RNA–Protein interactions for RNA: ENSMUST00000076313.12

Prpf40a-201, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40a, Length 7,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-201ENSMUST00000076313 Add3Q9QYB5 706 aaKnown RBP10.27□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Npc1l1Q6T3U4 1333 aa10.27□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Elmsan1E9Q2I4 1089 aaKnown RBP10.27□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Zbtb38Q3LR78 1197 aa10.27□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 CopeO89079 308 aa10.27□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 IvlP48997 467 aa10.27□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Gas7Q60780 421 aa10.27□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 DbnlQ62418 436 aa10.27□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Atp2a3Q64518 1038 aa10.27□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Pja2Q80U04 707 aa10.27□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 HscbQ8K3A0 234 aa10.27□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 GlyctkQ8QZY2 523 aa10.27□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Dhx30Q99PU8 1217 aaKnown RBP10.27□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 H2-OaQ9QWV1 250 aa10.27□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Gm14525B1AZA0 212 aa10.27□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Gm2012B1B0R1 212 aa10.27□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Ccdc24E9PUW8 296 aa10.27□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Scaf1Q5U4C3 1256 aaKnown RBP10.27□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Gm14819Q62478 212 aa10.27□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Rint1Q8BZ36 792 aa10.27□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 MefvQ9JJ26 767 aa10.27□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Pex11aQ9Z211 246 aa10.27□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Eif4g3Q80XI3 1579 aaKnown RBP10.27□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Krt90E9Q1Z0 538 aa10.27□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Traf5P70191 558 aa10.27□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Arid5bQ8BM75 1188 aaKnown RBP10.27□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Hps4Q99KG7 671 aa10.27□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 A0A1W2P6Q8 802 aa10.27□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Gm9048A0A1W2P7H4 802 aa10.27□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 A0A1W2P7Z8 802 aa10.27□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Gm9046A0A1W2P855 802 aa10.27□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Sec24cG3X972 1096 aaKnown RBP10.27□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 PhbP67778 272 aaKnown RBP10.27□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 C87499Q3UX49 493 aa10.27□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Gm10488Q4KL05 212 aa10.27□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 ErmnQ5EBJ4 281 aa10.27□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Ptpn14Q62130 1189 aa10.27□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Zc3h6Q8BYK8 1177 aa10.27□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Rbm41Q8JZV4 413 aa10.27□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Ophn1Q99J31 802 aa10.27□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Eef1gQ9D8N0 437 aaKnown RBP10.27□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 A0A1Y7VML8 143 aa10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Lmnb2P21619 596 aaKnown RBP10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 GssP51855 474 aa10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Pank4Q80YV4 820 aa10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Morc4Q8BMD7 928 aa10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Myef2Q8C854 591 aaKnown RBP10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Arl8aQ8VEH3 186 aa10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Ssfa2Q922B9 1252 aa10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 DexiQ9WUQ7 95 aa10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Trpm2Q91YD4 1506 aa10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Kdm6aO70546 1401 aa10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Ccdc110Q3V125 848 aa10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Gucy2fQ5SDA5 1108 aa10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Mpp4Q6P7F1 635 aa10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Nlrp5Q9R1M5 1163 aa10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Col17a1Q07563 1470 aa10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 PzpQ61838 1495 aa10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 H2afzP0C0S6 128 aa10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Xrcc5P27641 732 aa10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Pcif1P59114 706 aa10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 H2afvQ3THW5 128 aa10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Mier3Q3UHF3 551 aa10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Iws1Q8C1D8 766 aa10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Dr1Q91WV0 176 aa10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Efcab6Q6P1E8 1516 aa10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Col20a1Q923P0 1320 aa10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Traf1P39428 409 aa10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 PcQ05920 1178 aa10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Plbd2Q3TCN2 594 aa10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Panx2Q6IMP4 677 aa10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Cadps2Q8BYR5 1297 aa10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Hps3Q91VB4 1002 aa10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Glrx3Q9CQM9 337 aa10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Gipc1Q9Z0G0 333 aa10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Gm43638A0A0J9YU36 694 aa10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Erich2E9Q1A6 463 aa10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Q3TYL0 343 aa10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Clec16aQ80U30 1036 aa10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 CnstQ8CBC4 711 aa10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Fermt3Q8K1B8 665 aa10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Mrpl50Q8VDT9 159 aaKnown RBP10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Ttll7A4Q9F0 912 aa10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Copb2O55029 905 aa10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Tcp11Q01755 566 aa10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Nr1d1Q3UV55 615 aa10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Oxsr1Q6P9R2 527 aa10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 QarsQ8BML9 775 aa10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Foxp4Q9DBY0 795 aaKnown RBP10.26□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Adgrl1Q80TR1 1466 aa10.25□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Atf2P16951 487 aaKnown RBP10.25□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 WaplQ65Z40 1200 aaKnown RBP10.25□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Galnt17Q7TT15 598 aa10.25□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 AacsQ9D2R0 672 aa10.25□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 RabggtaQ9JHK4 567 aa10.25□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 AnkarA2RT91 1465 aa10.25□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Armc3A2AU72 881 aa10.25□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Ccdc85cE9Q6B2 420 aa10.25□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Pde6aP27664 859 aa10.25□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Q3TTJ4 293 aa10.25□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 18.6 ms