RNA–Protein interactions for RNA: ENST00000002596.5

HS3ST1-201, Transcript of heparan sulfate-glucosamine 3-sulfotransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HS3ST1, Length 8,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST1-201ENST00000002596 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.55□□□□□ -0.24
HS3ST1-201ENST00000002596 RNF113AO15541 343 aaKnown RBP13.54□□□□□ -0.24
HS3ST1-201ENST00000002596 IGHDP01880 384 aa13.54□□□□□ -0.24
HS3ST1-201ENST00000002596 TRPC6Q9Y210 931 aa13.54□□□□□ -0.24
HS3ST1-201ENST00000002596 TOPBP1Q92547 1522 aa13.54□□□□□ -0.24
HS3ST1-201ENST00000002596 BNIP3LO60238 219 aa13.54□□□□□ -0.24
HS3ST1-201ENST00000002596 AP1ARQ63HQ0 302 aa13.54□□□□□ -0.24
HS3ST1-201ENST00000002596 KSR2Q6VAB6 950 aa13.54□□□□□ -0.24
HS3ST1-201ENST00000002596 DNM3Q9UQ16 869 aa13.54□□□□□ -0.24
HS3ST1-201ENST00000002596 DENND4BO75064 1496 aaPredicted RBP13.54□□□□□ -0.24
HS3ST1-201ENST00000002596 POLR2DO15514 142 aaKnown RBP13.54□□□□□ -0.24
HS3ST1-201ENST00000002596 ALDH1L1O75891 902 aa13.54□□□□□ -0.24
HS3ST1-201ENST00000002596 UFL1O94874 794 aa13.54□□□□□ -0.24
HS3ST1-201ENST00000002596 GFAPP14136 432 aa13.54□□□□□ -0.24
HS3ST1-201ENST00000002596 ARHGAP25P42331 645 aa13.54□□□□□ -0.24
HS3ST1-201ENST00000002596 DPY19L2Q6NUT2 758 aa13.54□□□□□ -0.24
HS3ST1-201ENST00000002596 DDX17Q92841 729 aaKnown RBP13.54□□□□□ -0.24
HS3ST1-201ENST00000002596 C6orf203Q9P0P8 240 aaPredicted RBP13.54□□□□□ -0.24
HS3ST1-201ENST00000002596 PRKAG2Q9UGJ0 569 aa13.54□□□□□ -0.24
HS3ST1-201ENST00000002596 RAPGEF5Q92565 580 aa13.54□□□□□ -0.24
HS3ST1-201ENST00000002596 AS3MTQ9HBK9 375 aa13.54□□□□□ -0.24
HS3ST1-201ENST00000002596 PARP2Q9UGN5 583 aa13.54□□□□□ -0.24
HS3ST1-201ENST00000002596 CCPG1Q9ULG6 757 aa13.54□□□□□ -0.24
HS3ST1-201ENST00000002596 ACEP12821 1306 aa13.54□□□□□ -0.24
HS3ST1-201ENST00000002596 PABPC4Q13310 644 aaKnown RBP eCLIP13.54□□□□□ -0.24
HS3ST1-201ENST00000002596 SNX1Q13596 522 aa13.54□□□□□ -0.24
HS3ST1-201ENST00000002596 ORC4O43929 436 aa13.54□□□□□ -0.24
HS3ST1-201ENST00000002596 PDZD4Q76G19 769 aaPredicted RBP13.54□□□□□ -0.24
HS3ST1-201ENST00000002596 B4GALNT2Q8NHY0 566 aa13.54□□□□□ -0.24
HS3ST1-201ENST00000002596 ARHGEF9O43307 516 aa13.53□□□□□ -0.24
HS3ST1-201ENST00000002596 CEP104O60308 925 aa13.53□□□□□ -0.24
HS3ST1-201ENST00000002596 PHBP35232 272 aa13.53□□□□□ -0.24
HS3ST1-201ENST00000002596 TAGAPQ8N103 731 aa13.53□□□□□ -0.24
HS3ST1-201ENST00000002596 SYNRGQ9UMZ2 1314 aa13.53□□□□□ -0.24
HS3ST1-201ENST00000002596 TUBB2AQ13885 445 aa13.53□□□□□ -0.24
HS3ST1-201ENST00000002596 CALCRLQ16602 461 aa13.53□□□□□ -0.24
HS3ST1-201ENST00000002596 TJAP1Q5JTD0 557 aa13.53□□□□□ -0.24
HS3ST1-201ENST00000002596 LMBR1LQ6UX01 489 aa13.53□□□□□ -0.24
HS3ST1-201ENST00000002596 TUBB2BQ9BVA1 445 aa13.53□□□□□ -0.24
HS3ST1-201ENST00000002596 MIS12Q9H081 205 aa13.53□□□□□ -0.24
HS3ST1-201ENST00000002596 INTUQ9ULD6 942 aa13.53□□□□□ -0.24
HS3ST1-201ENST00000002596 MAD1L1Q9Y6D9 718 aa13.53□□□□□ -0.24
HS3ST1-201ENST00000002596 LIG3P49916 1009 aa13.53□□□□□ -0.24
HS3ST1-201ENST00000002596 KAZNQ674X7 775 aa13.53□□□□□ -0.24
HS3ST1-201ENST00000002596 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.53□□□□□ -0.24
HS3ST1-201ENST00000002596 BBOF1Q8ND07 529 aa13.53□□□□□ -0.24
HS3ST1-201ENST00000002596 LMTK3Q96Q04 1460 aa13.53□□□□□ -0.24
HS3ST1-201ENST00000002596 CAPN11Q9UMQ6 739 aa13.53□□□□□ -0.24
HS3ST1-201ENST00000002596 LAMC3Q9Y6N6 1575 aa13.53□□□□□ -0.24
HS3ST1-201ENST00000002596 CARSP49589 748 aaKnown RBP13.53□□□□□ -0.24
HS3ST1-201ENST00000002596 LARGE2Q8N3Y3 721 aa13.53□□□□□ -0.24
HS3ST1-201ENST00000002596 MBIPQ9NS73 344 aa13.53□□□□□ -0.24
HS3ST1-201ENST00000002596 PAGR1Q9BTK6 254 aa13.53□□□□□ -0.24
HS3ST1-201ENST00000002596 FAN1Q9Y2M0 1017 aa13.53□□□□□ -0.24
HS3ST1-201ENST00000002596 RAD50Q92878 1312 aa13.53□□□□□ -0.24
HS3ST1-201ENST00000002596 ZSCAN9O15535 394 aaPredicted RBP13.53□□□□□ -0.24
HS3ST1-201ENST00000002596 IFNB1P01574 187 aa13.53□□□□□ -0.24
HS3ST1-201ENST00000002596 POLR2BP30876 1174 aaKnown RBP13.53□□□□□ -0.24
HS3ST1-201ENST00000002596 YARSP54577 528 aaKnown RBP13.53□□□□□ -0.24
HS3ST1-201ENST00000002596 HPS4Q9NQG7 708 aa13.53□□□□□ -0.24
HS3ST1-201ENST00000002596 ZNF263O14978 683 aa13.53□□□□□ -0.24
HS3ST1-201ENST00000002596 PPFIA4O75335 1185 aa13.53□□□□□ -0.24
HS3ST1-201ENST00000002596 TROVE2P10155 538 aaKnown RBP eCLIP13.53□□□□□ -0.24
HS3ST1-201ENST00000002596 MYL5Q02045 173 aa13.53□□□□□ -0.24
HS3ST1-201ENST00000002596 SLC9C1Q4G0N8 1177 aa13.53□□□□□ -0.24
HS3ST1-201ENST00000002596 MYCT1Q8N699 235 aa13.53□□□□□ -0.24
HS3ST1-201ENST00000002596 PPIP5K1Q6PFW1 1433 aa13.52□□□□□ -0.24
HS3ST1-201ENST00000002596 TNRQ92752 1358 aa13.52□□□□□ -0.24
HS3ST1-201ENST00000002596 AK2P54819 239 aa13.52□□□□□ -0.24
HS3ST1-201ENST00000002596 VCPP55072 806 aaKnown RBP13.52□□□□□ -0.24
HS3ST1-201ENST00000002596 NONOQ15233 471 aaKnown RBP eCLIP13.52□□□□□ -0.24
HS3ST1-201ENST00000002596 CARD6Q9BX69 1037 aa13.52□□□□□ -0.24
HS3ST1-201ENST00000002596 TPCN1Q9ULQ1 816 aa13.52□□□□□ -0.24
HS3ST1-201ENST00000002596 STX2P32856 288 aa13.52□□□□□ -0.24
HS3ST1-201ENST00000002596 LRMPQ12912 555 aa13.52□□□□□ -0.24
HS3ST1-201ENST00000002596 TNFAIP1Q13829 316 aa13.52□□□□□ -0.24
HS3ST1-201ENST00000002596 P3H4Q92791 437 aa13.52□□□□□ -0.24
HS3ST1-201ENST00000002596 FANCAO15360 1455 aa13.52□□□□□ -0.24
HS3ST1-201ENST00000002596 SKIP12755 728 aa13.52□□□□□ -0.25
HS3ST1-201ENST00000002596 ALDH1B1P30837 517 aa13.52□□□□□ -0.25
HS3ST1-201ENST00000002596 PUM3Q15397 648 aaKnown RBP13.52□□□□□ -0.25
HS3ST1-201ENST00000002596 LVRNQ6Q4G3 990 aa13.52□□□□□ -0.25
HS3ST1-201ENST00000002596 CDC37L1Q7L3B6 337 aa13.52□□□□□ -0.25
HS3ST1-201ENST00000002596 TRIML2Q8N7C3 387 aa13.52□□□□□ -0.25
HS3ST1-201ENST00000002596 GDAP1L1Q96MZ0 367 aa13.52□□□□□ -0.25
HS3ST1-201ENST00000002596 E9PMD0 336 aa13.52□□□□□ -0.25
HS3ST1-201ENST00000002596 KRT14P02533 472 aa13.52□□□□□ -0.25
HS3ST1-201ENST00000002596 CCDC87Q9NVE4 849 aa13.52□□□□□ -0.25
HS3ST1-201ENST00000002596 SCINQ9Y6U3 715 aa13.52□□□□□ -0.25
HS3ST1-201ENST00000002596 FLOT1O75955 427 aa13.52□□□□□ -0.25
HS3ST1-201ENST00000002596 LMNB1P20700 586 aa13.52□□□□□ -0.25
HS3ST1-201ENST00000002596 SLC1A4P43007 532 aa13.52□□□□□ -0.25
HS3ST1-201ENST00000002596 GNPTABQ3T906 1256 aa13.52□□□□□ -0.25
HS3ST1-201ENST00000002596 KHDRBS2Q5VWX1 349 aaKnown RBP13.52□□□□□ -0.25
HS3ST1-201ENST00000002596 FBXL13Q8NEE6 735 aa13.52□□□□□ -0.25
HS3ST1-201ENST00000002596 SECISBP2LQ93073 1101 aaKnown RBP13.52□□□□□ -0.25
HS3ST1-201ENST00000002596 MMS19Q96T76 1030 aa13.52□□□□□ -0.25
HS3ST1-201ENST00000002596 PLCH2O75038 1416 aa13.52□□□□□ -0.25
HS3ST1-201ENST00000002596 GOLGA8QA0A0J9YX86 632 aa13.52□□□□□ -0.25
HS3ST1-201ENST00000002596 GOLGA8OA6NCC3 632 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms