RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Lmbrd2Q8C561 694 aa18.11■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Tnfrsf10bQ9QZM4 381 aa18.11■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 4933406M09RikG3XA12 479 aa18.11■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Fam133bQ9CVI2 245 aaKnown RBP18.11■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 1700109H08RikQ9D9C0 210 aa18.11■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Pck1Q9Z2V4 622 aa18.11■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Rnaseh1O70338 285 aa18.1■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Caps2Q8BUG5 550 aa18.1■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Gimap9G3X987 291 aa18.1■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 SmtnQ921U8 923 aa18.1■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Lonrf2B2RT44 518 aa18.1■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 InhbaQ04998 424 aa18.1■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Klhl38Q8BSF5 581 aa18.1■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Lig3P97386 1015 aa18.1■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Cbwd1Q8VEH6 393 aa18.1■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Slc13a1Q9JHI4 594 aa18.1■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Cul1Q9WTX6 776 aa18.1■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Ccdc153P0C7Q1 202 aa18.1■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Trappc10Q3TLI0 1259 aa18.1■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Cabp7Q91ZM8 215 aa18.1■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Orc3Q9JK30 715 aaKnown RBP18.1■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Kcng1A2BDX4 514 aa18.1■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Erich2E9Q1A6 463 aa18.1■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Trmt10cQ3UFY8 414 aaKnown RBP18.1■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Mfap3Q922T2 349 aa18.1■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Csrnp1P59054 583 aa18.1■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Agap2Q3UHD9 1186 aa18.1■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 AticQ9CWJ9 592 aaKnown RBP18.1■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Tm6sf1P58749 370 aa18.09■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 6820408C15RikQ8BJX2 354 aa18.09■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Tmem94Q7TSH8 1360 aa18.09■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Sec23ipQ6NZC7 998 aa18.09■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Riox2Q8CD15 465 aa18.09■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Map3k4O08648 1597 aa18.09■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Arhgef10lA2AWP8 1280 aa18.09■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Kat14Q8CID0 779 aa18.09■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Hmgb3O54879 200 aaKnown RBP18.09■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 XlrP05531 208 aa18.09■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Tor4aQ8BH02 426 aa18.09■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Trim16Q99PP9 556 aa18.09■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Nphp4P59240 1425 aa18.09■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Hecw1Q8K4P8 1604 aa18.09■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Tmem60Q8K174 133 aa18.09■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Ppp4r1Q8K2V1 951 aa18.09■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Nlrp1aQ2LKU9 1182 aa18.09■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Cct8l1Q80YT3 562 aa18.09■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Tspan17Q9D7W4 270 aa18.09■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 NsfP46460 744 aa18.09■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Jade1Q6ZPI0 834 aaKnown RBP18.09■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Ccdc78D3Z5T1 437 aa18.08■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Hspa1lP16627 641 aa18.08■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Znf667Q2TL60 609 aa18.08■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Krt32Q62168 407 aa18.08■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Ankrd45Q810N6 248 aa18.08■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Svs3bQ8BZH8 265 aa18.08■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Ppp1r1bQ60829 194 aa18.08■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Nlrp9aQ66X03 949 aa18.08■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Ano8Q6PB70 1060 aa18.08■□□□□ 0.49
Ccdc88a-201ENSMUST00000040182 Serpinb6eI7HJI3 429 aa18.08■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Gm38392E9Q2A2 434 aa18.08■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Gm136Q3V037 328 aa18.08■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Fam81bA0A140LI28 432 aa18.08■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 TxlngQ8BHN1 524 aa18.08■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Ccdc154Q6RUT8 657 aa18.08■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Zkscan8Q8BSL0 588 aa18.08■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Pcdha7Q91Y13 937 aa18.08■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Pde11aP0C1Q2 933 aa18.07■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Clec16aQ80U30 1036 aa18.07■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Daam1Q8BPM0 1077 aa18.07■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Nop9Q8BMC4 636 aaKnown RBP18.07■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Lrrc2Q8VDB8 371 aa18.07■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 NonoQ99K48 473 aaKnown RBP18.07■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Myom2Q14BI5 1463 aa18.07■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Elf1Q60775 612 aa18.07■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Serpinb10Q8K1K6 397 aa18.07■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 GsnP13020 780 aa18.07■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Pfkfb1P70266 471 aa18.07■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Stx2Q00262 289 aa18.07■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Daam2Q80U19 1115 aa18.07■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 HgsQ99LI8 775 aa18.07■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Arpp21Q9DCB4 807 aa18.07■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Znf518aB2RRF6 1478 aaKnown RBP18.07■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Adgrb2Q8CGM1 1561 aa18.07■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Stx1bP61264 288 aa18.07■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Palm2Q8BR92 376 aa18.07■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 IarsQ8BU30 1262 aa18.07■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Foxo3Q9WVH4 672 aa18.07■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Calb1P12658 261 aa18.07■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Arhgef1Q61210 920 aaKnown RBP18.07■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 ScocQ78YZ6 125 aa18.07■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Gstt4Q9D4P7 240 aa18.07■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Setd1bQ8CFT2 1985 aa18.07■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Nr1d1Q3UV55 615 aa18.06■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 GancQ8BVW0 898 aa18.06■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Prc1Q99K43 603 aaKnown RBP18.06■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Card6E9PWH2 1175 aa18.06■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Cadps2Q8BYR5 1297 aa18.06■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 YarsQ91WQ3 528 aaKnown RBP18.06■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Ccdc97Q9DBT3 340 aa18.06■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Kif9Q9WV04 790 aa18.06■□□□□ 0.48
Retrieved 100 of 22,080 RNA–protein pairs in 40.7 ms