RNA–Protein interactions for RNA: ENSMUST00000056925.15

Col6a3-201, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 10,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-201ENSMUST00000056925 Trip10Q8CJ53 603 aa11.32□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Rnf8Q8VC56 488 aa11.32□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Zkscan3Q91VW9 553 aa11.32□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Slc52a2Q9D8F3 450 aa11.32□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Gpr139Q80UC8 345 aa11.32□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Ccdc87Q8CDL9 855 aa11.32□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Eef1gQ9D8N0 437 aaKnown RBP11.31□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Cyp27a1Q9DBG1 533 aa11.31□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Abcc4E9Q236 1325 aa11.31□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Naif1Q6PFD7 327 aa11.31□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Rccd1Q8BTU7 377 aa11.31□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Cd209bQ8CJ91 325 aa11.31□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Plcb4Q91UZ1 1175 aa11.31□□□□□ -0.6
Col6a3-201ENSMUST00000056925 C1qbpO35658 278 aa11.31□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Gimap7Q8R379 293 aa11.31□□□□□ -0.6
Col6a3-201ENSMUST00000056925 PigoQ9JJI6 1093 aa11.31□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Atf7ipQ7TT18 1306 aa11.31□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Gbp11A9YVJ5 442 aa11.31□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Casq2O09161 415 aa11.31□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Pms2P54279 859 aa11.31□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Nsun2Q1HFZ0 757 aaKnown RBP11.31□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Strip2Q8C9H6 844 aa11.31□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Arhgap31A6X8Z5 1425 aa11.31□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Gcc2Q8CHG3 1679 aa11.31□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Zfp94E9Q6Y4 486 aa11.31□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Stmn3O70166 180 aa11.31□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Tlk1Q8C0V0 766 aa11.31□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Fbxo18Q8K2I9 1042 aa11.31□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Chchd3Q9CRB9 227 aaKnown RBP11.31□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Zbtb17Q60821 794 aa11.31□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Mei4Q8BRM6 389 aa11.31□□□□□ -0.6
Col6a3-201ENSMUST00000056925 9230110C19RikQ8CC70 267 aa11.31□□□□□ -0.6
Col6a3-201ENSMUST00000056925 GptQ8QZR5 496 aa11.31□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Cul1Q9WTX6 776 aa11.31□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Akap17bA2A3V1 959 aa11.31□□□□□ -0.6
Col6a3-201ENSMUST00000056925 XlrP05531 208 aa11.31□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Rtel1Q0VGM9 1203 aa11.31□□□□□ -0.6
Col6a3-201ENSMUST00000056925 TxlngQ8BHN1 524 aa11.31□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Arhgap29Q8CGF1 1266 aa11.31□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Mpp4Q6P7F1 635 aa11.31□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Haus8Q99L00 373 aa11.31□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Tmed2Q9R0Q3 201 aa11.31□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Atp8b2P98199 1209 aa11.3□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Gm14685Q52KH6 695 aa11.3□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Slc14a2Q8R4T9 930 aa11.3□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Nsd3Q6P2L6 1439 aa11.3□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Rsbn1lD3Z0K6 821 aa11.3□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Ap1b1O35643 943 aaKnown RBP11.3□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Cd72P21855 354 aa11.3□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Usp6nlQ80XC3 819 aa11.3□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Golga4Q91VW5 2238 aa11.3□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Spdl1Q923A2 608 aa11.3□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Kdm5aQ3UXZ9 1690 aa11.3□□□□□ -0.6
Col6a3-201ENSMUST00000056925 ZgpatQ8VDM1 511 aa11.3□□□□□ -0.6
Col6a3-201ENSMUST00000056925 CutaQ9CQ89 177 aa11.3□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Rnf14Q9JI90 485 aa11.3□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Nlrp14Q6B966 993 aa11.3□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Wdr91Q7TMQ7 748 aa11.3□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Dph5Q9CWQ0 281 aa11.3□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Lzts3A2AHG0 700 aa11.3□□□□□ -0.6
Col6a3-201ENSMUST00000056925 1700018F24RikB2RW27 314 aa11.3□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Atp8a1P70704 1164 aa11.3□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Cbx8Q9QXV1 362 aa11.3□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Tnip3A0A1D5RMN0 279 aa11.3□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Akr1b10G5E895 316 aa11.3□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Nek1P51954 1203 aa11.3□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Aldh1l2Q8K009 923 aa11.3□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Rdm1Q9CQK3 281 aa11.3□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Gm2012B1B0R1 212 aa11.3□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Kcnh5Q920E3 988 aa11.3□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Gm7298A0A0N4SVU1 1476 aa11.3□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Kdm2bQ6P1G2 1309 aa11.3□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Apba1B2RUJ5 842 aa11.3□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Ppp2r5cQ60996 524 aa11.3□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Krt42Q6IFX2 452 aa11.3□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Afg3l1Q920A7 789 aaKnown RBP11.3□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Trim37Q6PCX9 961 aa11.29□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Fgfr1op2Q9CRA9 253 aa11.29□□□□□ -0.6
Col6a3-201ENSMUST00000056925 DroshaQ5HZJ0 1373 aaKnown RBP11.29□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Svs3aF2Z472 265 aa11.29□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Wdhd1P59328 1117 aa11.29□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Sash1P59808 1230 aa11.29□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Znf280cQ6P3Y5 742 aa11.29□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Prune1Q8BIW1 454 aa11.29□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Ifi35Q9D8C4 286 aa11.29□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Krt18P05784 423 aa11.29□□□□□ -0.6
Col6a3-201ENSMUST00000056925 InaP46660 501 aa11.29□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Ogfod1Q3U0K8 545 aa11.29□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Ctnna3Q65CL1 895 aa11.29□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Ppp2r5aQ6PD03 486 aa11.29□□□□□ -0.6
Col6a3-201ENSMUST00000056925 AdarQ99MU3 1178 aaKnown RBP11.29□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Myl3P09542 204 aa11.29□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Ddx55Q6ZPL9 600 aaKnown RBP11.29□□□□□ -0.6
Col6a3-201ENSMUST00000056925 SybuQ8BHS8 665 aa11.29□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Fam217aQ9D9W6 419 aa11.29□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Rtn3Q9ES97 964 aa11.29□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Mmrn1B2RPV6 1210 aa11.29□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Slc4a1P04919 929 aa11.29□□□□□ -0.6
Col6a3-201ENSMUST00000056925 PparaP23204 468 aa11.29□□□□□ -0.6
Col6a3-201ENSMUST00000056925 Hspa8P63017 646 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 16.8 ms