST00000081029 NUP133Q8WUM0 1156 aa12.34□□□□□ -0.43
MRPS35-201ENST00000081029 ANKS1AQ92625 1134 aa12.34□□□□□ -0.43
MRPS35-201ENST00000081029 COA7Q96BR5 231 aa12.34□□□□□ -0.43
MRPS35-201ENST00000081029 UBA5Q9GZZ9 404 aa12.34□□□□□ -0.43
MRPS35-201ENST00000081029 PORCNQ9H237 461 aa12.34□□□□□ -0.43
MRPS35-201ENST00000081029 MORF4L1Q9UBU8 362 aa12.34□□□□□ -0.43
MRPS35-201ENST00000081029 NAP1L2Q9ULW6 460 aaPredicted RBP12.34□□□□□ -0.43
MRPS35-201ENST00000081029 CCDC69A6NI79 296 aa12.33□□□□□ -0.44
MRPS35-201ENST00000081029 DHX16O60231 1041 aaKnown RBP12.33□□□□□ -0.44
MRPS35-201ENST00000081029 PSMA5P28066 241 aa12.33□□□□□ -0.44
MRPS35-201ENST00000081029 HOXD10P28358 340 aa12.33□□□□□ -0.44
MRPS35-201ENST00000081029 DDIT3P35638 169 aa12.33□□□□□ -0.44
MRPS35-201ENST00000081029 TMEM132BQ14DG7 1078 aa12.33□□□□□ -0.44
MRPS35-201ENST00000081029 BLOC1S2Q6QNY1 142 aa12.33□□□□□ -0.44
MRPS35-201ENST00000081029 CATIPQ7Z7H3 387 aa12.33□□□□□ -0.44
MRPS35-201ENST00000081029 NCAPG2Q86XI2 1143 aa12.33□□□□□ -0.44
MRPS35-201ENST00000081029 TNS4Q8IZW8 715 aa12.33□□□□□ -0.44
MRPS35-201ENST00000081029 MB21D1Q8N884 522 aa12.33□□□□□ -0.44
MRPS35-201ENST00000081029 MYL10Q9BUA6 226 aa12.33□□□□□ -0.44
MRPS35-201ENST00000081029 MCOLN1Q9GZU1 580 aa12.33□□□□□ -0.44
MRPS35-201ENST00000081029 SPATC1LQ9H0A9 340 aa12.33□□□□□ -0.44
MRPS35-201ENST00000081029 CPVLQ9H3G5 476 aa12.33□□□□□ -0.44
MRPS35-201ENST00000081029 RAVER2Q9HCJ3 691 aaKnown RBP12.33□□□□□ -0.44
MRPS35-201ENST00000081029 VAT1LQ9HCJ6 419 aa12.33□□□□□ -0.44
MRPS35-201ENST00000081029 PARP1P09874 1014 aaKnown RBP12.32□□□□□ -0.44
MRPS35-201ENST00000081029 STAT3P40763 770 aa12.32□□□□□ -0.44
MRPS35-201ENST00000081029 ZNF543Q08ER8 600 aa12.32□□□□□ -0.44
MRPS35-201ENST00000081029 CCDC174Q6PII3 467 aa12.32□□□□□ -0.44
MRPS35-201ENST00000081029 RUFY3Q7L099 469 aa12.32□□□□□ -0.44
MRPS35-201ENST00000081029 FAM160B2Q86V87 743 aa12.32□□□□□ -0.44
MRPS35-201ENST00000081029 RAB11FIP4Q86YS3 637 aa12.32□□□□□ -0.44
MRPS35-201ENST00000081029 TMEM87BQ96K49 555 aa12.32□□□□□ -0.44
MRPS35-201ENST00000081029 MOV10L1Q9BXT6 1211 aaKnown RBP12.32□□□□□ -0.44
MRPS35-201ENST00000081029 LY9Q9HBG7 655 aa12.32□□□□□ -0.44
MRPS35-201ENST00000081029 PDRG1Q9NUG6 133 aa12.32□□□□□ -0.44
MRPS35-201ENST00000081029 PRR12Q9ULL5 1215 aa12.32□□□□□ -0.44
MRPS35-201ENST00000081029 CYP46A1Q9Y6A2 500 aa12.32□□□□□ -0.44
MRPS35-201ENST00000081029 MYPNQ86TC9 1320 aa12.32□□□□□ -0.44
MRPS35-201ENST00000081029 HMGB1P09429 215 aaKnown RBP12.31□□□□□ -0.44
MRPS35-201ENST00000081029 ERCC3P19447 782 aa12.31□□□□□ -0.44
MRPS35-201ENST00000081029 PRKCZQ05513 592 aa12.31□□□□□ -0.44
MRPS35-201ENST00000081029 CCDC144CPQ8IYA2 1237 aa12.31□□□□□ -0.44
MRPS35-201ENST00000081029 TMTC2Q8N394 836 aa12.31□□□□□ -0.44
MRPS35-201ENST00000081029 RAET1EQ8TD07 263 aa12.31□□□□□ -0.44
MRPS35-201ENST00000081029 TMX3Q96JJ7 454 aa12.31□□□□□ -0.44
MRPS35-201ENST00000081029 FOXD4L1Q9NU39 408 aa12.31□□□□□ -0.44
MRPS35-201ENST00000081029 GABRQQ9UN88 632 aa12.31□□□□□ -0.44
MRPS35-201ENST00000081029 ADAMTS5Q9UNA0 930 aa12.31□□□□□ -0.44
MRPS35-201ENST00000081029 ZSWIM8A7E2V4 1837 aa12.31□□□□□ -0.44
MRPS35-201ENST00000081029 SH2B2O14492 632 aaPredicted RBP12.31□□□□□ -0.44
MRPS35-201ENST00000081029 HSP90AA1P07900 732 aaKnown RBP12.31□□□□□ -0.44
MRPS35-201ENST00000081029 RXRAP19793 462 aa12.31□□□□□ -0.44
MRPS35-201ENST00000081029 MAPK4P31152 587 aa12.31□□□□□ -0.44
MRPS35-201ENST00000081029 AK2P54819 239 aa12.31□□□□□ -0.44
MRPS35-201ENST00000081029 EXOSC10Q01780 885 aaKnown RBP12.31□□□□□ -0.44
MRPS35-201ENST00000081029 GPATCH4Q5T3I0 446 aaKnown RBP12.31□□□□□ -0.44
MRPS35-201ENST00000081029 SYDE2Q5VT97 1194 aa12.31□□□□□ -0.44
MRPS35-201ENST00000081029 SNRNP48Q6IEG0 339 aaKnown RBP12.31□□□□□ -0.44
MRPS35-201ENST00000081029 GPR142Q7Z601 462 aa12.31□□□□□ -0.44
MRPS35-201ENST00000081029 STAG2Q8N3U4 1231 aa12.31□□□□□ -0.44
MRPS35-201ENST00000081029 HOMER2Q9NSB8 354 aa12.31□□□□□ -0.44
MRPS35-201ENST00000081029 SRRDQ9UH36 339 aa12.31□□□□□ -0.44
MRPS35-201ENST00000081029 PTPN22Q9Y2R2 807 aa12.31□□□□□ -0.44
MRPS35-201ENST00000081029 SLC12A7Q9Y666 1083 aa12.31□□□□□ -0.44
MRPS35-201ENST00000081029 IVNS1ABPQ9Y6Y0 642 aa12.31□□□□□ -0.44
MRPS35-201ENST00000081029 MYCP01106 439 aaPredicted RBP12.3□□□□□ -0.44
MRPS35-201ENST00000081029 GNRH1P01148 92 aa12.3□□□□□ -0.44
MRPS35-201ENST00000081029 SNHG28P0DPA3 235 aa12.3□□□□□ -0.44
MRPS35-201ENST00000081029 RPS6KB1P23443 525 aa12.3□□□□□ -0.44
MRPS35-201ENST00000081029 FLT3LGP49771 235 aa12.3□□□□□ -0.44
MRPS35-201ENST00000081029 PKN2Q16513 984 aaKnown RBP12.3□□□□□ -0.44
MRPS35-201ENST00000081029 SYNE3Q6ZMZ3 975 aa12.3□□□□□ -0.44
MRPS35-201ENST00000081029 Q6ZUG5 572 aa12.3□□□□□ -0.44
MRPS35-201ENST00000081029 PLEKHH3Q7Z736 793 aa12.3□□□□□ -0.44
MRPS35-201ENST00000081029 ZNF654Q8IZM8 581 aa12.3□□□□□ -0.44
MRPS35-201ENST00000081029 ALDH8A1Q9H2A2 487 aaPredicted RBP12.3□□□□□ -0.44
MRPS35-201ENST00000081029 SLC38A10Q9HBR0 1119 aa12.3□□□□□ -0.44
MRPS35-201ENST00000081029 PTCH2Q9Y6C5 1203 aa12.3□□□□□ -0.44
MRPS35-201ENST00000081029 DOCK3Q8IZD9 2030 aa12.3□□□□□ -0.44
MRPS35-201ENST00000081029 RLFQ13129 1914 aa12.3□□□□□ -0.44
MRPS35-201ENST00000081029 KLRF2D3W0D1 207 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms