RNA–Protein interactions for RNA: YOR290C

SNF2, Transcript of Catalytic subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF2, Length 5,112 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF2	YOR290C	TSC13	Q99190	310 aa		4.08	□□□□□ -1.76
SNF2	YOR290C	ILV1	P00927	576 aa	Known RBP	4.08	□□□□□ -1.76
SNF2	YOR290C	PRD1	P25375	712 aa		4.08	□□□□□ -1.76
SNF2	YOR290C	KAE1	P36132	386 aa		4.08	□□□□□ -1.76
SNF2	YOR290C	CBP4	P37267	147 aa		4.08	□□□□□ -1.76
SNF2	YOR290C	MGS1	P40151	587 aa		4.08	□□□□□ -1.76
SNF2	YOR290C	ULP2	P40537	1034 aa	Predicted RBP	4.08	□□□□□ -1.76
SNF2	YOR290C	DAK2	P43550	591 aa		4.08	□□□□□ -1.76
SNF2	YOR290C	MIC19	P43594	170 aa		4.08	□□□□□ -1.76
SNF2	YOR290C	XPT1	P47165	209 aa		4.08	□□□□□ -1.76
SNF2	YOR290C	ADD37	Q03233	198 aa		4.08	□□□□□ -1.76
SNF2	YOR290C	PRP42	Q03776	544 aa	Known RBP	4.08	□□□□□ -1.76
SNF2	YOR290C	GTO3	Q04806	366 aa		4.08	□□□□□ -1.76
SNF2	YOR290C	PNP1	Q05788	311 aa		4.08	□□□□□ -1.76
SNF2	YOR290C	PEX30	Q06169	523 aa		4.08	□□□□□ -1.76
SNF2	YOR290C	YOL131W	Q08270	108 aa		4.08	□□□□□ -1.76
SNF2	YOR290C	LEU9	Q12166	604 aa	Known RBP	4.08	□□□□□ -1.76
SNF2	YOR290C	SEN2	P16658	377 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	GPI10	P30777	616 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	ACP1	P32463	125 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	PTM1	P32857	523 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	SPT23	P35210	1082 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	YKL133C	P36066	463 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	SDP1	P40479	209 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	FMP32	P43557	207 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	VPS70	P47161	811 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	GIS1	Q03833	894 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	YDL124W	Q07551	312 aa	Known RBP	4.07	□□□□□ -1.76
SNF2	YOR290C	RRI1	Q12468	440 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	PGK1	P00560	416 aa	Known RBP	4.07	□□□□□ -1.76
SNF2	YOR290C	MSF1	P08425	469 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	MET3	P08536	511 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	MER1	P16523	270 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	RPL16A	P26784	199 aa	Known RBP	4.07	□□□□□ -1.76
SNF2	YOR290C	DPH2	P32461	534 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	MRPL11	P36521	249 aa	Predicted RBP	4.07	□□□□□ -1.76
SNF2	YOR290C	YAP3	P38749	330 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	YAL037W	P39728	267 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	MET28	P40573	187 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	MSS2	P40990	351 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	TAF6	P53040	516 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	VOA1	P53262	265 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	MRP51	Q02950	344 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	TLG1	Q03322	224 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	YMR160W	Q03823	816 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	BSP1	Q06604	576 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	PSR1	Q07800	427 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	BUD20	Q08004	166 aa	Predicted RBP	4.07	□□□□□ -1.76
SNF2	YOR290C	BCK1	Q01389	1478 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	ENO2	P00925	437 aa	Known RBP	4.07	□□□□□ -1.76
SNF2	YOR290C	LCB1	P25045	558 aa	Known RBP	4.07	□□□□□ -1.76
SNF2	YOR290C	ARE1	P25628	610 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	RPN12	P32496	274 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	STV1	P37296	890 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	EFM1	P38732	585 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	PAC1	P39946	494 aa	Known RBP	4.07	□□□□□ -1.76
SNF2	YOR290C	REF2	P42073	533 aa	Predicted RBP	4.07	□□□□□ -1.76
SNF2	YOR290C	MON1	P53129	644 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	DRN1	P53255	507 aa	Known RBP	4.07	□□□□□ -1.76
SNF2	YOR290C	RHO4	Q00246	291 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	GRX3	Q03835	250 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	DOT1	Q04089	582 aa	Known RBP	4.07	□□□□□ -1.76
SNF2	YOR290C	YLR173W	Q06247	608 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	YPL199C	Q08954	240 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	YPR027C	Q12079	277 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	REC8	Q12188	680 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	APC2	Q12440	853 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	RPP0	P05317	312 aa	Known RBP	4.07	□□□□□ -1.76
SNF2	YOR290C	DBP1	P24784	617 aa	Known RBP	4.07	□□□□□ -1.76
SNF2	YOR290C	NFS1	P25374	497 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	MDL1	P33310	695 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	MRPL10	P36520	322 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	POP4	P38336	279 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	OSH3	P38713	996 aa	Known RBP	4.07	□□□□□ -1.76
SNF2	YOR290C	END3	P39013	349 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	SLD3	P53135	668 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	YGL108C	P53139	140 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	SLX9	P53251	210 aa	Predicted RBP	4.07	□□□□□ -1.76
SNF2	YOR290C	RTS3	P53289	263 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	SSU72	P53538	206 aa	Predicted RBP	4.07	□□□□□ -1.76
SNF2	YOR290C	YNL092W	P53934	400 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	TDA1	Q03533	586 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	HRT3	Q12347	344 aa		4.07	□□□□□ -1.76
SNF2	YOR290C	SFL1	P20134	766 aa		4.06	□□□□□ -1.76
SNF2	YOR290C	PRE9	P23638	258 aa	Known RBP	4.06	□□□□□ -1.76
SNF2	YOR290C	MNE1	P24720	663 aa		4.06	□□□□□ -1.76
SNF2	YOR290C	SUA7	P29055	345 aa	Predicted RBP	4.06	□□□□□ -1.76
SNF2	YOR290C	SWC5	P38326	303 aa		4.06	□□□□□ -1.76
SNF2	YOR290C	OCA5	P38738	679 aa		4.06	□□□□□ -1.76
SNF2	YOR290C	RRF1	P38771	230 aa		4.06	□□□□□ -1.76
SNF2	YOR290C	GPP1	P41277	250 aa	Known RBP	4.06	□□□□□ -1.76
SNF2	YOR290C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
SNF2	YOR290C	ROY1	Q04847	553 aa		4.06	□□□□□ -1.76
SNF2	YOR290C	IRC25	Q07951	179 aa		4.06	□□□□□ -1.76
SNF2	YOR290C	TUM1	Q08686	304 aa	Known RBP	4.06	□□□□□ -1.76
SNF2	YOR290C	YDL176W	Q12027	708 aa		4.06	□□□□□ -1.76
SNF2	YOR290C	HMI1	Q12039	706 aa		4.06	□□□□□ -1.76
SNF2	YOR290C	ATG31	Q12421	196 aa		4.06	□□□□□ -1.76
SNF2	YOR290C	INH1	P01097	85 aa		4.06	□□□□□ -1.76
SNF2	YOR290C	FLP1	P03870	423 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 31 ms