RNA–Protein interactions for RNA: ENSMUST00000009885.13

Ubp1-201, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ubp1, Length 3,742 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-201ENSMUST00000009885 Scgb2b19J3QM75 112 aa20.75■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Casp12O08736 419 aa20.75■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Cd3dP04235 173 aa20.75■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Sstr3P30935 428 aa20.75■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Nr1d1Q3UV55 615 aa20.75■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Krt74Q6IFZ9 495 aa20.75■□□□□ 0.91
Ubp1-201ENSMUST00000009885 VmacQ8BP01 174 aa20.75■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Pwp2Q8BU03 919 aaKnown RBP20.75■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Gucy1a2F8VQK3 730 aa20.75■□□□□ 0.91
Ubp1-201ENSMUST00000009885 HelqQ2VPA6 1069 aa20.75■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Ccnl1Q52KE7 532 aaKnown RBP20.75■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Specc1Q5SXY1 1067 aa20.75■□□□□ 0.91
Ubp1-201ENSMUST00000009885 CgasQ8C6L5 507 aa20.75■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Spata2Q8K004 515 aa20.75■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Apobec3Q99J72 440 aaKnown RBP20.75■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Ift20Q61025 132 aa20.74■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Maip1Q8BHE8 291 aa20.74■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Stn1Q8K2X3 378 aa20.74■□□□□ 0.91
Ubp1-201ENSMUST00000009885 TxlnbQ8VBT1 685 aa20.74■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Prpf6Q91YR7 941 aaKnown RBP20.74■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Arpp21Q9DCB4 807 aa20.74■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Mroh6V9GX81 722 aa20.74■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Tet3Q8BG87 1668 aa20.74■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Ptpn23Q6PB44 1692 aa20.74■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Kiaa1211Q5PR69 1207 aa20.74■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Naa15Q80UM3 865 aaKnown RBP20.74■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Rab11fip4Q8BQP8 635 aa20.74■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Dclk3Q8BWQ5 790 aa20.74■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Trerf1Q8BXJ2 1205 aa20.74■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Gpr108Q91WD0 569 aa20.74■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Psma7Q9Z2U0 248 aa20.74■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Trpm3Q5F4S9 1721 aa20.74■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Gm43738A0A0G2JEA5 862 aa20.74■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Casp1P29452 402 aa20.74■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Cep70Q6IQY5 616 aa20.74■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Clca2Q8BG22 942 aa20.74■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Efcab14Q8BGQ6 484 aa20.74■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Rasgrp4Q8BTM9 673 aa20.74■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Olfm5Q8BU90 496 aa20.74■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Tmem143Q8VD26 458 aa20.74■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Pex3Q9QXY9 372 aa20.74■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Prl7d1P04769 244 aa20.73■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Parp1P11103 1013 aaKnown RBP20.73■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Pde4dQ01063 747 aa20.73■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Gm12185Q5NCB2 835 aa20.73■□□□□ 0.91
Ubp1-201ENSMUST00000009885 GphnQ8BUV3 769 aaKnown RBP20.73■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Homer1Q9Z2Y3 366 aa20.73■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Pik3c2aQ61194 1686 aa20.73■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Ctnnd1P30999 938 aaKnown RBP20.73■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Cdh15P33146 784 aa20.73■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Pbx1P41778 430 aa20.73■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Tex35Q14BK3 207 aa20.73■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Tbc1d2bQ3U0J8 965 aa20.73■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Slc51bQ80WK2 128 aa20.73■□□□□ 0.91
Ubp1-201ENSMUST00000009885 AopepQ8BXQ6 817 aa20.73■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Sirt2Q8VDQ8 389 aa20.73■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Eif4a3Q91VC3 411 aaKnown RBP20.73■□□□□ 0.91
Ubp1-201ENSMUST00000009885 PigoQ9JJI6 1093 aa20.73■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Pkd2l2Q9JLG4 621 aa20.73■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Capn15Q9JLG8 1095 aa20.73■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Zc3h13E9Q784 1729 aaKnown RBP20.73■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Ano9P86044 747 aa20.72■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Tcp10aQ80W76 438 aa20.72■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Dnajc5gQ8C632 165 aa20.72■□□□□ 0.91
Ubp1-201ENSMUST00000009885 4930449I24RikQ9D5E3 319 aa20.72■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Arhgap6O54834 987 aa20.72■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Drc1Q3USS3 753 aa20.72■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Q8BWG4 1187 aa20.72■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Armc9Q9D2I5 817 aa20.72■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Lrrn2Q6PHP6 730 aa20.71■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Trap1Q9CQN1 706 aaKnown RBP20.71■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Simc1E9Q6E9 1354 aa20.71■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Arhgap44Q5SSM3 814 aa20.71■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Antxr2Q6DFX2 487 aa20.71■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Exoc3Q6KAR6 755 aa20.71■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Abcf2Q99LE6 628 aaKnown RBP20.71■□□□□ 0.91
Ubp1-201ENSMUST00000009885 TnrQ8BYI9 1358 aa20.71■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Folh1O35409 752 aa20.71■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Sept1P42209 366 aa20.71■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Rassf6Q80UQ2 353 aa20.71■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Asic2Q925H0 512 aa20.71■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Lztr1Q9CQ33 837 aa20.71■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Tcp1P11983 556 aaKnown RBP20.7■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Atf3Q60765 181 aa20.7■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Naa25Q8BWZ3 972 aa20.7■□□□□ 0.91
Ubp1-201ENSMUST00000009885 MeiocA2AG06 965 aa20.7■□□□□ 0.9
Ubp1-201ENSMUST00000009885 E9QMW4 1145 aa20.7■□□□□ 0.9
Ubp1-201ENSMUST00000009885 Ckap2Q3V1H1 664 aa20.7■□□□□ 0.9
Ubp1-201ENSMUST00000009885 Pak2Q8CIN4 524 aa20.7■□□□□ 0.9
Ubp1-201ENSMUST00000009885 Vmn1r218Q8R261 298 aa20.7■□□□□ 0.9
Ubp1-201ENSMUST00000009885 Dhx58Q99J87 678 aa20.7■□□□□ 0.9
Ubp1-201ENSMUST00000009885 Nmt2O70311 529 aa20.7■□□□□ 0.9
Ubp1-201ENSMUST00000009885 Tmod1P49813 359 aa20.7■□□□□ 0.9
Ubp1-201ENSMUST00000009885 Krt42Q6IFX2 452 aa20.7■□□□□ 0.9
Ubp1-201ENSMUST00000009885 Q8BT18 775 aa20.7■□□□□ 0.9
Ubp1-201ENSMUST00000009885 Luc7lQ9CYI4 371 aaKnown RBP20.7■□□□□ 0.9
Ubp1-201ENSMUST00000009885 Ascc1Q9D8Z1 356 aaKnown RBP20.7■□□□□ 0.9
Ubp1-201ENSMUST00000009885 Rnpc3Q3UZ01 514 aaKnown RBP20.69■□□□□ 0.9
Ubp1-201ENSMUST00000009885 Islr2Q5RKR3 745 aa20.69■□□□□ 0.9
Ubp1-201ENSMUST00000009885 Papd7Q6PB75 542 aa20.69■□□□□ 0.9
Retrieved 100 of 22,080 RNA–protein pairs in 13.8 ms