RNA–Protein interactions for RNA: YPR013C

CMR3, Transcript of Putative zinc finger protein, yeast

Gene CMR3, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMR3	YPR013C	NTR2	P36118	322 aa	Predicted RBP	4.58	□□□□□ -1.68
CMR3	YPR013C	AAP1	P37898	856 aa	Known RBP	4.58	□□□□□ -1.68
CMR3	YPR013C	SEC31	P38968	1273 aa	Known RBP	4.58	□□□□□ -1.68
CMR3	YPR013C	IRC8	P47046	822 aa		4.58	□□□□□ -1.68
CMR3	YPR013C	TWF1	P53250	332 aa		4.58	□□□□□ -1.68
CMR3	YPR013C	BOP3	P53958	396 aa		4.58	□□□□□ -1.68
CMR3	YPR013C	OAZ1	Q02803	292 aa		4.58	□□□□□ -1.68
CMR3	YPR013C	PEX25	Q02969	394 aa		4.58	□□□□□ -1.68
CMR3	YPR013C	GYL1	Q04322	720 aa		4.58	□□□□□ -1.68
CMR3	YPR013C	LUC7	Q07508	261 aa	Predicted RBP	4.58	□□□□□ -1.68
CMR3	YPR013C	SMF3	Q12078	473 aa	Predicted RBP	4.58	□□□□□ -1.68
CMR3	YPR013C	HXK2	P04807	486 aa	Known RBP	4.57	□□□□□ -1.68
CMR3	YPR013C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
CMR3	YPR013C	ADH7	P25377	361 aa		4.57	□□□□□ -1.68
CMR3	YPR013C	URA7	P28274	579 aa	Known RBP	4.57	□□□□□ -1.68
CMR3	YPR013C	HRR25	P29295	494 aa	Known RBP	4.57	□□□□□ -1.68
CMR3	YPR013C	SOF1	P33750	489 aa	Known RBP	4.57	□□□□□ -1.68
CMR3	YPR013C	SEF1	P34228	1148 aa		4.57	□□□□□ -1.68
CMR3	YPR013C	GMH1	P36125	273 aa		4.57	□□□□□ -1.68
CMR3	YPR013C	DIA4	P38705	446 aa	Predicted RBP	4.57	□□□□□ -1.68
CMR3	YPR013C	MRX1	P40050	688 aa		4.57	□□□□□ -1.68
CMR3	YPR013C	ARG2	P40360	574 aa		4.57	□□□□□ -1.68
CMR3	YPR013C	MAF1	P41910	395 aa		4.57	□□□□□ -1.68
CMR3	YPR013C	PMT6	P42934	759 aa		4.57	□□□□□ -1.68
CMR3	YPR013C	PET130	P47065	347 aa		4.57	□□□□□ -1.68
CMR3	YPR013C	RPS7B	P48164	190 aa	Known RBP	4.57	□□□□□ -1.68
CMR3	YPR013C	COG2	P53271	262 aa		4.57	□□□□□ -1.68
CMR3	YPR013C	ADE16	P54113	591 aa	Known RBP	4.57	□□□□□ -1.68
CMR3	YPR013C	MAK10	Q02197	733 aa		4.57	□□□□□ -1.68
CMR3	YPR013C	RSM28	Q03430	361 aa		4.57	□□□□□ -1.68
CMR3	YPR013C	YML053C	Q04978	212 aa		4.57	□□□□□ -1.68
CMR3	YPR013C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
CMR3	YPR013C	YPL191C	Q08930	360 aa		4.57	□□□□□ -1.68
CMR3	YPR013C	MF(ALPHA)1	P01149	165 aa		4.56	□□□□□ -1.68
CMR3	YPR013C	WHI2	P12611	486 aa		4.56	□□□□□ -1.68
CMR3	YPR013C	CLC1	P17891	233 aa		4.56	□□□□□ -1.68
CMR3	YPR013C	SRP54	P20424	541 aa	Known RBP	4.56	□□□□□ -1.68
CMR3	YPR013C	CPR2	P23285	205 aa		4.56	□□□□□ -1.68
CMR3	YPR013C	RNQ1	P25367	405 aa		4.56	□□□□□ -1.68
CMR3	YPR013C	PUP2	P32379	260 aa		4.56	□□□□□ -1.68
CMR3	YPR013C	RPN2	P32565	945 aa	Known RBP	4.56	□□□□□ -1.68
CMR3	YPR013C	MRE11	P32829	692 aa		4.56	□□□□□ -1.68
CMR3	YPR013C	PMT1	P33775	817 aa		4.56	□□□□□ -1.68
CMR3	YPR013C	LHS1	P36016	881 aa		4.56	□□□□□ -1.68
CMR3	YPR013C	TCD2	P36101	447 aa	Known RBP	4.56	□□□□□ -1.68
CMR3	YPR013C	PPS1	P38148	807 aa		4.56	□□□□□ -1.68
CMR3	YPR013C	SUL1	P38359	859 aa		4.56	□□□□□ -1.68
CMR3	YPR013C	PHM8	P40025	321 aa		4.56	□□□□□ -1.68
CMR3	YPR013C	ALG5	P40350	334 aa		4.56	□□□□□ -1.68
CMR3	YPR013C	RPN11	P43588	306 aa	Known RBP	4.56	□□□□□ -1.68
CMR3	YPR013C	DIA3	P52290	468 aa		4.56	□□□□□ -1.68
CMR3	YPR013C	IST1	P53843	298 aa	Predicted RBP	4.56	□□□□□ -1.68
CMR3	YPR013C	GFD1	Q04839	188 aa	Known RBP	4.56	□□□□□ -1.68
CMR3	YPR013C	ROY1	Q04847	553 aa		4.56	□□□□□ -1.68
CMR3	YPR013C	YLR040C	Q07988	224 aa		4.56	□□□□□ -1.68
CMR3	YPR013C	LCB4	Q12246	624 aa		4.56	□□□□□ -1.68
CMR3	YPR013C	AFI1	Q99222	893 aa		4.56	□□□□□ -1.68
CMR3	YPR013C	DAL5	P15365	543 aa		4.55	□□□□□ -1.68
CMR3	YPR013C	PDA1	P16387	420 aa	Known RBP	4.55	□□□□□ -1.68
CMR3	YPR013C	AAD3	P25612	363 aa		4.55	□□□□□ -1.68
CMR3	YPR013C	MGM1	P32266	881 aa		4.55	□□□□□ -1.68
CMR3	YPR013C	SSE2	P32590	693 aa	Known RBP	4.55	□□□□□ -1.68
CMR3	YPR013C	GDA1	P32621	518 aa		4.55	□□□□□ -1.68
CMR3	YPR013C	TFB1	P32776	642 aa		4.55	□□□□□ -1.68
CMR3	YPR013C	WBP1	P33767	430 aa	Known RBP	4.55	□□□□□ -1.68
CMR3	YPR013C	VBA2	P38358	474 aa	Known RBP	4.55	□□□□□ -1.68
CMR3	YPR013C	CBR1	P38626	284 aa	Known RBP	4.55	□□□□□ -1.68
CMR3	YPR013C	UIP3	P39547	235 aa		4.55	□□□□□ -1.68
CMR3	YPR013C	NDC80	P40460	691 aa		4.55	□□□□□ -1.68
CMR3	YPR013C	HXT14	P42833	540 aa		4.55	□□□□□ -1.68
CMR3	YPR013C	DLD2	P46681	530 aa	Known RBP	4.55	□□□□□ -1.68
CMR3	YPR013C	DPB11	P47027	764 aa	Predicted RBP	4.55	□□□□□ -1.68
CMR3	YPR013C	PHO23	P50947	330 aa		4.55	□□□□□ -1.68
CMR3	YPR013C	COQ6	P53318	479 aa		4.55	□□□□□ -1.68
CMR3	YPR013C	SMX3	P54999	86 aa	Predicted RBP	4.55	□□□□□ -1.68
CMR3	YPR013C	YDR179W-A	Q03983	463 aa		4.55	□□□□□ -1.68
CMR3	YPR013C	VTA1	Q06263	330 aa		4.55	□□□□□ -1.68
CMR3	YPR013C	FMP45	Q07651	309 aa		4.55	□□□□□ -1.68
CMR3	YPR013C	NTO1	Q12311	748 aa		4.55	□□□□□ -1.68
CMR3	YPR013C	ZPS1	Q12512	249 aa		4.55	□□□□□ -1.68
CMR3	YPR013C	PCT1	P13259	424 aa		4.54	□□□□□ -1.68
CMR3	YPR013C	RNR3	P21672	869 aa	Known RBP	4.54	□□□□□ -1.68
CMR3	YPR013C	APN1	P22936	367 aa		4.54	□□□□□ -1.68
CMR3	YPR013C	RRP7	P25368	297 aa	Predicted RBP	4.54	□□□□□ -1.68
CMR3	YPR013C	MRPL9	P31334	269 aa		4.54	□□□□□ -1.68
CMR3	YPR013C	SEC66	P33754	206 aa		4.54	□□□□□ -1.68
CMR3	YPR013C	DEF1	P35732	738 aa	Known RBP	4.54	□□□□□ -1.68
CMR3	YPR013C	GLG1	P36143	616 aa		4.54	□□□□□ -1.68
CMR3	YPR013C	MNN2	P38069	597 aa		4.54	□□□□□ -1.68
CMR3	YPR013C	POP2	P39008	433 aa		4.54	□□□□□ -1.68
CMR3	YPR013C	GIP4	P39732	760 aa		4.54	□□□□□ -1.68
CMR3	YPR013C	ASG1	P40467	964 aa		4.54	□□□□□ -1.68
CMR3	YPR013C	FAR3	P46671	204 aa		4.54	□□□□□ -1.68
CMR3	YPR013C	TCB2	P48231	1178 aa		4.54	□□□□□ -1.68
CMR3	YPR013C	IMD4	P50094	524 aa	Known RBP	4.54	□□□□□ -1.68
CMR3	YPR013C	EFM6	P53970	246 aa		4.54	□□□□□ -1.68
CMR3	YPR013C	RPA49	Q01080	415 aa	Predicted RBP	4.54	□□□□□ -1.68
CMR3	YPR013C	AAT1	Q01802	451 aa		4.54	□□□□□ -1.68
CMR3	YPR013C	ARX1	Q03862	593 aa	Known RBP	4.54	□□□□□ -1.68
CMR3	YPR013C	FIN1	Q03898	291 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms