RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene SNF8, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF8YPL002C QCR6P00127 147 aa4.37□□□□□ -1.71
SNF8YPL002C TPK2P06245 380 aa4.37□□□□□ -1.71
SNF8YPL002C MATALPHA2P0CY08 210 aa4.37□□□□□ -1.71
SNF8YPL002C HMLALPHA2P0CY09 210 aa4.37□□□□□ -1.71
SNF8YPL002C RPL4AP10664 362 aaKnown RBP4.37□□□□□ -1.71
SNF8YPL002C CBP3P21560 335 aa4.37□□□□□ -1.71
SNF8YPL002C PPH22P23595 377 aa4.37□□□□□ -1.71
SNF8YPL002C PTP1P25044 335 aa4.37□□□□□ -1.71
SNF8YPL002C YSC83P32792 385 aa4.37□□□□□ -1.71
SNF8YPL002C COS111P38308 924 aa4.37□□□□□ -1.71
SNF8YPL002C XBP1P40489 647 aa4.37□□□□□ -1.71
SNF8YPL002C TAX4P47030 604 aa4.37□□□□□ -1.71
SNF8YPL002C RPL4BP49626 362 aaKnown RBP4.37□□□□□ -1.71
SNF8YPL002C ORC5P50874 479 aa4.37□□□□□ -1.71
SNF8YPL002C WAR1Q03631 944 aa4.37□□□□□ -1.71
SNF8YPL002C YDR179W-AQ03983 463 aa4.37□□□□□ -1.71
SNF8YPL002C UTP14Q04500 899 aaKnown RBP4.37□□□□□ -1.71
SNF8YPL002C COG8Q04632 607 aa4.37□□□□□ -1.71
SNF8YPL002C EIS1Q05050 843 aaKnown RBP4.37□□□□□ -1.71
SNF8YPL002C ULA1Q12059 462 aa4.37□□□□□ -1.71
SNF8YPL002C BRR2P32639 2163 aaKnown RBP4.36□□□□□ -1.71
SNF8YPL002C ERG20P08524 352 aaKnown RBP4.36□□□□□ -1.71
SNF8YPL002C CKA2P19454 339 aa4.36□□□□□ -1.71
SNF8YPL002C SFL1P20134 766 aa4.36□□□□□ -1.71
SNF8YPL002C RAD16P31244 790 aa4.36□□□□□ -1.71
SNF8YPL002C THI4P32318 326 aa4.36□□□□□ -1.71
SNF8YPL002C TFB1P32776 642 aa4.36□□□□□ -1.71
SNF8YPL002C PRS1P32895 427 aaKnown RBP4.36□□□□□ -1.71
SNF8YPL002C PDR3P33200 976 aa4.36□□□□□ -1.71
SNF8YPL002C YHR054CP38780 354 aa4.36□□□□□ -1.71
SNF8YPL002C LTP1P40347 161 aa4.36□□□□□ -1.71
SNF8YPL002C BIT61P47041 543 aa4.36□□□□□ -1.71
SNF8YPL002C TOF1P53840 1238 aa4.36□□□□□ -1.71
SNF8YPL002C ARK1P53974 638 aa4.36□□□□□ -1.71
SNF8YPL002C TOF2Q02208 771 aa4.36□□□□□ -1.71
SNF8YPL002C HER2Q03557 464 aa4.36□□□□□ -1.71
SNF8YPL002C GIR2Q03768 265 aaPredicted RBP4.36□□□□□ -1.71
SNF8YPL002C PRM6Q04705 352 aa4.36□□□□□ -1.71
SNF8YPL002C CDD1Q06549 142 aa4.36□□□□□ -1.71
SNF8YPL002C YDL057WQ07379 328 aa4.36□□□□□ -1.71
SNF8YPL002C GPM2Q12008 311 aa4.36□□□□□ -1.71
SNF8YPL002C ASP3-2P0CX77 362 aa4.35□□□□□ -1.71
SNF8YPL002C ASP3-3P0CX78 362 aa4.35□□□□□ -1.71
SNF8YPL002C ASP3-4P0CX79 362 aa4.35□□□□□ -1.71
SNF8YPL002C ASP3-1P0CZ17 362 aa4.35□□□□□ -1.71
SNF8YPL002C FRS1P15624 595 aaKnown RBP4.35□□□□□ -1.71
SNF8YPL002C VPS1P21576 704 aaKnown RBP4.35□□□□□ -1.71
SNF8YPL002C TKL2P33315 681 aa4.35□□□□□ -1.71
SNF8YPL002C YEL1P34225 687 aa4.35□□□□□ -1.71
SNF8YPL002C KDX1P36005 433 aa4.35□□□□□ -1.71
SNF8YPL002C ELF1P36053 145 aa4.35□□□□□ -1.71
SNF8YPL002C OSW5P40219 148 aa4.35□□□□□ -1.71
SNF8YPL002C YIL161WP40449 235 aaKnown RBP4.35□□□□□ -1.71
SNF8YPL002C CUE3P53137 624 aaKnown RBP4.35□□□□□ -1.71
SNF8YPL002C YAT1P80235 687 aa4.35□□□□□ -1.71
SNF8YPL002C SMA1Q02651 245 aa4.35□□□□□ -1.71
SNF8YPL002C BSP1Q06604 576 aa4.35□□□□□ -1.71
SNF8YPL002C IZH3Q07959 543 aa4.35□□□□□ -1.71
SNF8YPL002C VHS3Q08438 674 aa4.35□□□□□ -1.71
SNF8YPL002C HSC82P15108 705 aaKnown RBP4.34□□□□□ -1.71
SNF8YPL002C FPR1P20081 114 aaKnown RBP4.34□□□□□ -1.71
SNF8YPL002C APN1P22936 367 aa4.34□□□□□ -1.71
SNF8YPL002C NTH1P32356 751 aa4.34□□□□□ -1.71
SNF8YPL002C MFT1P33441 392 aaKnown RBP4.34□□□□□ -1.71
SNF8YPL002C TOM20P35180 183 aa4.34□□□□□ -1.71
SNF8YPL002C YBR056WP38081 501 aa4.34□□□□□ -1.71
SNF8YPL002C SIF2P38262 535 aa4.34□□□□□ -1.71
SNF8YPL002C ATG12P38316 186 aa4.34□□□□□ -1.71
SNF8YPL002C LEU5P38702 357 aa4.34□□□□□ -1.71
SNF8YPL002C BEM4P39011 633 aa4.34□□□□□ -1.71
SNF8YPL002C HSH155P49955 971 aaKnown RBP4.34□□□□□ -1.71
SNF8YPL002C GPD1Q00055 391 aaKnown RBP4.34□□□□□ -1.71
SNF8YPL002C SNU56Q03782 492 aaKnown RBP4.34□□□□□ -1.71
SNF8YPL002C UFO1Q04511 668 aa4.34□□□□□ -1.71
SNF8YPL002C CUR1Q06469 252 aa4.34□□□□□ -1.71
SNF8YPL002C TSR1Q07381 788 aaKnown RBP4.34□□□□□ -1.71
SNF8YPL002C NTG2Q08214 380 aa4.34□□□□□ -1.71
SNF8YPL002C POL2P21951 2222 aaKnown RBP4.34□□□□□ -1.72
SNF8YPL002C UTP20P35194 2493 aaKnown RBP4.33□□□□□ -1.72
SNF8YPL002C TPK1P06244 397 aa4.33□□□□□ -1.72
SNF8YPL002C YEL076C-AP0CX16 216 aa4.33□□□□□ -1.72
SNF8YPL002C YLR464WP0CX17 216 aa4.33□□□□□ -1.72
SNF8YPL002C ALG1P16661 449 aa4.33□□□□□ -1.72
SNF8YPL002C PET127P32606 800 aa4.33□□□□□ -1.72
SNF8YPL002C YEL076CP39971 216 aa4.33□□□□□ -1.72
SNF8YPL002C RMD8P43620 662 aa4.33□□□□□ -1.72
SNF8YPL002C CEG1Q01159 459 aaPredicted RBP4.33□□□□□ -1.72
SNF8YPL002C MTD1Q02046 320 aaKnown RBP4.33□□□□□ -1.72
SNF8YPL002C ARG7Q04728 441 aa4.33□□□□□ -1.72
SNF8YPL002C GET3Q12154 354 aaKnown RBP4.33□□□□□ -1.72
SNF8YPL002C RGT2Q12300 763 aa4.33□□□□□ -1.72
SNF8YPL002C NAT1P12945 854 aaKnown RBP4.32□□□□□ -1.72
SNF8YPL002C SEC15P22224 910 aa4.32□□□□□ -1.72
SNF8YPL002C SFP1P32432 683 aa4.32□□□□□ -1.72
SNF8YPL002C FRE1P32791 686 aa4.32□□□□□ -1.72
SNF8YPL002C HOT13P36078 116 aa4.32□□□□□ -1.72
SNF8YPL002C TIF5P38431 405 aaKnown RBP4.32□□□□□ -1.72
SNF8YPL002C AVT2P39981 480 aa4.32□□□□□ -1.72
SNF8YPL002C YJR061WP40355 935 aa4.32□□□□□ -1.72
SNF8YPL002C CCT5P40413 562 aaKnown RBP4.32□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 35 ms