RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 B4DLN1 442 aa15.78■□□□□ 0.12
USH1C-201ENST00000005226 ERVV-1B6SEH8 477 aa15.78■□□□□ 0.12
USH1C-201ENST00000005226 SCG2P13521 617 aa15.78■□□□□ 0.12
USH1C-201ENST00000005226 RCAN1P53805 252 aa15.78■□□□□ 0.12
USH1C-201ENST00000005226 CYP27A1Q02318 531 aa15.78■□□□□ 0.12
USH1C-201ENST00000005226 CTCFLQ8NI51 663 aaPredicted RBP15.78■□□□□ 0.12
USH1C-201ENST00000005226 GNL3LQ9NVN8 582 aaKnown RBP15.78■□□□□ 0.12
USH1C-201ENST00000005226 LUC7L2Q9Y383 392 aaKnown RBP15.78■□□□□ 0.12
USH1C-201ENST00000005226 BAZ2AQ9UIF9 1905 aaKnown RBP15.78■□□□□ 0.12
USH1C-201ENST00000005226 STRCP1A6NGW2 1772 aa15.78■□□□□ 0.12
USH1C-201ENST00000005226 C3orf67Q6ZVT6 689 aa15.77■□□□□ 0.12
USH1C-201ENST00000005226 TRAPPC11Q7Z392 1133 aa15.77■□□□□ 0.12
USH1C-201ENST00000005226 MTA3Q9BTC8 594 aa15.77■□□□□ 0.12
USH1C-201ENST00000005226 RSPH14Q9UHP6 348 aa15.77■□□□□ 0.12
USH1C-201ENST00000005226 BMP15O95972 392 aa15.77■□□□□ 0.11
USH1C-201ENST00000005226 IL6STP40189 918 aaPredicted RBP15.77■□□□□ 0.11
USH1C-201ENST00000005226 TUBB2AQ13885 445 aa15.77■□□□□ 0.11
USH1C-201ENST00000005226 CCDC152Q4G0S7 254 aa15.77■□□□□ 0.11
USH1C-201ENST00000005226 SRLQ86TD4 932 aa15.77■□□□□ 0.11
USH1C-201ENST00000005226 CCDC148Q8NFR7 591 aa15.77■□□□□ 0.11
USH1C-201ENST00000005226 LRRC15Q8TF66 581 aa15.77■□□□□ 0.11
USH1C-201ENST00000005226 TUBB2BQ9BVA1 445 aa15.77■□□□□ 0.11
USH1C-201ENST00000005226 TMEM60Q9H2L4 133 aa15.77■□□□□ 0.11
USH1C-201ENST00000005226 RBM28Q9NW13 759 aaKnown RBP15.77■□□□□ 0.11
USH1C-201ENST00000005226 NIP7Q9Y221 180 aaKnown RBP eCLIP15.77■□□□□ 0.11
USH1C-201ENST00000005226 NUP98P52948 1817 aa15.77■□□□□ 0.11
USH1C-201ENST00000005226 COL4A1P02462 1669 aa15.76■□□□□ 0.11
USH1C-201ENST00000005226 MYBL2P10244 700 aa15.76■□□□□ 0.11
USH1C-201ENST00000005226 USP14P54578 494 aa15.76■□□□□ 0.11
USH1C-201ENST00000005226 SPAG1Q07617 926 aa15.76■□□□□ 0.11
USH1C-201ENST00000005226 NAALADL2Q58DX5 795 aa15.76■□□□□ 0.11
USH1C-201ENST00000005226 ADSSL1Q8N142 457 aa15.76■□□□□ 0.11
USH1C-201ENST00000005226 C4orf32Q8N8J7 132 aa15.76■□□□□ 0.11
USH1C-201ENST00000005226 CWC15Q9P013 229 aaKnown RBP15.76■□□□□ 0.11
USH1C-201ENST00000005226 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.76■□□□□ 0.11
USH1C-201ENST00000005226 PDE2AO00408 941 aaPredicted RBP15.76■□□□□ 0.11
USH1C-201ENST00000005226 SYF2O95926 243 aaKnown RBP15.76■□□□□ 0.11
USH1C-201ENST00000005226 KLRK1P26718 216 aa15.76■□□□□ 0.11
USH1C-201ENST00000005226 PPP2R5BQ15173 497 aa15.76■□□□□ 0.11
USH1C-201ENST00000005226 LRRC31Q6UY01 552 aa15.76■□□□□ 0.11
USH1C-201ENST00000005226 KIAA1328Q86T90 577 aa15.76■□□□□ 0.11
USH1C-201ENST00000005226 SMCR8Q8TEV9 937 aaPredicted RBP15.76■□□□□ 0.11
USH1C-201ENST00000005226 TRIM47Q96LD4 638 aa15.76■□□□□ 0.11
USH1C-201ENST00000005226 RASSF4Q9H2L5 321 aa15.76■□□□□ 0.11
USH1C-201ENST00000005226 SAR1BQ9Y6B6 198 aa15.76■□□□□ 0.11
USH1C-201ENST00000005226 MACROD2A1Z1Q3 448 aa15.75■□□□□ 0.11
USH1C-201ENST00000005226 RNF40O75150 1001 aa15.75■□□□□ 0.11
USH1C-201ENST00000005226 TYW1BQ6NUM6 668 aa15.75■□□□□ 0.11
USH1C-201ENST00000005226 STAG2Q8N3U4 1231 aa15.75■□□□□ 0.11
USH1C-201ENST00000005226 RASSF10A6NK89 507 aa15.75■□□□□ 0.11
USH1C-201ENST00000005226 H7C1D1 291 aa15.75■□□□□ 0.11
USH1C-201ENST00000005226 COL1A1P02452 1464 aaPredicted RBP15.75■□□□□ 0.11
USH1C-201ENST00000005226 SMIM5Q71RC9 77 aa15.75■□□□□ 0.11
USH1C-201ENST00000005226 BCL9LQ86UU0 1499 aa15.75■□□□□ 0.11
USH1C-201ENST00000005226 HPS3Q969F9 1004 aa15.75■□□□□ 0.11
USH1C-201ENST00000005226 PCMTD1Q96MG8 357 aaPredicted RBP15.75■□□□□ 0.11
USH1C-201ENST00000005226 MYO1AQ9UBC5 1043 aa15.75■□□□□ 0.11
USH1C-201ENST00000005226 BCORQ6W2J9 1755 aa15.75■□□□□ 0.11
USH1C-201ENST00000005226 LGALS16A8MUM7 142 aa15.74■□□□□ 0.11
USH1C-201ENST00000005226 EIF5P55010 431 aaKnown RBP15.74■□□□□ 0.11
USH1C-201ENST00000005226 INTS5Q6P9B9 1019 aaKnown RBP15.74■□□□□ 0.11
USH1C-201ENST00000005226 KRT26Q7Z3Y9 468 aa15.74■□□□□ 0.11
USH1C-201ENST00000005226 FAM71BQ8TC56 605 aa15.74■□□□□ 0.11
USH1C-201ENST00000005226 ZNF507Q8TCN5 953 aa15.74■□□□□ 0.11
USH1C-201ENST00000005226 DRC1Q96MC2 740 aa15.74■□□□□ 0.11
USH1C-201ENST00000005226 GBP3Q9H0R5 595 aa15.74■□□□□ 0.11
USH1C-201ENST00000005226 RABEP2Q9H5N1 569 aa15.74■□□□□ 0.11
USH1C-201ENST00000005226 DOCK2Q92608 1830 aa15.74■□□□□ 0.11
USH1C-201ENST00000005226 ERCC3P19447 782 aa15.74■□□□□ 0.11
USH1C-201ENST00000005226 C2orf54Q08AI8 447 aa15.74■□□□□ 0.11
USH1C-201ENST00000005226 PFKFB3Q16875 520 aaPredicted RBP15.74■□□□□ 0.11
USH1C-201ENST00000005226 WDR93Q6P2C0 686 aa15.74■□□□□ 0.11
USH1C-201ENST00000005226 JAKMIP2Q96AA8 810 aa15.74■□□□□ 0.11
USH1C-201ENST00000005226 ACSBG1Q96GR2 724 aa15.74■□□□□ 0.11
USH1C-201ENST00000005226 PSMD14O00487 310 aa15.74■□□□□ 0.11
USH1C-201ENST00000005226 PLEKP08567 350 aaPredicted RBP15.74■□□□□ 0.11
USH1C-201ENST00000005226 TRIM14Q14142 442 aa15.74■□□□□ 0.11
USH1C-201ENST00000005226 EZH2Q15910 746 aaKnown RBP15.74■□□□□ 0.11
USH1C-201ENST00000005226 INF2Q27J81 1249 aa15.74■□□□□ 0.11
USH1C-201ENST00000005226 TSR1Q2NL82 804 aaKnown RBP15.74■□□□□ 0.11
USH1C-201ENST00000005226 FKBP15Q5T1M5 1219 aa15.74■□□□□ 0.11
USH1C-201ENST00000005226 BLIDQ8IZY5 108 aa15.74■□□□□ 0.11
USH1C-201ENST00000005226 CAGE1Q8TC20 777 aa15.74■□□□□ 0.11
USH1C-201ENST00000005226 CPVLQ9H3G5 476 aa15.74■□□□□ 0.11
USH1C-201ENST00000005226 HAUS4Q9H6D7 363 aa15.74■□□□□ 0.11
USH1C-201ENST00000005226 DISC1Q9NRI5 854 aa15.74■□□□□ 0.11
USH1C-201ENST00000005226 RMND1Q9NWS8 449 aa15.74■□□□□ 0.11
USH1C-201ENST00000005226 BCL9O00512 1426 aa15.73■□□□□ 0.11
USH1C-201ENST00000005226 KLRC4O43908 158 aa15.73■□□□□ 0.11
USH1C-201ENST00000005226 CALM1P0DP23 149 aa15.73■□□□□ 0.11
USH1C-201ENST00000005226 CALM2P0DP24 149 aa15.73■□□□□ 0.11
USH1C-201ENST00000005226 CALM3P0DP25 149 aa15.73■□□□□ 0.11
USH1C-201ENST00000005226 PSMB7Q99436 277 aa15.73■□□□□ 0.11
USH1C-201ENST00000005226 DNAJC7Q99615 494 aa15.73■□□□□ 0.11
USH1C-201ENST00000005226 TFCP2L1Q9NZI6 479 aa15.73■□□□□ 0.11
USH1C-201ENST00000005226 SLAIN2Q9P270 581 aa15.73■□□□□ 0.11
USH1C-201ENST00000005226 HPCAL4Q9UM19 191 aa15.73■□□□□ 0.11
USH1C-201ENST00000005226 CAPN11Q9UMQ6 739 aa15.73■□□□□ 0.11
USH1C-201ENST00000005226 TSPY2A6NKD2 308 aa15.73■□□□□ 0.11
USH1C-201ENST00000005226 DDAH1O94760 285 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms