RNA–Protein interactions for RNA: ENSMUST00000192557.1

Pcdh20-202, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 3,362 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-202ENSMUST00000192557 Lrrc8aQ80WG5 810 aa12.18□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Klhl30Q8C3F7 581 aa12.18□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Pspc1Q8R326 523 aaKnown RBP12.18□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Ankrd1Q9CR42 319 aa12.18□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Scrn1Q9CZC8 414 aa12.18□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Cbx6Q9DBY5 414 aa12.18□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Ptgs1P22437 602 aa12.17□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Brip1Q5SXJ3 1174 aa12.17□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Mtss1lQ6P9S0 715 aa12.17□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Ankk1Q8BZ25 745 aa12.17□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Ccz1Q8C1Y8 480 aa12.17□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Mboat7Q8CHK3 473 aa12.17□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Shtn1Q8K2Q9 631 aa12.17□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Filip1Q9CS72 1211 aa12.17□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Calml3Q9D6P8 149 aa12.17□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Krt78E9Q0F0 1068 aa12.17□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Gna11P21278 359 aa12.17□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Nucb2P81117 420 aa12.17□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Slc7a1Q09143 622 aa12.17□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Jakmip3Q5DTN8 844 aa12.17□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 RragbQ6NTA4 374 aa12.17□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Hdac4Q6NZM9 1076 aa12.17□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Spire2Q8K1S6 718 aa12.17□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Dnai2A2AC93 623 aa12.16□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Diaph1O08808 1255 aa12.16□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Mybl2P48972 704 aa12.16□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Scaf8Q6DID3 1268 aa12.16□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Taf6lQ8R2K4 616 aa12.16□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Lzts2Q91YU6 671 aa12.16□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 EhhadhQ9DBM2 718 aa12.16□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Ecm29Q6PDI5 1840 aa12.16□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Lrrc32G3XA59 663 aa12.16□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Aco1P28271 889 aaKnown RBP12.16□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Trappc10Q3TLI0 1259 aa12.16□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Cnga2Q62398 664 aa12.16□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 WaplQ65Z40 1200 aaKnown RBP12.16□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Pdcl2Q78Y63 240 aa12.16□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Tmem39bQ810L4 492 aa12.16□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Inpp5bQ8K337 993 aa12.16□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Trub2Q91WG3 331 aaKnown RBP12.16□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Trex1Q91XB0 314 aa12.16□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Kctd10Q922M3 315 aa12.16□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 TbcbQ9D1E6 244 aa12.16□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Sertad1Q9JL10 236 aa12.16□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 RdxP26043 583 aaKnown RBP12.16□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Tpm2P58774 284 aa12.16□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 PRAG1Q571I4 1179 aa12.16□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 GypcQ78HU7 95 aa12.16□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Txndc16Q7TN22 820 aa12.16□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Necab1Q8BG18 352 aa12.16□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Gnl2Q99LH1 728 aaKnown RBP12.16□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Mmtag2Q99LX5 260 aaKnown RBP12.16□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Borcs6Q9D6W8 360 aa12.16□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 PpardP35396 440 aa12.15□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 KhsrpQ3U0V1 748 aaKnown RBP12.15□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Lca5Q80ST9 704 aa12.15□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Arhgef19Q8BWA8 802 aa12.15□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 PaoxQ8C0L6 504 aa12.15□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 SltmQ8CH25 1031 aaKnown RBP12.15□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 GlyctkQ8QZY2 523 aa12.15□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Ccdc94Q9D6J3 314 aa12.15□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Ccnt1Q9QWV9 724 aaKnown RBP12.15□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Dctpp1Q9QY93 170 aa12.15□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Gm5114W4VSN8 858 aa12.15□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Zfp853A0A1D5RM95 733 aa12.15□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Ccdc6D3YZP9 469 aa12.15□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Slc27a3O88561 667 aa12.15□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 CnpP16330 420 aa12.15□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Nek1P51954 1203 aa12.15□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Tbc1d31Q6NXY1 996 aa12.15□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Taf1dQ9D4V4 322 aa12.15□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Sorbs3Q9R1Z8 733 aa12.15□□□□□ -0.46
Pcdh20-202ENSMUST00000192557 Nup188Q6ZQH8 1759 aa12.15□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Dnaaf5B9EJR8 853 aa12.15□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Klrg2Q3UM83 387 aa12.15□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Slc10a5Q5PT54 434 aa12.15□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Lmbrd1Q8K0B2 537 aa12.15□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 E2f4Q8R0K9 410 aa12.15□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Hs2st1Q8R3H7 356 aa12.15□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Ppp2r5dQ91V89 594 aa12.15□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Thap2Q9D305 217 aa12.15□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Snrnp35Q9D384 244 aa12.15□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 2310002L09RikQ9D7L5 217 aa12.15□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 UncxO08934 530 aa12.14□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Zdhhc14Q8BQQ1 489 aa12.14□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Nlrp5Q9R1M5 1163 aa12.14□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Dock5B2RY04 1868 aa12.14□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Arhgap4B1AUY3 965 aa12.14□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Samd1D3YXK1 519 aa12.14□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Tpm3P21107 285 aaKnown RBP12.14□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Tal1P22091 329 aa12.14□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Wdr70Q3TWF6 657 aa12.14□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Tigd5Q499M4 642 aa12.14□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Hoxa13Q62424 386 aa12.14□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Sp4Q62445 782 aa12.14□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Ms4a5Q810P8 197 aa12.14□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Inpp4aQ9EPW0 939 aa12.14□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Btaf1E9QAE3 1848 aa12.14□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Ccna1Q61456 421 aa12.13□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Apbb1ipQ8R5A3 670 aa12.13□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 17.3 ms