RNA–Protein interactions for RNA: YMR296C

LCB1, Transcript of Component of serine palmitoyltransferase, yeastyeast

Gene LCB1, Length 1,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB1YMR296C AIM23P47015 356 aa11.4□□□□□ -0.58
LCB1YMR296C TRF5P48561 642 aaKnown RBP11.4□□□□□ -0.58
LCB1YMR296C TDA7P53882 636 aaPredicted RBP11.4□□□□□ -0.58
LCB1YMR296C NIS1P53939 407 aa11.4□□□□□ -0.58
LCB1YMR296C PIR1Q03178 341 aa11.4□□□□□ -0.58
LCB1YMR296C RLI1Q03195 608 aaKnown RBP11.4□□□□□ -0.58
LCB1YMR296C ASK1P35734 292 aa11.4□□□□□ -0.59
LCB1YMR296C YHR182WP38870 785 aa11.4□□□□□ -0.59
LCB1YMR296C GDH3P39708 457 aa11.4□□□□□ -0.59
LCB1YMR296C MAM33P40513 266 aa11.4□□□□□ -0.59
LCB1YMR296C AIF1P52923 378 aa11.4□□□□□ -0.59
LCB1YMR296C RRP36Q12481 300 aaPredicted RBP11.4□□□□□ -0.59
LCB1YMR296C MSB2P32334 1306 aa11.39□□□□□ -0.59
LCB1YMR296C GLN4P13188 809 aaKnown RBP11.39□□□□□ -0.59
LCB1YMR296C SEC63P14906 663 aa11.39□□□□□ -0.59
LCB1YMR296C HSC82P15108 705 aaKnown RBP11.39□□□□□ -0.59
LCB1YMR296C GUT1P32190 709 aa11.39□□□□□ -0.59
LCB1YMR296C EAP1P36041 632 aaKnown RBP11.39□□□□□ -0.59
LCB1YMR296C NUP84P52891 726 aa11.39□□□□□ -0.59
LCB1YMR296C CAF120P53836 1060 aa11.39□□□□□ -0.59
LCB1YMR296C SIW14P53965 281 aa11.39□□□□□ -0.59
LCB1YMR296C MET14Q02196 202 aa11.39□□□□□ -0.59
LCB1YMR296C YML053CQ04978 212 aa11.39□□□□□ -0.59
LCB1YMR296C BCP1Q06338 283 aa11.39□□□□□ -0.59
LCB1YMR296C PEX11Q12462 236 aa11.39□□□□□ -0.59
LCB1YMR296C MRPL8P22353 238 aa11.38□□□□□ -0.59
LCB1YMR296C SAN1P22470 610 aa11.38□□□□□ -0.59
LCB1YMR296C SEO1P39709 593 aa11.38□□□□□ -0.59
LCB1YMR296C ELO3P40319 345 aa11.38□□□□□ -0.59
LCB1YMR296C AIM14P53109 570 aa11.38□□□□□ -0.59
LCB1YMR296C COG2P53271 262 aa11.38□□□□□ -0.59
LCB1YMR296C RPL34AP87262 121 aaPredicted RBP11.38□□□□□ -0.59
LCB1YMR296C TRS31Q03337 283 aa11.38□□□□□ -0.59
LCB1YMR296C SYT1Q06836 1226 aa11.38□□□□□ -0.59
LCB1YMR296C PDC5P16467 563 aaKnown RBP11.37□□□□□ -0.59
LCB1YMR296C MIH1P23748 554 aa11.37□□□□□ -0.59
LCB1YMR296C CLB4P24871 460 aa11.37□□□□□ -0.59
LCB1YMR296C TYE7P33122 291 aaPredicted RBP11.37□□□□□ -0.59
LCB1YMR296C TFC3P34111 1160 aa11.37□□□□□ -0.59
LCB1YMR296C BZZ1P38822 633 aa11.37□□□□□ -0.59
LCB1YMR296C RLP7P40693 322 aaKnown RBP11.37□□□□□ -0.59
LCB1YMR296C RSM7P47150 247 aa11.37□□□□□ -0.59
LCB1YMR296C PEX13P80667 386 aa11.37□□□□□ -0.59
LCB1YMR296C GLO2Q05584 274 aa11.37□□□□□ -0.59
LCB1YMR296C MEU1Q07938 337 aaKnown RBP RIP-Chip data11.37□□□□□ -0.59not detected
LCB1YMR296C COX6P00427 148 aa11.36□□□□□ -0.59
LCB1YMR296C SST2P11972 698 aaKnown RBP11.36□□□□□ -0.59
LCB1YMR296C YAK1P14680 807 aa11.36□□□□□ -0.59
LCB1YMR296C PAT1P25644 796 aaKnown RBP11.36□□□□□ -0.59
LCB1YMR296C BEM1P29366 551 aa11.36□□□□□ -0.59
LCB1YMR296C AST1P35183 429 aa11.36□□□□□ -0.59
LCB1YMR296C PRM2P40534 656 aa11.36□□□□□ -0.59
LCB1YMR296C STE2D6VTK4 431 aa11.36□□□□□ -0.59
LCB1YMR296C CAR1P00812 333 aaKnown RBP11.36□□□□□ -0.59
LCB1YMR296C SEC15P22224 910 aa11.36□□□□□ -0.59
LCB1YMR296C AAT2P23542 418 aaKnown RBP11.36□□□□□ -0.59
LCB1YMR296C PYC2P32327 1180 aaKnown RBP11.36□□□□□ -0.59
LCB1YMR296C YME2P32843 850 aa11.36□□□□□ -0.59
LCB1YMR296C CSE1P33307 960 aa11.36□□□□□ -0.59
LCB1YMR296C SLX8P40072 274 aa11.36□□□□□ -0.59
LCB1YMR296C SEC28P40509 296 aaKnown RBP11.36□□□□□ -0.59
LCB1YMR296C SET2P46995 733 aaKnown RBP11.36□□□□□ -0.59
LCB1YMR296C NPY1P53164 384 aa11.36□□□□□ -0.59
LCB1YMR296C YTP1P53584 459 aa11.36□□□□□ -0.59
LCB1YMR296C CUS2P53830 285 aaPredicted RBP11.36□□□□□ -0.59
LCB1YMR296C PRO2P54885 456 aaKnown RBP11.36□□□□□ -0.59
LCB1YMR296C RPM2Q02773 1202 aa11.36□□□□□ -0.59
LCB1YMR296C ASA1Q06822 443 aa11.36□□□□□ -0.59
LCB1YMR296C RUP1Q12242 671 aa11.36□□□□□ -0.59
LCB1YMR296C ACO1P19414 778 aaKnown RBP RIP-Chip data11.35□□□□□ -0.59not detected
LCB1YMR296C PXA2P34230 853 aa11.35□□□□□ -0.59
LCB1YMR296C MRP21P38175 177 aa11.35□□□□□ -0.59
LCB1YMR296C GIP1P38229 639 aa11.35□□□□□ -0.59
LCB1YMR296C VMA13P41807 478 aaKnown RBP11.35□□□□□ -0.59
LCB1YMR296C FMP33P46998 180 aa11.35□□□□□ -0.59
LCB1YMR296C YGR016WP53209 190 aa11.35□□□□□ -0.59
LCB1YMR296C PRM1P53835 661 aa11.35□□□□□ -0.59
LCB1YMR296C REX2P54964 269 aaKnown RBP11.35□□□□□ -0.59
LCB1YMR296C HPF1Q05164 967 aa11.35□□□□□ -0.59
LCB1YMR296C PGC1Q08959 321 aa11.35□□□□□ -0.59
LCB1YMR296C ATP2P00830 511 aaKnown RBP11.34□□□□□ -0.59
LCB1YMR296C DPH5P32469 300 aaPredicted RBP11.34□□□□□ -0.59
LCB1YMR296C TCD2P36101 447 aaKnown RBP11.34□□□□□ -0.59
LCB1YMR296C ALY1P36117 915 aa11.34□□□□□ -0.59
LCB1YMR296C SIC1P38634 284 aa11.34□□□□□ -0.59
LCB1YMR296C MNN1P39106 762 aa11.34□□□□□ -0.59
LCB1YMR296C HPM1P40481 377 aa11.34□□□□□ -0.59
LCB1YMR296C GVP36P40531 326 aaKnown RBP11.34□□□□□ -0.59
LCB1YMR296C ORC3P54790 616 aa11.34□□□□□ -0.59
LCB1YMR296C SMA1Q02651 245 aa11.34□□□□□ -0.59
LCB1YMR296C HMO1Q03973 246 aaKnown RBP11.34□□□□□ -0.59
LCB1YMR296C HPT1Q04178 221 aaKnown RBP11.34□□□□□ -0.59
LCB1YMR296C MFB1Q04922 465 aa11.34□□□□□ -0.59
LCB1YMR296C RMD5Q12508 421 aa11.34□□□□□ -0.59
LCB1YMR296C YPL247CQ12523 523 aa11.34□□□□□ -0.59
LCB1YMR296C CAN1P04817 590 aa11.33□□□□□ -0.6
LCB1YMR296C NSP1P14907 823 aaKnown RBP11.33□□□□□ -0.6
LCB1YMR296C PTC1P35182 281 aa11.33□□□□□ -0.6
LCB1YMR296C PPX1P38698 397 aa11.33□□□□□ -0.6
LCB1YMR296C PIK1P39104 1066 aa11.33□□□□□ -0.6
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms