RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Arfgap2Q99K28 520 aa14.15□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Ndufb9Q9CQJ8 179 aa14.15□□□□□ -0.14
Clcn3-201ENSMUST00000004430 SyncQ9EPM5 470 aa14.15□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Alpk3Q924C5 1678 aa14.15□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Ugt1a8D3Z748 530 aa14.15□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Ugt1a10E9PXN7 530 aa14.15□□□□□ -0.14
Clcn3-201ENSMUST00000004430 GnaqP21279 359 aa14.15□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Surf6P70279 355 aaKnown RBP14.15□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Tc2nQ91XT6 489 aa14.15□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Ssfa2Q922B9 1252 aa14.15□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Krt71Q9R0H5 524 aa14.15□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Rbm12b2Q66JV4 834 aaKnown RBP14.15□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Atg9aQ68FE2 551 aa14.15□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Herc4Q6PAV2 1057 aa14.15□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Spata2Q8K004 515 aa14.15□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Syce1Q9D495 329 aa14.15□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Kiaa0232Q80U59 1396 aaKnown RBP14.15□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Cdc27A2A6Q5 825 aa14.15□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Agbl1Q09M05 972 aa14.15□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Anks6Q6GQX6 883 aa14.15□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Traf3ip3Q8C0G2 513 aa14.15□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Dbndd2Q9CRD4 158 aa14.15□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Ube3bQ9ES34 1070 aa14.15□□□□□ -0.14
Clcn3-201ENSMUST00000004430 Psma7Q9Z2U0 248 aa14.15□□□□□ -0.14
Clcn3-201ENSMUST00000004430 4921504E06RikQ8CET2 560 aa14.14□□□□□ -0.15
Clcn3-201ENSMUST00000004430 NapaQ9DB05 295 aa14.14□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Pla2g4aP47713 748 aa14.14□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Eef1dP57776 281 aaKnown RBP14.14□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Tcp10aQ80W76 438 aa14.14□□□□□ -0.15
Clcn3-201ENSMUST00000004430 F13a1Q8BH61 732 aa14.14□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Tmem87aQ8BXN9 555 aa14.14□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Thsd7aQ69ZU6 1645 aa14.14□□□□□ -0.15
Clcn3-201ENSMUST00000004430 4932429P05RikA2ADI4 785 aa14.14□□□□□ -0.15
Clcn3-201ENSMUST00000004430 E9QMW4 1145 aa14.14□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Terf1P70371 421 aa14.14□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Mrps31Q61733 384 aaKnown RBP14.14□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Tmem59lQ7TNI2 337 aa14.14□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Slc51bQ80WK2 128 aa14.14□□□□□ -0.15
Clcn3-201ENSMUST00000004430 LgsnQ8CIX8 563 aa14.14□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Efhd1Q9D4J1 240 aa14.14□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Sstr3P30935 428 aa14.13□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Krt74Q6IFZ9 495 aa14.13□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Pak2Q8CIN4 524 aa14.13□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Cpsf2O35218 782 aaKnown RBP14.13□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Llgl2Q3TJ91 1027 aa14.13□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Tmem109Q3UBX0 243 aa14.13□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Calcoco1Q8CGU1 691 aa14.13□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Cplx3Q8R1B5 158 aa14.13□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Klhl20Q8VCK5 604 aa14.13□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Dph5Q9CWQ0 281 aa14.13□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Mcur1Q9CXD6 340 aa14.13□□□□□ -0.15
Clcn3-201ENSMUST00000004430 4930449I24RikQ9D5E3 319 aa14.13□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Mroh6V9GX81 722 aa14.13□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Cyp2d34L7N463 504 aa14.13□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Cd3dP04235 173 aa14.13□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Traf1P39428 409 aa14.13□□□□□ -0.15
Clcn3-201ENSMUST00000004430 AdkP55264 361 aa14.13□□□□□ -0.15
Clcn3-201ENSMUST00000004430 NeblQ0II04 452 aa14.13□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Acbd5Q5XG73 508 aa14.13□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Wdr44Q6NVE8 915 aa14.13□□□□□ -0.15
Clcn3-201ENSMUST00000004430 PicalmQ7M6Y3 660 aaKnown RBP14.13□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Terb1Q8C0V1 768 aa14.13□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Ctage5Q8R311 779 aa14.13□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Kif17Q99PW8 1038 aa14.13□□□□□ -0.15
Clcn3-201ENSMUST00000004430 CutaQ9CQ89 177 aa14.13□□□□□ -0.15
Clcn3-201ENSMUST00000004430 PdhbQ9D051 359 aa14.13□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Ltb4r2Q9JJL9 360 aa14.13□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Ccnt1Q9QWV9 724 aaKnown RBP14.13□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Gna11P21278 359 aa14.12□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Ctnna1P26231 906 aaKnown RBP14.12□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Spg7Q3ULF4 781 aa14.12□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Sec31aQ3UPL0 1230 aaKnown RBP14.12□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Tmem232Q5K6N0 675 aa14.12□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Lrrc45Q8CIM1 670 aa14.12□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Cacnb1Q8R3Z5 597 aa14.12□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Cyp3a59D3Z2W7 503 aa14.12□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Nmt2O70311 529 aa14.12□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Rps6ka1P18653 724 aa14.12□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Plbd2Q3TCN2 594 aa14.12□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Usp13Q5BKP2 858 aa14.12□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Irak1Q62406 710 aa14.12□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Slc44a1Q6X893 653 aa14.12□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Znf526Q8BI66 675 aa14.12□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Hps6Q8BLY7 805 aa14.12□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Tspyl4Q8VD63 406 aa14.12□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Apopt1Q9CQW7 192 aa14.12□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Krt24A1L317 512 aa14.12□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Ppfia4B8QI36 1187 aa14.12□□□□□ -0.15
Clcn3-201ENSMUST00000004430 1700029H14RikE9PY36 240 aa14.12□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Ccng2O08918 344 aa14.12□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Ctnna3Q65CL1 895 aa14.12□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Cadps2Q8BYR5 1297 aa14.12□□□□□ -0.15
Clcn3-201ENSMUST00000004430 FliiQ9JJ28 1271 aa14.12□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Skor2A7M7C7 1008 aa14.12□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Ddx23D3Z0M9 819 aaKnown RBP14.12□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Acad12D3Z7X0 555 aa14.12□□□□□ -0.15
Clcn3-201ENSMUST00000004430 KaznQ69ZS8 779 aa14.12□□□□□ -0.15
Clcn3-201ENSMUST00000004430 SfpqQ8VIJ6 699 aaKnown RBP14.12□□□□□ -0.15
Clcn3-201ENSMUST00000004430 1700020D05RikQ99PB1 294 aa14.12□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Dbndd1Q9CZ00 160 aa14.12□□□□□ -0.15
Retrieved 100 of 22,080 RNA–protein pairs in 74.1 ms