RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Dnajc14Q921R4 703 aa16.93■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Homer1Q9Z2Y3 366 aa16.93■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Aknad1E9Q8N6 675 aa16.93■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Tlr8P58682 1032 aa16.93■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Atxn2lQ7TQH0 1049 aaKnown RBP16.93■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Tbc1d23Q8K0F1 684 aa16.93■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Uap1Q91YN5 522 aa16.93■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Sel1lQ9Z2G6 790 aa16.93■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Calcoco2A2A6M5 331 aa16.92■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Nr1i2O54915 431 aa16.92■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 IkbkbO88351 757 aa16.92■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Abcd1P48410 736 aa16.92■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Krt86P97861 486 aa16.92■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Zfp597E9Q6S0 419 aa16.92■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Ppfibp2O35711 882 aa16.92■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Hgh1Q8C3I8 393 aa16.92■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Ppfibp1Q8C8U0 969 aaKnown RBP16.92■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Tmem63cQ8CBX0 802 aa16.92■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Tmx1Q8VBT0 278 aa16.92■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Pdcd6ipQ9WU78 869 aaKnown RBP16.92■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Akr1c19G3X9Y6 323 aa16.91■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Chp1P61022 195 aa16.91■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Tbc1d2bQ3U0J8 965 aa16.91■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Slc44a4Q91VA1 707 aa16.91■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 PdclQ9DBX2 301 aa16.91■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Ercc4Q9QZD4 917 aa16.91■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Zfp853A0A1D5RM95 733 aa16.91■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Scgb2b19J3QM75 112 aa16.91■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Alppl2P24823 529 aa16.91■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 VrtnQ3SYK4 740 aa16.91■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Nsrp1Q5NCR9 542 aa16.91■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Dlg1Q811D0 905 aaKnown RBP16.91■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Cdc23Q8BGZ4 597 aa16.91■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 LarsQ8BMJ2 1178 aa16.91■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 UvssaQ9D479 717 aa16.91■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Fam217aQ9D9W6 419 aa16.91■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Tfap4Q9JIZ5 338 aa16.91■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Frmpd4A2AFR3 1320 aa16.91■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Sh3bp1P55194 680 aa16.91■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Ppp4cP97470 307 aa16.91■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Eya3P97480 510 aa16.91■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Trub2Q91WG3 331 aaKnown RBP16.91■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Zhx1P70121 873 aa16.9■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Mtss1lQ6P9S0 715 aa16.9■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 TxlnaQ6PAM1 554 aaKnown RBP16.9■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Atp1a2Q6PIE5 1020 aa16.9■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Snd1Q78PY7 910 aaKnown RBP16.9■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Cyp4f39Q8BGU0 532 aa16.9■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Nop9Q8BMC4 636 aaKnown RBP16.9■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Fbxo18Q8K2I9 1042 aa16.9■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Ccdc14Q8K2J4 934 aa16.9■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Ddx23D3Z0M9 819 aaKnown RBP16.9■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 PRAG1Q571I4 1179 aa16.9■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Pip5kl1Q6U7H8 395 aa16.9■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Ctdp1Q7TSG2 960 aa16.9■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Amhr2Q8K592 568 aa16.9■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Myh8P13542 1937 aa16.89■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Pabpc1lA2A5N3 607 aaKnown RBP16.89■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Gm5934D3Z4U6 212 aa16.89■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 DnttP09838 530 aa16.89■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Parp1P11103 1013 aaKnown RBP16.89■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Kcnb1Q03717 857 aa16.89■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Epn1Q80VP1 575 aa16.89■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Hs2st1Q8R3H7 356 aa16.89■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Cdk8Q8R3L8 464 aa16.89■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Ppp2r5dQ91V89 594 aa16.89■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Pcdh11xF6ZNL5 1338 aa16.89■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Cnbd1B1AWM0 430 aa16.89■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Stim1P70302 685 aa16.89■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Znhit6Q3UFB2 460 aaKnown RBP16.89■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Spice1Q8C804 860 aa16.89■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Rassf4Q8CB96 322 aa16.89■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Tmem134Q8R0J4 195 aa16.89■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Cabp7Q91ZM8 215 aa16.89■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Snrnp35Q9D384 244 aa16.89■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Arl6ip4Q9JM93 229 aa16.89■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Rexo5D3YW29 759 aa16.89■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Arid4aF8VPQ2 1261 aaKnown RBP16.89■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Mdh1P14152 334 aa16.89■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Anp32eP97822 260 aaKnown RBP16.89■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 ItpripQ3TNL8 555 aa16.89■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Rrp1bQ91YK2 724 aaKnown RBP16.89■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Hps4Q99KG7 671 aa16.89■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Rasa2P58069 847 aa16.88■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Ccna1Q61456 421 aa16.88■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Zswim4Q8C7B8 1101 aa16.88■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Exoc1Q8R3S6 894 aa16.88■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Slc5a4bQ91ZP4 660 aa16.88■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 MymkQ9D1N4 221 aa16.88■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Mtmr9Q9Z2D0 545 aa16.88■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Gm30191A0A0U1RNT7 187 aa16.88■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Mboat4P0C7A3 435 aa16.88■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 OplahQ8K010 1288 aa16.88■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Lrit1Q8K099 624 aa16.88■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 NapgQ9CWZ7 312 aa16.88■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Prl2c5Q9JLV9 222 aa16.88■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Kif13bA0A286YCV9 1847 aa16.88■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Dnm2P39054 870 aaKnown RBP16.87■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Nkx2-5P42582 318 aa16.87■□□□□ 0.29
Nkx3-1-201ENSMUST00000022646 Map9Q3TRR0 646 aa16.87■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 78.4 ms