RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 AlcamQ61490 583 aa10.01□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Klhl14Q69ZK5 630 aa10.01□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Fbxo41Q6NS60 873 aa10.01□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Gpatch8A2A6A1 1505 aa10.01□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Nphp4P59240 1425 aa10.01□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Ccdc78D3Z5T1 437 aa10.01□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Hmgb3O54879 200 aaKnown RBP10.01□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Sema3fO88632 785 aa10.01□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Tmod1P49813 359 aa10.01□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 S100a5P63084 93 aa10.01□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Evi5P97366 809 aa10.01□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Agap2Q3UHD9 1186 aa10.01□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Bola3Q8CEI1 110 aa10.01□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Smc6Q924W5 1097 aa10.01□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 MefvQ9JJ26 767 aa10.01□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Gm9774A0A0A6YVU8 407 aa10.01□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Rasgrf1P27671 1262 aa10.01□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Ccdc33Q3ULW6 985 aa10.01□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Sestd1Q80UK0 696 aa10.01□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Wdr3Q8BHB4 942 aaKnown RBP10.01□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Lrrc2Q8VDB8 371 aa10.01□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 1700013H16RikQ9DAC5 291 aa10.01□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Tmod4Q9JLH8 345 aa10.01□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Pus7B7ZNL8 666 aaKnown RBP10□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Eif6O55135 245 aa10□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Il4rP16382 810 aa10□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Gja8P28236 440 aa10□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 PhexP70669 749 aa10□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 InhbaQ04998 424 aa10□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Ppp1r1bQ60829 194 aa10□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Arhgap30Q640N3 1101 aa10□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Slc44a1Q6X893 653 aa10□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Cplx3Q8R1B5 158 aa10□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Lrrc9Q8CDN9 1456 aa10□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Wdr62Q3U3T8 1523 aa10□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 1700029H14RikE9PY36 240 aa10□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Vti1aO89116 217 aa10□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 OtulinQ3UCV8 352 aa10□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Prpf38aQ4FK66 312 aaKnown RBP10□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Elf1Q60775 612 aa10□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 NfkbibQ60778 359 aa10□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Krt87Q6IMF0 495 aa10□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Msl1Q6PDM1 616 aa10□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Cep104Q80V31 926 aa10□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Rnf168Q80XJ2 565 aa10□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Tmx1Q8VBT0 278 aa10□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Psmd2Q8VDM4 908 aa10□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Osbpl1aQ91XL9 950 aa10□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Pcdha7Q91Y13 937 aa10□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Polr3cQ9D483 533 aa10□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Ube3bQ9ES34 1070 aa10□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Lonrf2B2RT44 518 aa10□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Fam170aQ66LM6 333 aa10□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Prkab2Q6PAM0 271 aa10□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Ccdc169Q8BXX9 214 aa10□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Nrbp2Q91V36 499 aa10□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Pcdha12Q91Y18 950 aa10□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Wdr7Q920I9 1489 aa10□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Cfap70D3YVL2 1141 aa10□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Eef1bO70251 225 aaKnown RBP10□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Stx2Q00262 289 aa10□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Fam47cQ14BE7 430 aa10□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Mier3Q3UHF3 551 aa10□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Apol7eQ3UZ24 369 aa10□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Rcor2Q8C796 523 aa10□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 YarsQ91WQ3 528 aaKnown RBP10□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Diaph3Q9Z207 1171 aa10□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Mtmr7Q9Z2C9 660 aa10□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Mrpl40Q9Z2Q5 206 aa10□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Slc3a2P10852 526 aaKnown RBP9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Rab20P35295 233 aa9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Ftl2P49945 183 aa9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Tfdp1Q08639 410 aa9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Prdm1Q60636 856 aa9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Snip1Q8BIZ6 383 aaKnown RBP9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Mettl24Q8CCB5 363 aa9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Mylk2Q8VCR8 613 aa9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Mfap3Q922T2 349 aa9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Ophn1Q99J31 802 aa9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Bzw1Q9CQC6 419 aaKnown RBP9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Styxl1Q9DAR2 321 aa9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 PzpQ61838 1495 aa9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Rasgrf2P70392 1189 aa9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Ckap2Q3V1H1 664 aa9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Slc27a1Q60714 646 aa9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Atp1a3Q6PIC6 1013 aa9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 E330017A01RikQ8BU47 192 aa9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 MycbpQ9EQS3 103 aa9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 GsdmeQ9Z2D3 512 aa9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Gm6657A0A1B0GRJ3 277 aa9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Prl7a2O54831 253 aa9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Ccdc153P0C7Q1 202 aa9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Il15P48346 162 aa9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Rps8P62242 208 aaKnown RBP9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Eya3P97480 510 aa9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Ddx31Q6NZQ2 687 aaKnown RBP9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Ints4Q8CIM8 964 aa9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Tmem60Q8K174 133 aa9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Gys2Q8VCB3 704 aa9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Catsper1Q91ZR5 686 aa9.99□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms