RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Ndufa8Q9DCJ5 172 aa20.01■□□□□ 0.79
Trim71-201ENSMUST00000111816 Ftl1P29391 183 aa20■□□□□ 0.79
Trim71-201ENSMUST00000111816 Terf1P70371 421 aa20■□□□□ 0.79
Trim71-201ENSMUST00000111816 Pde4cQ3UEI1 686 aa20■□□□□ 0.79
Trim71-201ENSMUST00000111816 Mybl2P48972 704 aa20■□□□□ 0.79
Trim71-201ENSMUST00000111816 Agap2Q3UHD9 1186 aa20■□□□□ 0.79
Trim71-201ENSMUST00000111816 Arhgap31A6X8Z5 1425 aa20■□□□□ 0.79
Trim71-201ENSMUST00000111816 Bach2P97303 839 aa20■□□□□ 0.79
Trim71-201ENSMUST00000111816 Cog4Q8R1U1 785 aa20■□□□□ 0.79
Trim71-201ENSMUST00000111816 Ppp1r13bQ62415 1087 aa20■□□□□ 0.79
Trim71-201ENSMUST00000111816 Polr2bQ8CFI7 1174 aaKnown RBP20■□□□□ 0.79
Trim71-201ENSMUST00000111816 Plcb4Q91UZ1 1175 aa20■□□□□ 0.79
Trim71-201ENSMUST00000111816 Catsper2A2ARP9 588 aa20■□□□□ 0.79
Trim71-201ENSMUST00000111816 Zmym1Q3TJB1 983 aa20■□□□□ 0.79
Trim71-201ENSMUST00000111816 Gm5169Q5M8P2 212 aa20■□□□□ 0.79
Trim71-201ENSMUST00000111816 Nsfl1cQ9CZ44 370 aaKnown RBP20■□□□□ 0.79
Trim71-201ENSMUST00000111816 Kifc2O08672 792 aa20■□□□□ 0.79
Trim71-201ENSMUST00000111816 Axin1O35625 863 aa20■□□□□ 0.79
Trim71-201ENSMUST00000111816 Art2aP17981 287 aa20■□□□□ 0.79
Trim71-201ENSMUST00000111816 E330017A01RikQ8BU47 192 aa20■□□□□ 0.79
Trim71-201ENSMUST00000111816 Gm14525B1AZA0 212 aa19.99■□□□□ 0.79
Trim71-201ENSMUST00000111816 NsfP46460 744 aa19.99■□□□□ 0.79
Trim71-201ENSMUST00000111816 Trim80Q3V061 624 aa19.99■□□□□ 0.79
Trim71-201ENSMUST00000111816 Nacc1Q7TSZ8 514 aa19.99■□□□□ 0.79
Trim71-201ENSMUST00000111816 D130040H23RikQ8BII3 405 aa19.99■□□□□ 0.79
Trim71-201ENSMUST00000111816 Tbl3Q8C4J7 801 aaKnown RBP19.99■□□□□ 0.79
Trim71-201ENSMUST00000111816 Ankrd42Q3V096 527 aa19.99■□□□□ 0.79
Trim71-201ENSMUST00000111816 WhammQ571B6 793 aa19.99■□□□□ 0.79
Trim71-201ENSMUST00000111816 Dnajb7Q9QYI8 312 aa19.99■□□□□ 0.79
Trim71-201ENSMUST00000111816 Azi2Q9QYP6 405 aa19.99■□□□□ 0.79
Trim71-201ENSMUST00000111816 Krr1Q8BGA5 380 aaKnown RBP19.99■□□□□ 0.79
Trim71-201ENSMUST00000111816 Hif1aQ61221 836 aaKnown RBP19.99■□□□□ 0.79
Trim71-201ENSMUST00000111816 Tigd4Q8BUZ3 513 aa19.99■□□□□ 0.79
Trim71-201ENSMUST00000111816 Tshz3Q8CGV9 1081 aa19.99■□□□□ 0.79
Trim71-201ENSMUST00000111816 Terf2ipQ91VL8 393 aa19.99■□□□□ 0.79
Trim71-201ENSMUST00000111816 Naa16Q9DBB4 864 aa19.99■□□□□ 0.79
Trim71-201ENSMUST00000111816 Pik3caP42337 1068 aa19.99■□□□□ 0.79
Trim71-201ENSMUST00000111816 Drp2Q05AA6 957 aa19.99■□□□□ 0.79
Trim71-201ENSMUST00000111816 MycbpapQ5SUV2 932 aa19.99■□□□□ 0.79
Trim71-201ENSMUST00000111816 AdpgkQ8VDL4 496 aa19.99■□□□□ 0.79
Trim71-201ENSMUST00000111816 Casq2O09161 415 aa19.99■□□□□ 0.79
Trim71-201ENSMUST00000111816 Tcp1P11983 556 aaKnown RBP19.99■□□□□ 0.79
Trim71-201ENSMUST00000111816 Gm2012B1B0R1 212 aa19.98■□□□□ 0.79
Trim71-201ENSMUST00000111816 Mroh9G5E8L9 891 aa19.98■□□□□ 0.79
Trim71-201ENSMUST00000111816 Mtmr10Q7TPM9 771 aa19.98■□□□□ 0.79
Trim71-201ENSMUST00000111816 Ncaph2Q8BSP2 607 aa19.98■□□□□ 0.79
Trim71-201ENSMUST00000111816 Q8VDP2 222 aa19.98■□□□□ 0.79
Trim71-201ENSMUST00000111816 Gm1661E9Q963 441 aa19.98■□□□□ 0.79
Trim71-201ENSMUST00000111816 Palb2Q3U0P1 1104 aa19.98■□□□□ 0.79
Trim71-201ENSMUST00000111816 RpainQ9CWY9 219 aa19.98■□□□□ 0.79
Trim71-201ENSMUST00000111816 SelenovD3YXG1 328 aa19.98■□□□□ 0.79
Trim71-201ENSMUST00000111816 Gm1043A0A140LJC2 1431 aa19.98■□□□□ 0.79
Trim71-201ENSMUST00000111816 YwhahP68510 246 aaKnown RBP19.98■□□□□ 0.79
Trim71-201ENSMUST00000111816 Slx4ipQ9D7Y9 413 aa19.98■□□□□ 0.79
Trim71-201ENSMUST00000111816 Chd3B1AR17 2055 aa19.98■□□□□ 0.79
Trim71-201ENSMUST00000111816 TprnA2AI08 749 aaKnown RBP19.98■□□□□ 0.79
Trim71-201ENSMUST00000111816 PapolaQ61183 739 aa19.98■□□□□ 0.79
Trim71-201ENSMUST00000111816 Gm21083A0A0G2JFD5 256 aa19.98■□□□□ 0.79
Trim71-201ENSMUST00000111816 Pank2Q3U4S0 443 aa19.98■□□□□ 0.79
Trim71-201ENSMUST00000111816 Ppp2r5aQ6PD03 486 aa19.98■□□□□ 0.79
Trim71-201ENSMUST00000111816 Afap1Q80YS6 731 aa19.98■□□□□ 0.79
Trim71-201ENSMUST00000111816 Pdxdc1Q99K01 787 aaKnown RBP19.98■□□□□ 0.79
Trim71-201ENSMUST00000111816 LdhaP06151 332 aaKnown RBP19.97■□□□□ 0.79
Trim71-201ENSMUST00000111816 Cab39Q06138 341 aa19.97■□□□□ 0.79
Trim71-201ENSMUST00000111816 Znf697Q569E7 569 aa19.97■□□□□ 0.79
Trim71-201ENSMUST00000111816 Klhl38Q8BSF5 581 aa19.97■□□□□ 0.79
Trim71-201ENSMUST00000111816 Snx19Q6P4T1 997 aa19.97■□□□□ 0.79
Trim71-201ENSMUST00000111816 Tiam1Q60610 1591 aa19.97■□□□□ 0.79
Trim71-201ENSMUST00000111816 MpndQ3TV65 487 aa19.97■□□□□ 0.79
Trim71-201ENSMUST00000111816 Glg1Q61543 1175 aaKnown RBP19.97■□□□□ 0.79
Trim71-201ENSMUST00000111816 Sh3gl1Q62419 368 aa19.97■□□□□ 0.79
Trim71-201ENSMUST00000111816 Lzts2Q91YU6 671 aa19.97■□□□□ 0.79
Trim71-201ENSMUST00000111816 Sh2d4aQ9D7V1 421 aa19.97■□□□□ 0.79
Trim71-201ENSMUST00000111816 Tor4aQ8BH02 426 aa19.97■□□□□ 0.79
Trim71-201ENSMUST00000111816 Zfp202Q8C879 641 aa19.97■□□□□ 0.79
Trim71-201ENSMUST00000111816 Snapc4Q8BP86 1333 aa19.97■□□□□ 0.79
Trim71-201ENSMUST00000111816 Wdr93Q402B2 695 aa19.97■□□□□ 0.79
Trim71-201ENSMUST00000111816 Dnajc25A2ALW5 357 aa19.97■□□□□ 0.79
Trim71-201ENSMUST00000111816 Ccdc88cQ6VGS5 2009 aa19.97■□□□□ 0.79
Trim71-201ENSMUST00000111816 Cfap61Q8CEL2 1252 aa19.97■□□□□ 0.79
Trim71-201ENSMUST00000111816 PudpQ9D5U5 234 aa19.97■□□□□ 0.79
Trim71-201ENSMUST00000111816 Dnm2P39054 870 aaKnown RBP19.97■□□□□ 0.79
Trim71-201ENSMUST00000111816 Nol11Q8BJW5 723 aaKnown RBP19.97■□□□□ 0.79
Trim71-201ENSMUST00000111816 Gimap7Q8R379 293 aa19.97■□□□□ 0.79
Trim71-201ENSMUST00000111816 Snx5Q9D8U8 404 aa19.96■□□□□ 0.79
Trim71-201ENSMUST00000111816 Angptl2Q9R045 493 aa19.96■□□□□ 0.79
Trim71-201ENSMUST00000111816 Sesn1P58006 492 aa19.96■□□□□ 0.79
Trim71-201ENSMUST00000111816 Crnkl1P63154 690 aaKnown RBP19.96■□□□□ 0.79
Trim71-201ENSMUST00000111816 LzicQ8K3C3 190 aa19.96■□□□□ 0.79
Trim71-201ENSMUST00000111816 Tsc22d1P62500 1077 aa19.96■□□□□ 0.79
Trim71-201ENSMUST00000111816 Caprin1Q60865 707 aaKnown RBP19.96■□□□□ 0.79
Trim71-201ENSMUST00000111816 Snx30Q8CE50 437 aa19.96■□□□□ 0.79
Trim71-201ENSMUST00000111816 Sash1P59808 1230 aa19.96■□□□□ 0.79
Trim71-201ENSMUST00000111816 Ska2Q9CR46 120 aa19.96■□□□□ 0.79
Trim71-201ENSMUST00000111816 KynuQ9CXF0 464 aa19.96■□□□□ 0.79
Trim71-201ENSMUST00000111816 Krt32Q62168 407 aa19.96■□□□□ 0.79
Trim71-201ENSMUST00000111816 NelfbQ8C4Y3 580 aa19.95■□□□□ 0.78
Trim71-201ENSMUST00000111816 Prpsap1Q9D0M1 356 aa19.95■□□□□ 0.78
Trim71-201ENSMUST00000111816 Rsbn1lD3Z0K6 821 aa19.95■□□□□ 0.78
Trim71-201ENSMUST00000111816 Ankrd44B2RXR6 993 aa19.95■□□□□ 0.78
Retrieved 100 of 22,080 RNA–protein pairs in 21.5 ms