RNA–Protein interactions for RNA: ENSMUST00000038665.5

Ptchd1-201, Transcript of Patched domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptchd1, Length 2,768 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd1-201ENSMUST00000038665 Xrcc4Q924T3 326 aa9.58□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Dctpp1Q9QY93 170 aa9.58□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Zfp853A0A1D5RM95 733 aa9.57□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Fam186bD3Z420 943 aa9.57□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 NcapgE9PWG6 1004 aa9.57□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Gdf10P97737 476 aa9.57□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Slc2a13Q3UHK1 637 aa9.57□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Yars2Q8BYL4 472 aaKnown RBP9.57□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Mettl5Q8K1A0 209 aa9.57□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Shtn1Q8K2Q9 631 aa9.57□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Ces1Q8VCC2 565 aa9.57□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Cd248Q91V98 765 aa9.57□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Rrp9Q91WM3 475 aaKnown RBP9.57□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 WaslQ91YD9 501 aa9.57□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Gnl2Q99LH1 728 aaKnown RBP9.57□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Desi2Q9D291 194 aa9.57□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 EhhadhQ9DBM2 718 aa9.57□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Sertad1Q9JL10 236 aa9.57□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Prl2c5Q9JLV9 222 aa9.57□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 PpardP35396 440 aa9.57□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Spata18Q0P557 537 aa9.57□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Prr7Q3V0I2 269 aa9.57□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Tbc1d9bQ5SVR0 1263 aa9.57□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Brip1Q5SXJ3 1174 aa9.57□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 RragbQ6NTA4 374 aa9.57□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Frat2Q8K025 231 aa9.57□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Krt82Q99M74 516 aa9.57□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Cul4bA2A432 970 aaKnown RBP9.56□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Epb41l2O70318 988 aaKnown RBP9.56□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Wdr70Q3TWF6 657 aa9.56□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Akap4Q60662 849 aa9.56□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Cep128Q8BI22 1102 aa9.56□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Ildr1Q8CBR1 537 aa9.56□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Trim29Q8R2Q0 587 aa9.56□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Tmx1Q8VBT0 278 aa9.56□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Myh14Q6URW6 2000 aa9.56□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Zfp831A2ADM8 1628 aa9.56□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Clrn2B2RVW2 232 aa9.56□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Dnajb6O54946 365 aa9.56□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Samsn1P57725 372 aa9.56□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Gse1Q3U3C9 1213 aa9.56□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Adam6bQ6IMH7 756 aa9.56□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Mtss1lQ6P9S0 715 aa9.56□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Dnph1Q80VJ3 173 aa9.56□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 IarsQ8BU30 1262 aa9.56□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 LRWD1Q8BUI3 648 aaKnown RBP9.56□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 2310002L09RikQ9D7L5 217 aa9.56□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Btaf1E9QAE3 1848 aa9.55□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Tex13cD3YU32 604 aa9.55□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Tpm3-rs7D3Z2H9 248 aa9.55□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 PigsQ6PD26 555 aaKnown RBP9.55□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Armc6Q8BNU0 468 aa9.55□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Ints4Q8CIM8 964 aa9.55□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 AdnpQ9Z103 1108 aaKnown RBP9.55□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Mtmr9Q9Z2D0 545 aa9.55□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 CluhQ5SW19 1315 aa9.55□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Lamb1P02469 1786 aa9.55□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Adssl1P28650 457 aa9.55□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Ccna1Q61456 421 aa9.55□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Rasal3Q8C2K5 1041 aa9.55□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Snrnp35Q9D384 244 aa9.55□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Prkab1Q9R078 270 aa9.55□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Ddx23D3Z0M9 819 aaKnown RBP9.54□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Lrrc32G3XA59 663 aa9.54□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 MybP06876 636 aa9.54□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Mx1P09922 631 aa9.54□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Trim30aP15533 496 aa9.54□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 RdxP26043 583 aaKnown RBP9.54□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Eps15P42567 897 aa9.54□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Nedd4P46935 887 aaKnown RBP9.54□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Tpm2P58774 284 aa9.54□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Psmb7P70195 277 aa9.54□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Qrich1Q3UA37 777 aa9.54□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Pdzph1Q8BGR1 1238 aa9.54□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Tmem87aQ8BXN9 555 aa9.54□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Sox30Q8CGW4 782 aa9.54□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Lmbrd1Q8K0B2 537 aa9.54□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Cacnb1Q8R3Z5 597 aa9.54□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Ankrd1Q9CR42 319 aa9.54□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Elf2Q9JHC9 593 aa9.54□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Git2Q9JLQ2 708 aa9.54□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Rgs17Q9QZB0 210 aa9.54□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Nek3Q9R0A5 511 aa9.54□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Ambra1A2AH22 1300 aa9.54□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 AoahO35298 574 aa9.54□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 GnaqP21279 359 aa9.54□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Irf5P56477 497 aa9.54□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Anks1aP59672 1150 aa9.54□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Gabpb2P81069 414 aa9.54□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Cyp2c67Q569X9 491 aa9.54□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Cdc37Q61081 379 aa9.54□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Cnga2Q62398 664 aa9.54□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Cnnm4Q69ZF7 771 aa9.54□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Scaf8Q6DID3 1268 aa9.54□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Ddx31Q6NZQ2 687 aaKnown RBP9.54□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Tmc4Q7TQ65 694 aa9.54□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Ttll1Q91V51 423 aa9.54□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Pcdha12Q91Y18 950 aa9.54□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Ears2Q9CXJ1 523 aa9.54□□□□□ -0.88
Ptchd1-201ENSMUST00000038665 Abcb6Q9DC29 842 aa9.54□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 17.4 ms