RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A NPA3P47122 385 aa3.87□□□□□ -1.79
YSF3YNL138W-A SGM1P47166 707 aa3.87□□□□□ -1.79
YSF3YNL138W-A IMD3P50095 523 aaKnown RBP3.87□□□□□ -1.79
YSF3YNL138W-A SCS3P53012 380 aa3.87□□□□□ -1.79
YSF3YNL138W-A AAT1Q01802 451 aa3.87□□□□□ -1.79
YSF3YNL138W-A VPS72Q03388 795 aa3.87□□□□□ -1.79
YSF3YNL138W-A CIA1Q05583 330 aa3.87□□□□□ -1.79
YSF3YNL138W-A RAD34Q06665 692 aa3.87□□□□□ -1.79
YSF3YNL138W-A YBR255C-AQ3E776 120 aa3.87□□□□□ -1.79
YSF3YNL138W-A COX1P00401 534 aa3.86□□□□□ -1.79
YSF3YNL138W-A BI2P03873 423 aa3.86□□□□□ -1.79
YSF3YNL138W-A SES1P07284 462 aaKnown RBP3.86□□□□□ -1.79
YSF3YNL138W-A PET122P10355 254 aa3.86□□□□□ -1.79
YSF3YNL138W-A KES1P35844 434 aaKnown RBP3.86□□□□□ -1.79
YSF3YNL138W-A VBA2P38358 474 aaKnown RBP3.86□□□□□ -1.79
YSF3YNL138W-A RAD26P40352 1085 aa3.86□□□□□ -1.79
YSF3YNL138W-A ERR3P42222 437 aa3.86□□□□□ -1.79
YSF3YNL138W-A CIR1P42940 261 aa3.86□□□□□ -1.79
YSF3YNL138W-A NMD5P46970 1048 aa3.86□□□□□ -1.79
YSF3YNL138W-A BPL1P48445 690 aaPredicted RBP3.86□□□□□ -1.79
YSF3YNL138W-A IMA1P53051 589 aa3.86□□□□□ -1.79
YSF3YNL138W-A YGR079WP53249 370 aa3.86□□□□□ -1.79
YSF3YNL138W-A YNL050CP53952 270 aa3.86□□□□□ -1.79
YSF3YNL138W-A YPL071CQ02864 156 aa3.86□□□□□ -1.79
YSF3YNL138W-A STP3Q05937 343 aa3.86□□□□□ -1.79
YSF3YNL138W-A TPO3Q06451 622 aa3.86□□□□□ -1.79
YSF3YNL138W-A YOR389WQ08912 624 aa3.86□□□□□ -1.79
YSF3YNL138W-A PRS5Q12265 496 aaKnown RBP3.86□□□□□ -1.79
YSF3YNL138W-A BIK1P11709 440 aa3.85□□□□□ -1.79
YSF3YNL138W-A MAK32P23060 363 aa3.85□□□□□ -1.79
YSF3YNL138W-A URE2P23202 354 aaKnown RBP3.85□□□□□ -1.79
YSF3YNL138W-A YUR1P26725 428 aa3.85□□□□□ -1.79
YSF3YNL138W-A DBF20P32328 564 aa3.85□□□□□ -1.79
YSF3YNL138W-A RPF2P36160 344 aaKnown RBP3.85□□□□□ -1.79
YSF3YNL138W-A BNA3P47039 444 aaKnown RBP3.85□□□□□ -1.79
YSF3YNL138W-A YML037CQ03703 340 aa3.85□□□□□ -1.79
YSF3YNL138W-A ECM16Q04217 1267 aaKnown RBP3.85□□□□□ -1.79
YSF3YNL138W-A RTP1Q12751 981 aa3.85□□□□□ -1.79
YSF3YNL138W-A GCD7P32502 381 aaPredicted RBP3.84□□□□□ -1.79
YSF3YNL138W-A FTH1P38310 465 aa3.84□□□□□ -1.79
YSF3YNL138W-A FSH1P38777 243 aaKnown RBP3.84□□□□□ -1.79
YSF3YNL138W-A TIF4631P39935 952 aaKnown RBP3.84□□□□□ -1.79
YSF3YNL138W-A ZAP1P47043 880 aa3.84□□□□□ -1.79
YSF3YNL138W-A MPP10P47083 593 aaKnown RBP3.84□□□□□ -1.79
YSF3YNL138W-A RTS3P53289 263 aa3.84□□□□□ -1.79
YSF3YNL138W-A ARC35P53731 342 aaKnown RBP3.84□□□□□ -1.79
YSF3YNL138W-A YAT1P80235 687 aa3.84□□□□□ -1.79
YSF3YNL138W-A RSC9Q03124 581 aa3.84□□□□□ -1.79
YSF3YNL138W-A TRS130Q03660 1102 aa3.84□□□□□ -1.79
YSF3YNL138W-A YPL191CQ08930 360 aa3.84□□□□□ -1.79
YSF3YNL138W-A RVB2Q12464 471 aaKnown RBP3.84□□□□□ -1.79
YSF3YNL138W-A ILV2P07342 687 aaKnown RBP3.83□□□□□ -1.8
YSF3YNL138W-A POX1P13711 748 aa3.83□□□□□ -1.8
YSF3YNL138W-A PTP1P25044 335 aa3.83□□□□□ -1.8
YSF3YNL138W-A SWC3P31376 625 aa3.83□□□□□ -1.8
YSF3YNL138W-A SYN8P31377 255 aa3.83□□□□□ -1.8
YSF3YNL138W-A UTR4P32626 227 aa3.83□□□□□ -1.8
YSF3YNL138W-A PTK1P36002 662 aaPredicted RBP3.83□□□□□ -1.8
YSF3YNL138W-A NUP133P36161 1157 aa3.83□□□□□ -1.8
YSF3YNL138W-A TOM71P38825 639 aaKnown RBP3.83□□□□□ -1.8
YSF3YNL138W-A ERV46P39727 415 aa3.83□□□□□ -1.8
YSF3YNL138W-A FUN12P39730 1002 aaKnown RBP3.83□□□□□ -1.8
YSF3YNL138W-A BUD16P39988 312 aa3.83□□□□□ -1.8
YSF3YNL138W-A UBP7P40453 1071 aa3.83□□□□□ -1.8
YSF3YNL138W-A ULP2P40537 1034 aaPredicted RBP3.83□□□□□ -1.8
YSF3YNL138W-A CIN1P40987 1014 aa3.83□□□□□ -1.8
YSF3YNL138W-A YGL039WP53183 348 aaKnown RBP3.83□□□□□ -1.8
YSF3YNL138W-A SNU56Q03782 492 aaKnown RBP3.83□□□□□ -1.8
YSF3YNL138W-A LYS21Q12122 440 aaKnown RBP3.83□□□□□ -1.8
YSF3YNL138W-A RPP0P05317 312 aaKnown RBP3.82□□□□□ -1.8
YSF3YNL138W-A NUC1P08466 329 aa3.82□□□□□ -1.8
YSF3YNL138W-A YMR085WP0CF18 432 aa3.82□□□□□ -1.8
YSF3YNL138W-A YCL049CP25577 312 aa3.82□□□□□ -1.8
YSF3YNL138W-A LAC1P28496 418 aa3.82□□□□□ -1.8
YSF3YNL138W-A GSH1P32477 678 aa3.82□□□□□ -1.8
YSF3YNL138W-A LTP1P40347 161 aa3.82□□□□□ -1.8
YSF3YNL138W-A FAF1P40546 346 aaPredicted RBP3.82□□□□□ -1.8
YSF3YNL138W-A SNO3P43544 222 aa3.82□□□□□ -1.8
YSF3YNL138W-A RRP46P53256 223 aaPredicted RBP3.82□□□□□ -1.8
YSF3YNL138W-A IDP3P53982 420 aaKnown RBP3.82□□□□□ -1.8
YSF3YNL138W-A MTG1Q03151 367 aaPredicted RBP3.82□□□□□ -1.8
YSF3YNL138W-A YDR109CQ04585 715 aa3.82□□□□□ -1.8
YSF3YNL138W-A GTB1Q04924 702 aa3.82□□□□□ -1.8
YSF3YNL138W-A BLS1Q06071 122 aa3.82□□□□□ -1.8
YSF3YNL138W-A CSF1Q12150 2958 aa3.82□□□□□ -1.8
YSF3YNL138W-A BEM2P39960 2167 aaKnown RBP3.82□□□□□ -1.8
YSF3YNL138W-A CET1O13297 549 aaPredicted RBP3.81□□□□□ -1.8
YSF3YNL138W-A PTC6P25646 442 aa3.81□□□□□ -1.8
YSF3YNL138W-A RFA2P26754 273 aaKnown RBP3.81□□□□□ -1.8
YSF3YNL138W-A HES1P35843 434 aa3.81□□□□□ -1.8
YSF3YNL138W-A CST26P38226 397 aa3.81□□□□□ -1.8
YSF3YNL138W-A ARP1P38696 384 aa3.81□□□□□ -1.8
YSF3YNL138W-A TVP23P38962 199 aa3.81□□□□□ -1.8
YSF3YNL138W-A IES5P40060 125 aa3.81□□□□□ -1.8
YSF3YNL138W-A PSA1P41940 361 aaKnown RBP3.81□□□□□ -1.8
YSF3YNL138W-A IRC7P43623 340 aa3.81□□□□□ -1.8
YSF3YNL138W-A UBX6P47049 396 aa3.81□□□□□ -1.8
YSF3YNL138W-A YNL058CP53947 316 aa3.81□□□□□ -1.8
YSF3YNL138W-A ERG13P54839 491 aaKnown RBP3.81□□□□□ -1.8
YSF3YNL138W-A MFB1Q04922 465 aa3.81□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms