RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Arrdc4A0A0B4J1F4 415 aa11.37□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Gucy1a2F8VQK3 730 aa11.37□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Gm21969J3QJZ1 289 aa11.37□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Eepd1Q3TGW2 569 aa11.37□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Peg10Q7TN75 958 aaKnown RBP11.37□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Fbxo10Q7TQF2 950 aa11.37□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Nod2Q8K3Z0 1020 aa11.37□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Ccar2Q8VDP4 922 aaKnown RBP11.37□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Zcchc17Q9ESX4 241 aaKnown RBP11.37□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Usp17ldG5E8G2 545 aa11.37□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Usp17lcG5E8I7 545 aa11.37□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Il13ra2O88786 383 aa11.37□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Gna11P21278 359 aa11.37□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Atoh1P48985 351 aa11.37□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Rgl1Q60695 768 aa11.37□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Znf653Q6YND2 615 aa11.37□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Siglec10Q80ZE3 688 aa11.37□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Adgra1Q8C4G9 578 aa11.37□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Ero1bQ8R2E9 467 aa11.37□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Atp5c1Q91VR2 298 aaKnown RBP11.37□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Il21rQ9JHX3 529 aa11.37□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Nlrp5Q9R1M5 1163 aa11.37□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Lamb1P02469 1786 aa11.37□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Tpd52l1O54818 204 aa11.37□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Ddit3P35639 168 aa11.37□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Stim2P83093 746 aa11.37□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Gm5114W4VSN8 858 aa11.37□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Myh8P13542 1937 aa11.37□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 MyocO70624 490 aa11.36□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Ccnd3P30282 292 aa11.36□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Atp11aP98197 1187 aa11.36□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Tshz1Q5DTH5 1084 aa11.36□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Bco2Q99NF1 532 aa11.36□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Slc5a5Q99PN0 618 aa11.36□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Nr2e3Q9QXZ7 395 aa11.36□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 GdaQ9R111 454 aa11.36□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Cd22P35329 862 aa11.36□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Atp1a3Q6PIC6 1013 aa11.36□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Dusp9Q7TNL7 452 aa11.36□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Galnt17Q7TT15 598 aa11.36□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Pgrmc2Q80UU9 217 aaKnown RBP11.36□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Slc4a7Q8BTY2 1034 aa11.36□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Plcd1Q8R3B1 756 aa11.36□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Ces1Q8VCC2 565 aa11.36□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 AdpgkQ8VDL4 496 aa11.36□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Hnrnpul1Q8VDM6 859 aaKnown RBP11.36□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 TbcbQ9D1E6 244 aa11.36□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Ccdc88aQ5SNZ0 1873 aa11.36□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Tmem132bF7BAB2 1078 aa11.36□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Traf1P39428 409 aa11.36□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Cyp2e1Q05421 493 aa11.36□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Secisbp2lQ6A098 1086 aaKnown RBP11.36□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Trim29Q8R2Q0 587 aa11.36□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Nr3c2Q8VII8 978 aa11.36□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 EhhadhQ9DBM2 718 aa11.36□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Zmynd8A2A484 1235 aaKnown RBP11.35□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Cyp26c1B2RXA7 518 aa11.35□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Phldb3E9QAF4 648 aa11.35□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Kifap3P70188 793 aa11.35□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Casc1Q6TDU8 730 aa11.35□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Depdc1aQ8CIG0 804 aa11.35□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Vps16Q920Q4 839 aa11.35□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Ndufa8Q9DCJ5 172 aa11.35□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Tmod4Q9JLH8 345 aa11.35□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Tjp3Q9QXY1 905 aa11.35□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Ppef1O35655 650 aa11.35□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Parp1P11103 1013 aaKnown RBP11.35□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Wdr93Q402B2 695 aa11.35□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Slc9a1Q61165 820 aa11.35□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Gja3Q64448 417 aa11.35□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Usp17leQ7M764 540 aa11.35□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Samm50Q8BGH2 469 aa11.35□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Antxr1Q9CZ52 562 aa11.35□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Fsip1Q9D3V5 435 aa11.35□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Cul5Q9D5V5 780 aa11.35□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Api5O35841 504 aaKnown RBP11.34□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 C87499Q3UX49 493 aa11.34□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Apobec3Q99J72 440 aaKnown RBP11.34□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Iqca1Q9CUL5 857 aa11.34□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Ktn1Q61595 1327 aaKnown RBP11.34□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Disp2Q8CIP5 1345 aa11.34□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Gm7356A0A087WSA6 508 aa11.34□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Rfpl4bJ3QPR6 266 aa11.34□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Arl14Q3SXC5 192 aa11.34□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Ptger2Q62053 362 aa11.34□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Sap130Q8BIH0 1057 aa11.34□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Serpinb13Q8CDC0 389 aa11.34□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Cmtm5Q9D6G9 156 aa11.34□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Serpinb2P12388 415 aa11.34□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Nap1l2P51860 460 aa11.34□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Rbm46P86049 533 aa11.34□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Olfm4Q3UZZ4 505 aa11.34□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Smc2Q8CG48 1191 aaKnown RBP11.34□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Krt82Q99M74 516 aa11.34□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 PdhbQ9D051 359 aa11.34□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Sptlc2P97363 560 aaKnown RBP11.33□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Gm28047Q3US59 414 aa11.33□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Usp28Q5I043 1051 aa11.33□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Dlg1Q811D0 905 aaKnown RBP11.33□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Nup88Q8CEC0 753 aaKnown RBP11.33□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms