RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 Palb2Q3U0P1 1104 aa16.04■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Nab2Q61127 525 aa16.04■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Cnnm4Q69ZF7 771 aa16.04■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 HdlbpQ8VDJ3 1268 aaKnown RBP16.04■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Ptch1Q61115 1434 aa16.04■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Otud7bB2RUR8 840 aa16.04■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Apopt1Q9CQW7 192 aa16.04■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Mbd5B1AYB6 1498 aa16.04■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Sorbs1Q62417 1290 aa16.04■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Epc1Q8C9X6 813 aa16.04■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Stx2Q00262 289 aa16.03■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Zmym1Q3TJB1 983 aa16.03■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Trim42Q9D2H5 723 aa16.03■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 PigoQ9JJI6 1093 aa16.03■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Lcmt1A0A0U1RNF2 332 aa16.03■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Sec24cG3X972 1096 aaKnown RBP16.03■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Lins1Q3U1D0 764 aa16.03■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Abtb2Q7TQI7 1024 aa16.03■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 L3mbtl3Q8BLB7 883 aa16.03■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Bola3Q8CEI1 110 aa16.03■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Psmd6Q99JI4 389 aa16.03■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Gm28360A0A087WR25 190 aa16.03■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Krt13P08730 437 aa16.03■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Art2aP17981 287 aa16.03■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Stmn1P54227 149 aaKnown RBP16.03■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Timm10P62073 90 aa16.03■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Ifit1bl2Q3U687 466 aa16.03■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Ccdc125Q5U465 500 aa16.03■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Ctnna3Q65CL1 895 aa16.03■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Dhx40Q6PE54 779 aaKnown RBP16.03■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Ccdc68Q8BVC4 333 aa16.03■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Slc14a2Q8R4T9 930 aa16.03■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Tmem143Q8VD26 458 aa16.03■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 AlkP97793 1621 aa16.03■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Nup62clA2AG10 272 aa16.03■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Gja8P28236 440 aa16.03■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Adcy8P97490 1249 aa16.03■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Atp2a3Q64518 1038 aa16.03■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 F13a1Q8BH61 732 aa16.03■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Snip1Q8BIZ6 383 aaKnown RBP16.03■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Trim7Q923T7 510 aa16.03■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Thap12Q9CUX1 758 aa16.03■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Rtl9Q32KG4 1339 aa16.03■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Plekhg1F6S200 1446 aa16.03■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Casq2O09161 415 aa16.02■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 GfapP03995 430 aa16.02■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Atf2P16951 487 aaKnown RBP16.02■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Hspd1P63038 573 aaKnown RBP16.02■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Atp11aP98197 1187 aa16.02■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Myl10Q62082 202 aa16.02■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Usp8Q80U87 1080 aa16.02■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Csgalnact2Q8C1F4 542 aa16.02■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 NapaQ9DB05 295 aa16.02■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Eif4g3Q80XI3 1579 aaKnown RBP16.02■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Snx12O70493 165 aa16.02■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Herc4Q6PAV2 1057 aa16.02■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 CoblQ5NBX1 1337 aaKnown RBP16.02■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Sept2P42208 361 aaKnown RBP16.02■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Lrch1P62046 709 aa16.02■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Ufl1Q8CCJ3 793 aaKnown RBP16.02■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Vps37bQ8R0J7 285 aa16.02■□□□□ 0.16
Pcdha1-201ENSMUST00000070797 Usp35M0QWN7 1009 aa16.02■□□□□ 0.15
Pcdha1-201ENSMUST00000070797 Atp8a1P70704 1164 aa16.02■□□□□ 0.15
Pcdha1-201ENSMUST00000070797 Trip13Q3UA06 432 aa16.02■□□□□ 0.15
Pcdha1-201ENSMUST00000070797 Trim80Q3V061 624 aa16.02■□□□□ 0.15
Pcdha1-201ENSMUST00000070797 Fnbp1Q80TY0 616 aa16.02■□□□□ 0.15
Pcdha1-201ENSMUST00000070797 Fbxo18Q8K2I9 1042 aa16.02■□□□□ 0.15
Pcdha1-201ENSMUST00000070797 Ushbp1Q8R370 680 aa16.02■□□□□ 0.15
Pcdha1-201ENSMUST00000070797 Fkbp6Q91XW8 327 aa16.02■□□□□ 0.15
Pcdha1-201ENSMUST00000070797 Catsper1Q91ZR5 686 aa16.02■□□□□ 0.15
Pcdha1-201ENSMUST00000070797 Arl2bpQ9D385 163 aa16.02■□□□□ 0.15
Pcdha1-201ENSMUST00000070797 Nr1i2O54915 431 aa16.02■□□□□ 0.15
Pcdha1-201ENSMUST00000070797 Ap1g2O88512 791 aa16.02■□□□□ 0.15
Pcdha1-201ENSMUST00000070797 Elf1Q60775 612 aa16.02■□□□□ 0.15
Pcdha1-201ENSMUST00000070797 Tmem132eQ6IEE6 982 aa16.02■□□□□ 0.15
Pcdha1-201ENSMUST00000070797 Cep70Q6IQY5 616 aa16.02■□□□□ 0.15
Pcdha1-201ENSMUST00000070797 Ripor2Q80U16 1078 aa16.02■□□□□ 0.15
Pcdha1-201ENSMUST00000070797 Actr5Q80US4 605 aaKnown RBP16.02■□□□□ 0.15
Pcdha1-201ENSMUST00000070797 Bank1Q80VH0 783 aa16.02■□□□□ 0.15
Pcdha1-201ENSMUST00000070797 Clec4gQ8BNX1 294 aa16.02■□□□□ 0.15
Pcdha1-201ENSMUST00000070797 Map3k19E9Q3S4 1311 aa16.01■□□□□ 0.15
Pcdha1-201ENSMUST00000070797 Igsf1Q7TQA1 1317 aa16.01■□□□□ 0.15
Pcdha1-201ENSMUST00000070797 Med14A2ABV5 1459 aaKnown RBP16.01■□□□□ 0.15
Pcdha1-201ENSMUST00000070797 Tmem94Q7TSH8 1360 aa16.01■□□□□ 0.15
Pcdha1-201ENSMUST00000070797 Serpina1bP22599 413 aa16.01■□□□□ 0.15
Pcdha1-201ENSMUST00000070797 Ckap2lQ7TS74 745 aa16.01■□□□□ 0.15
Pcdha1-201ENSMUST00000070797 Nxf7Q80SZ6 620 aaKnown RBP16.01■□□□□ 0.15
Pcdha1-201ENSMUST00000070797 Zc3h6Q8BYK8 1177 aa16.01■□□□□ 0.15
Pcdha1-201ENSMUST00000070797 EhhadhQ9DBM2 718 aa16.01■□□□□ 0.15
Pcdha1-201ENSMUST00000070797 Disp3A3KFU9 1347 aa16.01■□□□□ 0.15
Pcdha1-201ENSMUST00000070797 Mmrn1B2RPV6 1210 aa16.01■□□□□ 0.15
Pcdha1-201ENSMUST00000070797 Myo1eE9Q634 1107 aa16.01■□□□□ 0.15
Pcdha1-201ENSMUST00000070797 Adssl1P28650 457 aa16.01■□□□□ 0.15
Pcdha1-201ENSMUST00000070797 Myo1fP70248 1099 aa16.01■□□□□ 0.15
Pcdha1-201ENSMUST00000070797 Zkscan8Q8BSL0 588 aa16.01■□□□□ 0.15
Pcdha1-201ENSMUST00000070797 Dnajc17Q91WT4 303 aa16.01■□□□□ 0.15
Pcdha1-201ENSMUST00000070797 Utp11Q9CZJ1 253 aaKnown RBP16.01■□□□□ 0.15
Pcdha1-201ENSMUST00000070797 MthfslL7N466 203 aa16.01■□□□□ 0.15
Pcdha1-201ENSMUST00000070797 Olfm3P63056 478 aa16.01■□□□□ 0.15
Pcdha1-201ENSMUST00000070797 Yipf3Q3UDR8 347 aa16.01■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 22.6 ms