RNA–Protein interactions for RNA: ENSMUST00000057525.13

Trim3-201, Transcript of Tripartite motif-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim3, Length 3,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3-201ENSMUST00000057525 Usp49Q6P9L4 685 aa17.47■□□□□ 0.39
Trim3-201ENSMUST00000057525 Trpv1Q704Y3 839 aa17.47■□□□□ 0.39
Trim3-201ENSMUST00000057525 Brd2Q7JJ13 798 aaKnown RBP17.47■□□□□ 0.39
Trim3-201ENSMUST00000057525 Gga3Q8BMI3 718 aa17.47■□□□□ 0.39
Trim3-201ENSMUST00000057525 Gmcl1Q920G9 524 aa17.47■□□□□ 0.39
Trim3-201ENSMUST00000057525 Azi2Q9QYP6 405 aa17.47■□□□□ 0.39
Trim3-201ENSMUST00000057525 Arhgap4B1AUY3 965 aa17.46■□□□□ 0.39
Trim3-201ENSMUST00000057525 Bach1P97302 739 aa17.46■□□□□ 0.39
Trim3-201ENSMUST00000057525 Cyp2e1Q05421 493 aa17.46■□□□□ 0.39
Trim3-201ENSMUST00000057525 Adgrg6Q6F3F9 1165 aa17.46■□□□□ 0.39
Trim3-201ENSMUST00000057525 Haus7Q8BKT8 364 aa17.46■□□□□ 0.39
Trim3-201ENSMUST00000057525 Bri3bpQ8BXV2 253 aa17.46■□□□□ 0.39
Trim3-201ENSMUST00000057525 XdhQ00519 1335 aa17.46■□□□□ 0.39
Trim3-201ENSMUST00000057525 Col2a1P28481 1487 aa17.46■□□□□ 0.39
Trim3-201ENSMUST00000057525 Gm10134F6ZQC6 126 aa17.46■□□□□ 0.39
Trim3-201ENSMUST00000057525 Tpd52l1O54818 204 aa17.46■□□□□ 0.39
Trim3-201ENSMUST00000057525 Tph1P17532 447 aa17.46■□□□□ 0.39
Trim3-201ENSMUST00000057525 Rnf214Q8BFU3 668 aaKnown RBP17.46■□□□□ 0.39
Trim3-201ENSMUST00000057525 PdgfdQ925I7 370 aa17.46■□□□□ 0.39
Trim3-201ENSMUST00000057525 Med4Q9CQA5 270 aa17.46■□□□□ 0.39
Trim3-201ENSMUST00000057525 Yeats4Q9CR11 227 aaKnown RBP17.46■□□□□ 0.39
Trim3-201ENSMUST00000057525 TbcbQ9D1E6 244 aa17.46■□□□□ 0.39
Trim3-201ENSMUST00000057525 Mmp14P53690 582 aa17.45■□□□□ 0.38
Trim3-201ENSMUST00000057525 Pcdhb14Q6PB90 796 aa17.45■□□□□ 0.38
Trim3-201ENSMUST00000057525 Spata21Q8BHW6 681 aa17.45■□□□□ 0.38
Trim3-201ENSMUST00000057525 Zhx2Q8C0C0 836 aaKnown RBP17.45■□□□□ 0.38
Trim3-201ENSMUST00000057525 Iqca1Q9CUL5 857 aa17.45■□□□□ 0.38
Trim3-201ENSMUST00000057525 4931400O07RikQ9D4M5 137 aa17.45■□□□□ 0.38
Trim3-201ENSMUST00000057525 Sapcd2Q9D818 391 aa17.45■□□□□ 0.38
Trim3-201ENSMUST00000057525 Cry2Q9R194 592 aa17.45■□□□□ 0.38
Trim3-201ENSMUST00000057525 Pdcd6ipQ9WU78 869 aaKnown RBP17.45■□□□□ 0.38
Trim3-201ENSMUST00000057525 Dnai2A2AC93 623 aa17.45■□□□□ 0.38
Trim3-201ENSMUST00000057525 Slc10a4Q3UEZ8 437 aa17.45■□□□□ 0.38
Trim3-201ENSMUST00000057525 Pls1Q3V0K9 630 aa17.45■□□□□ 0.38
Trim3-201ENSMUST00000057525 Prpf4bQ61136 1007 aaKnown RBP17.45■□□□□ 0.38
Trim3-201ENSMUST00000057525 Hoxa13Q62424 386 aa17.45■□□□□ 0.38
Trim3-201ENSMUST00000057525 Zcwpw1Q6IR42 630 aa17.45■□□□□ 0.38
Trim3-201ENSMUST00000057525 Gpatch3Q8BIY1 525 aa17.45■□□□□ 0.38
Trim3-201ENSMUST00000057525 Ces1Q8VCC2 565 aa17.45■□□□□ 0.38
Trim3-201ENSMUST00000057525 Washc1Q8VDD8 475 aa17.45■□□□□ 0.38
Trim3-201ENSMUST00000057525 Ampd3O08739 766 aa17.45■□□□□ 0.38
Trim3-201ENSMUST00000057525 Znf219Q6IQX8 726 aa17.45■□□□□ 0.38
Trim3-201ENSMUST00000057525 Ift122Q6NWV3 1182 aa17.45■□□□□ 0.38
Trim3-201ENSMUST00000057525 Dusp9Q7TNL7 452 aa17.45■□□□□ 0.38
Trim3-201ENSMUST00000057525 Depdc1aQ8CIG0 804 aa17.45■□□□□ 0.38
Trim3-201ENSMUST00000057525 Pcdhb15Q91Y04 786 aa17.45■□□□□ 0.38
Trim3-201ENSMUST00000057525 Slc5a5Q99PN0 618 aa17.45■□□□□ 0.38
Trim3-201ENSMUST00000057525 Aldh1b1Q9CZS1 519 aa17.45■□□□□ 0.38
Trim3-201ENSMUST00000057525 Nlrp5Q9R1M5 1163 aa17.45■□□□□ 0.38
Trim3-201ENSMUST00000057525 PparaP23204 468 aa17.44■□□□□ 0.38
Trim3-201ENSMUST00000057525 Fzd9Q9R216 592 aa17.44■□□□□ 0.38
Trim3-201ENSMUST00000057525 Slc39a2G3X943 309 aa17.44■□□□□ 0.38
Trim3-201ENSMUST00000057525 Has3O08650 554 aa17.44■□□□□ 0.38
Trim3-201ENSMUST00000057525 Tnni3kQ5GIG6 834 aa17.44■□□□□ 0.38
Trim3-201ENSMUST00000057525 Fbxo10Q7TQF2 950 aa17.44■□□□□ 0.38
Trim3-201ENSMUST00000057525 Trim11Q99PQ2 467 aa17.44■□□□□ 0.38
Trim3-201ENSMUST00000057525 Sh3bgrQ9WUZ7 214 aa17.44■□□□□ 0.38
Trim3-201ENSMUST00000057525 Mctp1E9PV86 951 aa17.43■□□□□ 0.38
Trim3-201ENSMUST00000057525 Gas2l3Q3UWW6 683 aa17.43■□□□□ 0.38
Trim3-201ENSMUST00000057525 Adgre1Q61549 931 aa17.43■□□□□ 0.38
Trim3-201ENSMUST00000057525 Cnga2Q62398 664 aa17.43■□□□□ 0.38
Trim3-201ENSMUST00000057525 Garem2Q6PAJ3 880 aa17.43■□□□□ 0.38
Trim3-201ENSMUST00000057525 AdpgkQ8VDL4 496 aa17.43■□□□□ 0.38
Trim3-201ENSMUST00000057525 Usp17ldG5E8G2 545 aa17.43■□□□□ 0.38
Trim3-201ENSMUST00000057525 Usp17lcG5E8I7 545 aa17.43■□□□□ 0.38
Trim3-201ENSMUST00000057525 AoahO35298 574 aa17.43■□□□□ 0.38
Trim3-201ENSMUST00000057525 Gna11P21278 359 aa17.43■□□□□ 0.38
Trim3-201ENSMUST00000057525 Fbxo11Q7TPD1 930 aaKnown RBP17.43■□□□□ 0.38
Trim3-201ENSMUST00000057525 Ctdspl2Q8BG15 465 aa17.43■□□□□ 0.38
Trim3-201ENSMUST00000057525 LRWD1Q8BUI3 648 aaKnown RBP17.43■□□□□ 0.38
Trim3-201ENSMUST00000057525 Gprasp2Q8BUY8 826 aa17.43■□□□□ 0.38
Trim3-201ENSMUST00000057525 Zfp853A0A1D5RM95 733 aa17.42■□□□□ 0.38
Trim3-201ENSMUST00000057525 Flot1O08917 428 aa17.42■□□□□ 0.38
Trim3-201ENSMUST00000057525 Api5O35841 504 aaKnown RBP17.42■□□□□ 0.38
Trim3-201ENSMUST00000057525 Peg10Q7TN75 958 aaKnown RBP17.42■□□□□ 0.38
Trim3-201ENSMUST00000057525 Cep85Q8BMK0 761 aa17.42■□□□□ 0.38
Trim3-201ENSMUST00000057525 BaatQ91X34 420 aa17.42■□□□□ 0.38
Trim3-201ENSMUST00000057525 Snw1Q9CSN1 536 aaKnown RBP17.42■□□□□ 0.38
Trim3-201ENSMUST00000057525 LdhbP16125 334 aaKnown RBP17.42■□□□□ 0.38
Trim3-201ENSMUST00000057525 Cbx2P30658 519 aa17.42■□□□□ 0.38
Trim3-201ENSMUST00000057525 Pfkfb1P70266 471 aa17.42■□□□□ 0.38
Trim3-201ENSMUST00000057525 Tshz1Q5DTH5 1084 aa17.42■□□□□ 0.38
Trim3-201ENSMUST00000057525 Galnt17Q7TT15 598 aa17.42■□□□□ 0.38
Trim3-201ENSMUST00000057525 Csrnp2Q8BGQ2 534 aa17.42■□□□□ 0.38
Trim3-201ENSMUST00000057525 Tcp11l1Q8BTG3 509 aa17.42■□□□□ 0.38
Trim3-201ENSMUST00000057525 Angel2Q8K1C0 544 aa17.42■□□□□ 0.38
Trim3-201ENSMUST00000057525 Glipr1l2Q9CQ35 332 aa17.42■□□□□ 0.38
Trim3-201ENSMUST00000057525 Plagl1Q9JLQ4 704 aa17.42■□□□□ 0.38
Trim3-201ENSMUST00000057525 Frmpd4A2AFR3 1320 aa17.42■□□□□ 0.38
Trim3-201ENSMUST00000057525 Cfap58B2RW38 873 aa17.42■□□□□ 0.38
Trim3-201ENSMUST00000057525 Cyp26c1B2RXA7 518 aa17.42■□□□□ 0.38
Trim3-201ENSMUST00000057525 Tex13cD3YU32 604 aa17.42■□□□□ 0.38
Trim3-201ENSMUST00000057525 Cdh15P33146 784 aa17.42■□□□□ 0.38
Trim3-201ENSMUST00000057525 Kctd10Q922M3 315 aa17.42■□□□□ 0.38
Trim3-201ENSMUST00000057525 Cdca7Q9D0M2 382 aa17.42■□□□□ 0.38
Trim3-201ENSMUST00000057525 TnmdQ9EP64 317 aa17.42■□□□□ 0.38
Trim3-201ENSMUST00000057525 Pcdh15Q99PJ1 1943 aa17.41■□□□□ 0.38
Trim3-201ENSMUST00000057525 Zscan29E9Q5B4 869 aa17.41■□□□□ 0.38
Trim3-201ENSMUST00000057525 Parp2O88554 559 aa17.41■□□□□ 0.38
Trim3-201ENSMUST00000057525 Aco1P28271 889 aaKnown RBP17.41■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 14.1 ms