RNA–Protein interactions for RNA: ENSMUST00000196908.4

Pdlim5-209, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,196 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-209ENSMUST00000196908 Pdcd6ipQ9WU78 869 aaKnown RBP10.28□□□□□ -0.76
Pdlim5-209ENSMUST00000196908 Epb41l3Q9WV92 929 aa10.28□□□□□ -0.76
Pdlim5-209ENSMUST00000196908 Col20a1Q923P0 1320 aa10.28□□□□□ -0.76
Pdlim5-209ENSMUST00000196908 Rexo5D3YW29 759 aa10.27□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Gm10093D3YYI8 482 aa10.27□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Ankrd35E9Q9D8 996 aa10.27□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Hdac1O09106 482 aaKnown RBP10.27□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Prl7d1P04769 244 aa10.27□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Pgk2P09041 417 aa10.27□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Fgd1P52734 960 aa10.27□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Sox9Q04887 507 aa10.27□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Plekha7Q3UIL6 1118 aaKnown RBP10.27□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 GnptabQ69ZN6 1235 aa10.27□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Mum1Q6DID5 682 aa10.27□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Entpd3Q8BFW6 529 aa10.27□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Cnksr3Q8BMA3 555 aa10.27□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Ift57Q8BXG3 429 aa10.27□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Myl6bQ8CI43 207 aa10.27□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Slc18a1Q8R090 521 aa10.27□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Lamb1P02469 1786 aa10.26□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Rabgap1A2AWA9 1064 aa10.26□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 DgkhD3YXJ0 1156 aa10.26□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Capn2O08529 700 aa10.26□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Gnai2P08752 355 aaKnown RBP10.26□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Vcam1P29533 739 aa10.26□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Lman2lP59481 347 aa10.26□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Miga1Q4QQM5 600 aa10.26□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Dalrd3Q6PJN8 538 aa10.26□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Phtf2Q8CB19 747 aa10.26□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Stn1Q8K2X3 378 aa10.26□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Inpp5bQ8K337 993 aa10.26□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Pdlim2Q8R1G6 349 aa10.26□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 HibadhQ99L13 335 aaKnown RBP10.26□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 CenppQ9CZ92 286 aa10.26□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Atg4a-psA0A0G2JFS9 396 aa10.25□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Anapc15-psA0A140T8L6 141 aa10.25□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Pet2A2AHY8 747 aa10.25□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Ccdc146E9Q9F7 977 aa10.25□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Syn1O88935 706 aa10.25□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Bmp8aP34821 399 aa10.25□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Timm10P62073 90 aa10.25□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Ppp4cP97470 307 aa10.25□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Atp8b2P98199 1209 aa10.25□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 KhnynQ80U38 671 aa10.25□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Ube3cQ80U95 1083 aa10.25□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Atg4aQ8C9S8 396 aa10.25□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Apbb1ipQ8R5A3 670 aa10.25□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Srgap1Q91Z69 1062 aa10.25□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Alg13Q9D8C3 1166 aaKnown RBP10.25□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Nek4Q9Z1J2 792 aa10.25□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Kdm3aQ6PCM1 1323 aa10.25□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Lrrc37aB1AWG4 3215 aa10.24□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Gm44511A0A0N4SW10 223 aa10.24□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Man1b1A2AJ15 658 aa10.24□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Nfx1B1AY10 1114 aaKnown RBP10.24□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Mmp8O70138 465 aa10.24□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Aldh1a1P24549 501 aa10.24□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Klrb1bP27812 223 aa10.24□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Hoxc10P31257 342 aa10.24□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Inpp5jP59644 1003 aa10.24□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Qrich1Q3UA37 777 aa10.24□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Tmem87bQ8BKU8 555 aa10.24□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Slc9a7Q8BLV3 726 aa10.24□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Scfd2Q8BTY8 684 aa10.24□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Foxe1Q8R2I0 371 aa10.24□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 AclyQ91V92 1091 aaKnown RBP10.24□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Smarca5Q91ZW3 1051 aaKnown RBP10.24□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Spred2Q924S7 410 aa10.24□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Wfdc11A2A5H7 82 aa10.23□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Pa2g4P50580 394 aaKnown RBP10.23□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Hmgcs2P54869 508 aa10.23□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Ecm1Q61508 559 aa10.23□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Sp4Q62445 782 aa10.23□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Rbm34Q8C5L7 375 aaKnown RBP10.23□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Rbm28Q8CGC6 750 aaKnown RBP10.23□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Tbc1d23Q8K0F1 684 aa10.23□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Stard7Q8R1R3 373 aa10.23□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 CenpsQ9D084 142 aa10.23□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Mxra8Q9DBV4 442 aa10.23□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Sh2b2Q9JID9 621 aa10.23□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 PrelpQ9JK53 378 aa10.23□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Nphp1Q9QY53 687 aa10.23□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Galk1Q9R0N0 392 aa10.23□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Cntnap4Q99P47 1310 aa10.23□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Lamb2Q61292 1799 aa10.23□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Supt3B0QZW4 406 aa10.22□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Rhox13F6YCR7 232 aa10.22□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Nucb1Q02819 459 aaKnown RBP10.22□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Grxcr1Q50H32 290 aa10.22□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Supt20hQ7TT00 530 aaKnown RBP10.22□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Gga3Q8BMI3 718 aa10.22□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Ppfibp1Q8C8U0 969 aaKnown RBP10.22□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 OplahQ8K010 1288 aa10.22□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Ppp1r42Q8R1Z4 357 aa10.22□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Ppp6r3Q922D4 844 aa10.22□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Bcl11aQ9QYE3 773 aa10.22□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Gys1Q9Z1E4 738 aaKnown RBP10.22□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Usp31E9Q6Y8 1344 aa10.22□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Obsl1D3YYU8 1804 aaKnown RBP10.21□□□□□ -0.77
Pdlim5-209ENSMUST00000196908 Myh14Q6URW6 2000 aa10.21□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 39 ms