RNA–Protein interactions for RNA: YPL089C

RLM1, Transcript of MADS-box transcription factor, yeast

Gene RLM1, Length 2,031 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RLM1	YPL089C	YGR296C-B	P0CX96	160 aa		1.83	□□□□□ -2.12
RLM1	YPL089C	YPL283W-B	P0CX97	160 aa		1.83	□□□□□ -2.12
RLM1	YPL089C	YPR204C-A	P0CX98	160 aa		1.83	□□□□□ -2.12
RLM1	YPL089C	CKA1	P15790	372 aa		1.83	□□□□□ -2.12
RLM1	YPL089C	KAR3	P17119	729 aa		1.83	□□□□□ -2.12
RLM1	YPL089C	FUR1	P18562	216 aa	Known RBP	1.83	□□□□□ -2.12
RLM1	YPL089C	CDC15	P27636	974 aa		1.83	□□□□□ -2.12
RLM1	YPL089C	PEP3	P27801	918 aa		1.83	□□□□□ -2.12
RLM1	YPL089C	MAL33	P38157	468 aa		1.83	□□□□□ -2.12
RLM1	YPL089C	FTH1	P38310	465 aa		1.83	□□□□□ -2.12
RLM1	YPL089C	VBA2	P38358	474 aa	Known RBP	1.83	□□□□□ -2.12
RLM1	YPL089C	ERC1	P38767	581 aa		1.83	□□□□□ -2.12
RLM1	YPL089C	SAP1	P39955	897 aa	Known RBP	1.83	□□□□□ -2.12
RLM1	YPL089C	CIN1	P40987	1014 aa		1.83	□□□□□ -2.12
RLM1	YPL089C	ARF3	P40994	183 aa	RIP-Chip data	1.83	□□□□□ -2.12	not detected
RLM1	YPL089C	LYS4	P49367	693 aa	Predicted RBP	1.83	□□□□□ -2.12
RLM1	YPL089C	YGL036W	P53185	909 aa	Predicted RBP	1.83	□□□□□ -2.12
RLM1	YPL089C	DCP2	P53550	970 aa	Known RBP	1.83	□□□□□ -2.12
RLM1	YPL089C	VPS75	P53853	264 aa		1.83	□□□□□ -2.12
RLM1	YPL089C	RPT6	Q01939	405 aa	Known RBP	1.83	□□□□□ -2.12
RLM1	YPL089C	YPL071C	Q02864	156 aa		1.83	□□□□□ -2.12
RLM1	YPL089C	CRN1	Q06440	651 aa		1.83	□□□□□ -2.12
RLM1	YPL089C	SWA2	Q06677	668 aa		1.83	□□□□□ -2.12
RLM1	YPL089C	RIX7	Q07844	837 aa	Known RBP	1.83	□□□□□ -2.12
RLM1	YPL089C	RRG1	Q12167	365 aa	Predicted RBP	1.83	□□□□□ -2.12
RLM1	YPL089C	NOP58	Q12499	511 aa	Known RBP	1.83	□□□□□ -2.12
RLM1	YPL089C	YBR085C-A	O43137	85 aa		1.83	□□□□□ -2.12
RLM1	YPL089C	YPT1	P01123	206 aa	Known RBP	1.83	□□□□□ -2.12
RLM1	YPL089C	SES1	P07284	462 aa	Known RBP	1.83	□□□□□ -2.12
RLM1	YPL089C	YAP1	P19880	650 aa	Known RBP	1.83	□□□□□ -2.12
RLM1	YPL089C	SRP54	P20424	541 aa	Known RBP	1.83	□□□□□ -2.12
RLM1	YPL089C	POL4	P25615	582 aa		1.83	□□□□□ -2.12
RLM1	YPL089C	LAC1	P28496	418 aa		1.83	□□□□□ -2.12
RLM1	YPL089C	NPL6	P32832	435 aa		1.83	□□□□□ -2.12
RLM1	YPL089C	SPC97	P38863	823 aa		1.83	□□□□□ -2.12
RLM1	YPL089C	RGI2	P40188	164 aa		1.83	□□□□□ -2.12
RLM1	YPL089C	SEC24	P40482	926 aa	Known RBP	1.83	□□□□□ -2.12
RLM1	YPL089C	SPO22	P40511	975 aa		1.83	□□□□□ -2.12
RLM1	YPL089C	PCI8	P40512	444 aa		1.83	□□□□□ -2.12
RLM1	YPL089C	YIL024C	P40543	189 aa		1.83	□□□□□ -2.12
RLM1	YPL089C	CFD1	P40558	293 aa		1.83	□□□□□ -2.12
RLM1	YPL089C	SWP82	P43554	623 aa		1.83	□□□□□ -2.12
RLM1	YPL089C	COP1	P53622	1201 aa	Known RBP	1.83	□□□□□ -2.12
RLM1	YPL089C	SKG3	Q06315	1026 aa		1.83	□□□□□ -2.12
RLM1	YPL089C	GPN2	Q08726	347 aa	Predicted RBP	1.83	□□□□□ -2.12
RLM1	YPL089C	TCO89	Q08921	799 aa		1.83	□□□□□ -2.12
RLM1	YPL089C	YPL191C	Q08930	360 aa		1.83	□□□□□ -2.12
RLM1	YPL089C	RCN2	Q12044	265 aa		1.83	□□□□□ -2.12
RLM1	YPL089C	RTC1	Q08281	1341 aa		1.82	□□□□□ -2.12
RLM1	YPL089C	YPR089W	O13585	888 aa		1.82	□□□□□ -2.12
RLM1	YPL089C	PCT1	P13259	424 aa		1.82	□□□□□ -2.12
RLM1	YPL089C	CBS1	P14066	229 aa		1.82	□□□□□ -2.12
RLM1	YPL089C	ASK1	P35734	292 aa		1.82	□□□□□ -2.12
RLM1	YPL089C	UBP13	P38187	747 aa		1.82	□□□□□ -2.12
RLM1	YPL089C	RKM3	P38222	552 aa		1.82	□□□□□ -2.12
RLM1	YPL089C	SLX1	P38324	304 aa		1.82	□□□□□ -2.12
RLM1	YPL089C	LCL3	P53153	274 aa		1.82	□□□□□ -2.12
RLM1	YPL089C	SCW4	P53334	386 aa	Known RBP	1.82	□□□□□ -2.12
RLM1	YPL089C	ADE16	P54113	591 aa	Known RBP	1.82	□□□□□ -2.12
RLM1	YPL089C	YAT1	P80235	687 aa		1.82	□□□□□ -2.12
RLM1	YPL089C	INA17	Q02888	182 aa		1.82	□□□□□ -2.12
RLM1	YPL089C	SPE4	Q12455	300 aa		1.82	□□□□□ -2.12
RLM1	YPL089C	RED1	P14291	827 aa		1.81	□□□□□ -2.12
RLM1	YPL089C	ROX1	P25042	368 aa		1.81	□□□□□ -2.12
RLM1	YPL089C	PTC6	P25646	442 aa		1.81	□□□□□ -2.12
RLM1	YPL089C	COQ3	P27680	312 aa		1.81	□□□□□ -2.12
RLM1	YPL089C	ERG3	P32353	365 aa		1.81	□□□□□ -2.12
RLM1	YPL089C	NTR2	P36118	322 aa	Predicted RBP	1.81	□□□□□ -2.12
RLM1	YPL089C	AAP1	P37898	856 aa	Known RBP	1.81	□□□□□ -2.12
RLM1	YPL089C	YNG2	P38806	282 aa	Known RBP	1.81	□□□□□ -2.12
RLM1	YPL089C	SEC31	P38968	1273 aa	Known RBP	1.81	□□□□□ -2.12
RLM1	YPL089C	BUR6	P40096	142 aa		1.81	□□□□□ -2.12
RLM1	YPL089C	GPD2	P41911	440 aa	Known RBP	1.81	□□□□□ -2.12
RLM1	YPL089C	IRC8	P47046	822 aa		1.81	□□□□□ -2.12
RLM1	YPL089C	RSM28	Q03430	361 aa		1.81	□□□□□ -2.12
RLM1	YPL089C	SNU56	Q03782	492 aa	Known RBP	1.81	□□□□□ -2.12
RLM1	YPL089C	YMR155W	Q03795	547 aa		1.81	□□□□□ -2.12
RLM1	YPL089C	YEH1	Q07804	573 aa		1.81	□□□□□ -2.12
RLM1	YPL089C	YPL272C	Q08984	517 aa		1.81	□□□□□ -2.12
RLM1	YPL089C	PGA3	Q12746	312 aa	Known RBP	1.81	□□□□□ -2.12
RLM1	YPL089C	HOM3	P10869	527 aa		1.81	□□□□□ -2.12
RLM1	YPL089C	LCB1	P25045	558 aa	Known RBP	1.81	□□□□□ -2.12
RLM1	YPL089C	OCA4	P25366	362 aa		1.81	□□□□□ -2.12
RLM1	YPL089C	MGM1	P32266	881 aa		1.81	□□□□□ -2.12
RLM1	YPL089C	PDB1	P32473	366 aa	Known RBP	1.81	□□□□□ -2.12
RLM1	YPL089C	BYE1	P36106	594 aa		1.81	□□□□□ -2.12
RLM1	YPL089C	SRO77	P38163	1010 aa		1.81	□□□□□ -2.12
RLM1	YPL089C	UTP9	P38882	575 aa	Known RBP	1.81	□□□□□ -2.12
RLM1	YPL089C	ERV46	P39727	415 aa		1.81	□□□□□ -2.12
RLM1	YPL089C	YEL057C	P39983	233 aa		1.81	□□□□□ -2.12
RLM1	YPL089C	PHM8	P40025	321 aa		1.81	□□□□□ -2.12
RLM1	YPL089C	MRX1	P40050	688 aa		1.81	□□□□□ -2.12
RLM1	YPL089C	MDG1	P53885	366 aa		1.81	□□□□□ -2.12
RLM1	YPL089C	AAT1	Q01802	451 aa		1.81	□□□□□ -2.12
RLM1	YPL089C	MRPL1	Q04599	285 aa		1.81	□□□□□ -2.12
RLM1	YPL089C	PSR1	Q07800	427 aa		1.81	□□□□□ -2.12
RLM1	YPL089C	SFI1	Q12369	946 aa		1.81	□□□□□ -2.12
RLM1	YPL089C	GAL4	P04386	881 aa		1.8	□□□□□ -2.12
RLM1	YPL089C	ILV2	P07342	687 aa	Known RBP	1.8	□□□□□ -2.12
RLM1	YPL089C	ILS1	P09436	1072 aa	Known RBP	1.8	□□□□□ -2.12

Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms