RNA–Protein interactions for RNA: ENSMUST00000057438.6

Vcpip1-201, Transcript of Deubiquitinating protein VCIP135, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcpip1, Length 9,749 nt, Biotype protein coding, Subcellular localisation Nucleus, Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1-201ENSMUST00000057438 Myh11O08638 1972 aa13.55□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Ulk4Q3V129 1303 aa13.55□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Gm1661E9Q963 441 aa13.55□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 GfapP03995 430 aa13.55□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Csrnp1P59054 583 aa13.55□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Ppp2r5cQ60996 524 aa13.55□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Bcap29Q61334 240 aa13.55□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Map3k7Q62073 579 aa13.55□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Iqcb1Q8BP00 598 aa13.55□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Ccdc97Q9DBT3 340 aa13.55□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 PdclQ9DBX2 301 aa13.55□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Kif14L0N7N1 1674 aaKnown RBP13.55□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Gas7Q60780 421 aa13.55□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Mfap3Q922T2 349 aa13.55□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Mlh1Q9JK91 760 aa13.55□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 XlrP05531 208 aa13.55□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Ccdc154Q6RUT8 657 aa13.55□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 ThemisQ8BGW0 636 aa13.55□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Abhd8Q8R0P8 439 aa13.55□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Trim5E9PV98 497 aa13.55□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Nop9Q8BMC4 636 aaKnown RBP13.55□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 SmtnQ921U8 923 aa13.55□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 CntrlA2AL36 2334 aa13.55□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Prl7a2O54831 253 aa13.54□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Nr1d1Q3UV55 615 aa13.54□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Zc4h2Q68FG0 224 aa13.54□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Cdc23Q8BGZ4 597 aa13.54□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Rps6ka5Q8C050 863 aa13.54□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Zscan22Q8BGS5 496 aa13.54□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Ppp4r1Q8K2V1 951 aa13.54□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Ttc1Q91Z38 292 aa13.54□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Foxp1P58462 705 aa13.54□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Tpd52Q62393 224 aa13.54□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 VmacQ8BP01 174 aa13.54□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 P3h4Q8K2B0 443 aa13.54□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Dph5Q9CWQ0 281 aa13.54□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 GsnP13020 780 aa13.54□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Hspa1lP16627 641 aa13.54□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 AdkP55264 361 aa13.54□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Tubgcp3P58854 905 aa13.54□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Wdr46Q9Z0H1 622 aaKnown RBP13.54□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Cops6O88545 324 aa13.54□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Scyl2Q8CFE4 930 aa13.54□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Arpp21Q9DCB4 807 aa13.54□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Snx1Q9WV80 522 aa13.54□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Gm7995L7N2E4 160 aa13.54□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Prl3d1P18121 224 aa13.54□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Pfkfb1P70266 471 aa13.54□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Atp8a2P98200 1148 aa13.54□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 ScocQ78YZ6 125 aa13.54□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Palm2Q8BR92 376 aa13.54□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Cbwd1Q8VEH6 393 aa13.54□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Tmco4Q91WU4 631 aa13.53□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Ccdc78D3Z5T1 437 aa13.53□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Prdm1Q60636 856 aa13.53□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Arhgap30Q640N3 1101 aa13.53□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Sec23ipQ6NZC7 998 aa13.53□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Klhl38Q8BSF5 581 aa13.53□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Zkscan8Q8BSL0 588 aa13.53□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Tspan17Q9D7W4 270 aa13.53□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Myh7Q91Z83 1935 aa13.53□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 P2rx5Q3UYI1 455 aa13.53□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Bola2Q8BGS2 86 aa13.53□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Gstt4Q9D4P7 240 aa13.53□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Cul1Q9WTX6 776 aa13.53□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Bin2D3Z6Q9 489 aa13.53□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Kif6E9PX57 802 aa13.53□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Ice2Q3UZ18 988 aaKnown RBP13.53□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Ncoa7Q6DFV7 943 aa13.53□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 GancQ8BVW0 898 aa13.53□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Dr1Q91WV0 176 aa13.53□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Dbn1Q9QXS6 706 aa13.53□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Arhgap42B2RQE8 841 aa13.53□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Zbtb41Q811F1 908 aa13.53□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 PaoxQ8C0L6 504 aa13.53□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Rgs3Q9DC04 966 aa13.53□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Cdk13Q69ZA1 1511 aaKnown RBP13.53□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Scaf1Q5U4C3 1256 aaKnown RBP13.53□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Ankrd45Q810N6 248 aa13.53□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Kat14Q8CID0 779 aa13.53□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Nlrp5Q9R1M5 1163 aa13.53□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Igflr1Q3U4N7 345 aa13.53□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Q4VA45 678 aa13.53□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Arhgef1Q61210 920 aaKnown RBP13.53□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 PicalmQ7M6Y3 660 aaKnown RBP13.53□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Parp14Q2EMV9 1817 aa13.53□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Slc3a2P10852 526 aaKnown RBP13.52□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 1700020D05RikQ99PB1 294 aa13.52□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Fbxo3Q9DC63 480 aa13.52□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Srek1ip1Q4V9W2 153 aa13.52□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Cct8l1Q80YT3 562 aa13.52□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Rad51bO35719 350 aa13.52□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Trappc10Q3TLI0 1259 aa13.52□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Sp4Q62445 782 aa13.52□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Ano8Q6PB70 1060 aa13.52□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 IarsQ8BU30 1262 aa13.52□□□□□ -0.24
Vcpip1-201ENSMUST00000057438 Arhgef10lA2AWP8 1280 aa13.52□□□□□ -0.25
Vcpip1-201ENSMUST00000057438 Cfap70D3YVL2 1141 aa13.52□□□□□ -0.25
Vcpip1-201ENSMUST00000057438 Tm6sf1P58749 370 aa13.52□□□□□ -0.25
Vcpip1-201ENSMUST00000057438 Stx1bP61264 288 aa13.52□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 30.7 ms