RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Copb1Q9JIF7 953 aa14.34□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Chaf1aQ9QWF0 911 aa14.34□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Vmn2r71L7N2D8 855 aa14.33□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Usp5P56399 858 aaKnown RBP14.33□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Gng11P61953 73 aa14.33□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Iqcb1Q8BP00 598 aa14.33□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Adam7O35227 789 aa14.33□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Ccdc102aQ3TMW1 549 aa14.33□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Rhpn1Q61085 643 aa14.33□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Cnga2Q62398 664 aa14.33□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Gpbp1Q6NXH3 473 aaKnown RBP14.33□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Q8C5C9 218 aa14.33□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Hs2st1Q8R3H7 356 aa14.33□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Klrc1Q9Z202 244 aa14.33□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Kif23E9Q5G3 953 aa14.32□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Grem2O88273 168 aa14.32□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Msh3P13705 1091 aa14.32□□□□□ -0.12
Rnf4-201ENSMUST00000030992 NefhP19246 1090 aa14.32□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Uri1Q3TLD5 531 aa14.32□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Trak2Q6P9N8 913 aa14.32□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Spag5Q7TME2 1165 aa14.32□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Tcp11l2Q8K1H7 517 aa14.32□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Trub2Q91WG3 331 aaKnown RBP14.32□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Akap8Q9DBR0 687 aaKnown RBP14.32□□□□□ -0.12
Rnf4-201ENSMUST00000030992 A0A1W2P6Q8 802 aa14.32□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Gm9048A0A1W2P7H4 802 aa14.32□□□□□ -0.12
Rnf4-201ENSMUST00000030992 A0A1W2P7Z8 802 aa14.32□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Gm9046A0A1W2P855 802 aa14.32□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Fam186bD3Z420 943 aa14.32□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Mrps31Q61733 384 aaKnown RBP14.32□□□□□ -0.12
Rnf4-201ENSMUST00000030992 St5Q924W7 1134 aa14.32□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Akt1s1Q9D1F4 257 aa14.32□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Pex3Q9QXY9 372 aa14.32□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Col4a5Q63ZW6 1691 aa14.32□□□□□ -0.12
Rnf4-201ENSMUST00000030992 GalcP54818 684 aa14.32□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Lilrb3P97484 841 aa14.32□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Ccdc122Q8BVN0 290 aa14.32□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Fam53cQ8BXQ8 393 aa14.32□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Gm5114W4VSN8 858 aa14.32□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Scgb2b19J3QM75 112 aa14.31□□□□□ -0.12
Rnf4-201ENSMUST00000030992 LdhaP06151 332 aaKnown RBP14.31□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Fam178bQ24JP3 464 aa14.31□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Tnni3kQ5GIG6 834 aa14.31□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Lamb3Q61087 1168 aa14.31□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Znf532Q6NXK2 1036 aa14.31□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Ankrd13aQ80UP5 588 aa14.31□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Stac3Q8BZ71 360 aa14.31□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Tmem63cQ8CBX0 802 aa14.31□□□□□ -0.12
Rnf4-201ENSMUST00000030992 CpzQ8R4V4 654 aa14.31□□□□□ -0.12
Rnf4-201ENSMUST00000030992 TbcbQ9D1E6 244 aa14.31□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Snrnp35Q9D384 244 aa14.31□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Trmt112Q9DCG9 125 aa14.31□□□□□ -0.12
Rnf4-201ENSMUST00000030992 A430078G23RikE9Q7Y4 484 aa14.31□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Tbc1d2bQ3U0J8 965 aa14.31□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Ccna1Q61456 421 aa14.31□□□□□ -0.12
Rnf4-201ENSMUST00000030992 WdpcpQ8C456 722 aa14.31□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Mboat7Q8CHK3 473 aa14.31□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Ppp1r3gQ9CW07 347 aa14.31□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Ly75Q60767 1723 aa14.3□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Armc3A2AU72 881 aa14.3□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Rsrc2A2RTL5 376 aaKnown RBP14.3□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Vmn2r68L7N2B3 851 aa14.3□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Rad23aP54726 363 aa14.3□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Emc10Q3TAS6 258 aa14.3□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Tm4sf1Q64302 202 aa14.3□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Ncoa7Q6DFV7 943 aa14.3□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Rasgrp4Q8BTM9 673 aa14.3□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Sumf1Q8R0F3 372 aa14.3□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Zbed3Q9D0L1 228 aa14.3□□□□□ -0.12
Rnf4-201ENSMUST00000030992 MymkQ9D1N4 221 aa14.3□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Prl2c5Q9JLV9 222 aa14.3□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Uso1Q9Z1Z0 959 aaKnown RBP14.3□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Gm5580A0A0N4SVP8 411 aa14.3□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Ugt1a8D3Z748 530 aa14.3□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Ugt1a10E9PXN7 530 aa14.3□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Mtss1lQ6P9S0 715 aa14.3□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Ankrd13dQ6PD24 605 aa14.3□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Maats1Q8BRC6 783 aa14.3□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Slc51aQ8R000 340 aa14.3□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Tmem134Q8R0J4 195 aa14.3□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Apol7aB2RT54 418 aa14.29□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Gna11P21278 359 aa14.29□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Arhgef2Q60875 985 aa14.29□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Trim25Q61510 634 aaKnown RBP14.29□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Kcnj11Q61743 390 aa14.29□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Galnt17Q7TT15 598 aa14.29□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Fbxo2Q80UW2 297 aa14.29□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Ulbp1Q8HWA3 334 aa14.29□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Ushbp1Q8R370 680 aa14.29□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Mical1Q8VDP3 1048 aa14.29□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Txnrd3Q99MD6 652 aa14.29□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Arpp21Q9DCB4 807 aa14.29□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Tpp1O89023 562 aa14.29□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Q8CEZ4 452 aa14.29□□□□□ -0.12
Rnf4-201ENSMUST00000030992 ParnQ8VDG3 624 aa14.29□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Mtmr4Q91XS1 1190 aa14.29□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Cabp7Q91ZM8 215 aa14.29□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Mis18aQ9CZJ6 204 aa14.29□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Zranb2Q9R020 330 aaKnown RBP14.29□□□□□ -0.12
Rnf4-201ENSMUST00000030992 Gdf11Q9Z1W4 405 aa14.29□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 47.4 ms