RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeastyeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC22YLR268W MOT3P54785 490 aaKnown RBP2.55□□□□□ -2
SEC22YLR268W SWA2Q06677 668 aa2.55□□□□□ -2
SEC22YLR268W ADE3P07245 946 aaKnown RBP2.54□□□□□ -2
SEC22YLR268W RAP1P11938 827 aa2.54□□□□□ -2
SEC22YLR268W TKL1P23254 680 aaKnown RBP2.54□□□□□ -2
SEC22YLR268W SOF1P33750 489 aaKnown RBP2.54□□□□□ -2
SEC22YLR268W ADE17P38009 592 aaKnown RBP2.54□□□□□ -2
SEC22YLR268W YJL132WP47014 750 aa2.54□□□□□ -2
SEC22YLR268W YDL186WP48568 277 aa2.54□□□□□ -2
SEC22YLR268W VMS1Q04311 632 aaKnown RBP2.54□□□□□ -2
SEC22YLR268W EIS1Q05050 843 aaKnown RBP2.54□□□□□ -2
SEC22YLR268W SWT1Q12104 458 aa2.54□□□□□ -2
SEC22YLR268W SUL2Q12325 893 aa2.54□□□□□ -2
SEC22YLR268W MRS3P10566 314 aa2.53□□□□□ -2
SEC22YLR268W SPO16P17122 198 aa2.53□□□□□ -2
SEC22YLR268W MCM3P24279 971 aaKnown RBP2.53□□□□□ -2
SEC22YLR268W GID7P25569 745 aa2.53□□□□□ -2
SEC22YLR268W PWP2P25635 923 aaKnown RBP2.53□□□□□ -2
SEC22YLR268W SAC1P32368 623 aaKnown RBP2.53□□□□□ -2
SEC22YLR268W PTH2P34222 208 aa2.53□□□□□ -2
SEC22YLR268W VPS24P36095 224 aaKnown RBP2.53□□□□□ -2
SEC22YLR268W SPC72P39723 622 aa2.53□□□□□ -2
SEC22YLR268W ACA1P39970 489 aa2.53□□□□□ -2
SEC22YLR268W TAM41P53230 385 aa2.53□□□□□ -2
SEC22YLR268W CPR6P53691 371 aaKnown RBP2.53□□□□□ -2
SEC22YLR268W KRS1P15180 591 aaKnown RBP2.52□□□□□ -2.01
SEC22YLR268W APA1P16550 321 aaKnown RBP2.52□□□□□ -2.01
SEC22YLR268W MSM1P22438 575 aa2.52□□□□□ -2.01
SEC22YLR268W ARP2P32381 391 aaKnown RBP2.52□□□□□ -2.01
SEC22YLR268W MRS6P32864 603 aaKnown RBP2.52□□□□□ -2.01
SEC22YLR268W MIC60P36112 540 aa2.52□□□□□ -2.01
SEC22YLR268W UBP13P38187 747 aa2.52□□□□□ -2.01
SEC22YLR268W RFC1P38630 861 aaKnown RBP2.52□□□□□ -2.01
SEC22YLR268W FSH1P38777 243 aaKnown RBP2.52□□□□□ -2.01
SEC22YLR268W BUD16P39988 312 aa2.52□□□□□ -2.01
SEC22YLR268W YJL068CP40363 299 aa2.52□□□□□ -2.01
SEC22YLR268W HXT9P40885 567 aa2.52□□□□□ -2.01
SEC22YLR268W MAK10Q02197 733 aa2.52□□□□□ -2.01
SEC22YLR268W ATG16Q03818 150 aa2.52□□□□□ -2.01
SEC22YLR268W HCR1Q05775 265 aaKnown RBP2.52□□□□□ -2.01
SEC22YLR268W EDE1P34216 1381 aa2.51□□□□□ -2.01
SEC22YLR268W SWI4P25302 1093 aaKnown RBP2.51□□□□□ -2.01
SEC22YLR268W FUI1P38196 639 aa2.51□□□□□ -2.01
SEC22YLR268W IES5P40060 125 aa2.51□□□□□ -2.01
SEC22YLR268W SAP185P40856 1058 aa2.51□□□□□ -2.01
SEC22YLR268W GUF1P46943 645 aa2.51□□□□□ -2.01
SEC22YLR268W IMA1P53051 589 aa2.51□□□□□ -2.01
SEC22YLR268W CSR1Q06705 408 aaKnown RBP2.51□□□□□ -2.01
SEC22YLR268W CHO1P08456 276 aa2.5□□□□□ -2.01
SEC22YLR268W YML003WP0CF16 290 aa2.5□□□□□ -2.01
SEC22YLR268W BIK1P11709 440 aa2.5□□□□□ -2.01
SEC22YLR268W RPS2P25443 254 aaKnown RBP2.5□□□□□ -2.01
SEC22YLR268W YCL049CP25577 312 aa2.5□□□□□ -2.01
SEC22YLR268W DBF20P32328 564 aa2.5□□□□□ -2.01
SEC22YLR268W MRPL36P36531 177 aa2.5□□□□□ -2.01
SEC22YLR268W YBP1P38315 674 aa2.5□□□□□ -2.01
SEC22YLR268W PUG1P40100 303 aa2.5□□□□□ -2.01
SEC22YLR268W RGI2P40188 164 aa2.5□□□□□ -2.01
SEC22YLR268W RPT2P40327 437 aaKnown RBP2.5□□□□□ -2.01
SEC22YLR268W CTK2P46962 323 aa2.5□□□□□ -2.01
SEC22YLR268W BLS1Q06071 122 aa2.5□□□□□ -2.01
SEC22YLR268W GDH1P07262 454 aaKnown RBP2.49□□□□□ -2.01
SEC22YLR268W CLB2P24869 491 aa2.49□□□□□ -2.01
SEC22YLR268W CLB4P24871 460 aa2.49□□□□□ -2.01
SEC22YLR268W YSP3P25036 478 aa2.49□□□□□ -2.01
SEC22YLR268W DPB3P27344 201 aa2.49□□□□□ -2.01
SEC22YLR268W HXT1P32465 570 aa2.49□□□□□ -2.01
SEC22YLR268W YBR138CP38277 524 aa2.49□□□□□ -2.01
SEC22YLR268W SEC31P38968 1273 aaKnown RBP2.49□□□□□ -2.01
SEC22YLR268W PRE5P40302 234 aaKnown RBP2.49□□□□□ -2.01
SEC22YLR268W YGL082WP53155 381 aa2.49□□□□□ -2.01
SEC22YLR268W RBG2P53295 368 aaKnown RBP2.49□□□□□ -2.01
SEC22YLR268W ARC35P53731 342 aaKnown RBP2.49□□□□□ -2.01
SEC22YLR268W TMA64Q04600 565 aaKnown RBP2.49□□□□□ -2.01
SEC22YLR268W STP3Q05937 343 aa2.49□□□□□ -2.01
SEC22YLR268W CRN1Q06440 651 aa2.49□□□□□ -2.01
SEC22YLR268W YDL218WQ07629 317 aa2.49□□□□□ -2.01
SEC22YLR268W ATP2P00830 511 aaKnown RBP2.48□□□□□ -2.01
SEC22YLR268W MTF2P10849 440 aa2.48□□□□□ -2.01
SEC22YLR268W CDC15P27636 974 aa2.48□□□□□ -2.01
SEC22YLR268W ERG1P32476 496 aaKnown RBP2.48□□□□□ -2.01
SEC22YLR268W YNK1P36010 153 aaKnown RBP2.48□□□□□ -2.01
SEC22YLR268W AAP1P37898 856 aaKnown RBP2.48□□□□□ -2.01
SEC22YLR268W ERG7P38604 731 aa2.48□□□□□ -2.01
SEC22YLR268W NPR3P38742 1146 aa2.48□□□□□ -2.01
SEC22YLR268W MTC6P38849 526 aa2.48□□□□□ -2.01
SEC22YLR268W YJL213WP40896 331 aa2.48□□□□□ -2.01
SEC22YLR268W ERR3P42222 437 aa2.48□□□□□ -2.01
SEC22YLR268W YGR021WP53212 290 aa2.48□□□□□ -2.01
SEC22YLR268W NNF2P53253 936 aa2.48□□□□□ -2.01
SEC22YLR268W TRS130Q03660 1102 aa2.48□□□□□ -2.01
SEC22YLR268W CIA1Q05583 330 aa2.48□□□□□ -2.01
SEC22YLR268W SSM4P40318 1319 aa2.47□□□□□ -2.01
SEC22YLR268W NUC1P08466 329 aa2.47□□□□□ -2.01
SEC22YLR268W PET111P08468 800 aa2.47□□□□□ -2.01
SEC22YLR268W NCP1P16603 691 aaKnown RBP2.47□□□□□ -2.01
SEC22YLR268W TRX2P22803 104 aaKnown RBP2.47□□□□□ -2.01
SEC22YLR268W RAD16P31244 790 aa2.47□□□□□ -2.01
SEC22YLR268W XRS2P33301 854 aa2.47□□□□□ -2.01
SEC22YLR268W PSF2P40359 213 aa2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms