RNA–Protein interactions for RNA: YLR211C

ATG38, Transcript of Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I, yeastyeast

Gene ATG38, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG38YLR211C YNL234WP53857 426 aa3.58□□□□□ -1.84
ATG38YLR211C PHO81P17442 1178 aa3.57□□□□□ -1.84
ATG38YLR211C UBC1P21734 215 aaKnown RBP3.57□□□□□ -1.84
ATG38YLR211C PSD1P39006 500 aa3.57□□□□□ -1.84
ATG38YLR211C YIL060WP40519 144 aa3.57□□□□□ -1.84
ATG38YLR211C ASE1P50275 885 aa3.57□□□□□ -1.84
ATG38YLR211C CTL1Q03220 320 aaKnown RBP3.57□□□□□ -1.84
ATG38YLR211C SCW10Q04951 389 aa3.57□□□□□ -1.84
ATG38YLR211C YOL057WQ08225 711 aa3.57□□□□□ -1.84
ATG38YLR211C RPN2P32565 945 aaKnown RBP3.56□□□□□ -1.84
ATG38YLR211C PKP2P53170 491 aa3.56□□□□□ -1.84
ATG38YLR211C RSF1Q05043 376 aa3.56□□□□□ -1.84
ATG38YLR211C VCX1Q99385 411 aa3.56□□□□□ -1.84
ATG38YLR211C TPK1P06244 397 aa3.55□□□□□ -1.84
ATG38YLR211C NUC1P08466 329 aa3.55□□□□□ -1.84
ATG38YLR211C YJL070CP40361 888 aa3.55□□□□□ -1.84
ATG38YLR211C FAF1P40546 346 aaPredicted RBP3.55□□□□□ -1.84
ATG38YLR211C MRPL13Q02204 264 aa3.55□□□□□ -1.84
ATG38YLR211C NUP100Q02629 959 aa3.55□□□□□ -1.84
ATG38YLR211C YLR352WQ06479 807 aa3.55□□□□□ -1.84
ATG38YLR211C YDL218WQ07629 317 aa3.55□□□□□ -1.84
ATG38YLR211C DAP1Q12091 152 aa3.55□□□□□ -1.84
ATG38YLR211C ATG9Q12142 997 aa3.55□□□□□ -1.84
ATG38YLR211C TIP41Q12199 356 aa3.55□□□□□ -1.84
ATG38YLR211C KRS1P15180 591 aaKnown RBP3.54□□□□□ -1.84
ATG38YLR211C GLN3P18494 730 aa3.54□□□□□ -1.84
ATG38YLR211C PHO90P39535 881 aa3.54□□□□□ -1.84
ATG38YLR211C YIR014WP40570 242 aa3.54□□□□□ -1.84
ATG38YLR211C IAH1P41734 238 aa3.54□□□□□ -1.84
ATG38YLR211C BNA1P47096 177 aa3.54□□□□□ -1.84
ATG38YLR211C CTF18P49956 741 aa3.54□□□□□ -1.84
ATG38YLR211C UBX4P54730 416 aa3.54□□□□□ -1.84
ATG38YLR211C REG1Q00816 1014 aa3.54□□□□□ -1.84
ATG38YLR211C ADE13Q05911 482 aaKnown RBP3.54□□□□□ -1.84
ATG38YLR211C YOR019WQ99248 730 aa3.54□□□□□ -1.84
ATG38YLR211C PGI1P12709 554 aaKnown RBP3.53□□□□□ -1.84
ATG38YLR211C PMS1P14242 873 aa3.53□□□□□ -1.84
ATG38YLR211C GUK1P15454 187 aaKnown RBP3.53□□□□□ -1.84
ATG38YLR211C ERG8P24521 451 aa3.53□□□□□ -1.84
ATG38YLR211C GID7P25569 745 aa3.53□□□□□ -1.84
ATG38YLR211C TFC3P34111 1160 aa3.53□□□□□ -1.84
ATG38YLR211C ESL2P36168 1195 aa3.53□□□□□ -1.84
ATG38YLR211C RIM2P38127 377 aa3.53□□□□□ -1.84
ATG38YLR211C KRE9P39005 276 aa3.53□□□□□ -1.84
ATG38YLR211C YER130CP39959 443 aa3.53□□□□□ -1.84
ATG38YLR211C GUF1P46943 645 aa3.53□□□□□ -1.84
ATG38YLR211C PAP2P53632 584 aaKnown RBP3.53□□□□□ -1.84
ATG38YLR211C FCP1Q03254 732 aa3.53□□□□□ -1.84
ATG38YLR211C PSK2Q08217 1101 aa3.53□□□□□ -1.84
ATG38YLR211C CSR2Q12734 1121 aa3.53□□□□□ -1.84
ATG38YLR211C YML002WP0CF17 737 aa3.52□□□□□ -1.85
ATG38YLR211C RPB8P20436 146 aa3.52□□□□□ -1.85
ATG38YLR211C GAC1P28006 793 aa3.52□□□□□ -1.85
ATG38YLR211C MRPL36P36531 177 aa3.52□□□□□ -1.85
ATG38YLR211C STV1P37296 890 aa3.52□□□□□ -1.85
ATG38YLR211C PFK26P40433 827 aaKnown RBP3.52□□□□□ -1.85
ATG38YLR211C AZF1P41696 914 aa3.52□□□□□ -1.85
ATG38YLR211C BLS1Q06071 122 aa3.52□□□□□ -1.85
ATG38YLR211C CSR1Q06705 408 aaKnown RBP3.52□□□□□ -1.85
ATG38YLR211C MRS3P10566 314 aa3.51□□□□□ -1.85
ATG38YLR211C PDA1P16387 420 aaKnown RBP3.51□□□□□ -1.85
ATG38YLR211C DBF20P32328 564 aa3.51□□□□□ -1.85
ATG38YLR211C TRS65P32893 560 aa3.51□□□□□ -1.85
ATG38YLR211C YOX1P34161 385 aa3.51□□□□□ -1.85
ATG38YLR211C MIA40P36046 403 aa3.51□□□□□ -1.85
ATG38YLR211C IST3P40565 148 aaPredicted RBP3.51□□□□□ -1.85
ATG38YLR211C CRZ1P53968 678 aa3.51□□□□□ -1.85
ATG38YLR211C RAD16P31244 790 aa3.5□□□□□ -1.85
ATG38YLR211C ERG7P38604 731 aa3.5□□□□□ -1.85
ATG38YLR211C SEC24P40482 926 aaKnown RBP3.5□□□□□ -1.85
ATG38YLR211C YDR415CQ04033 374 aaPredicted RBP3.5□□□□□ -1.85
ATG38YLR211C ATG26Q06321 1198 aa3.5□□□□□ -1.85
ATG38YLR211C TRM8Q12009 286 aa3.5□□□□□ -1.85
ATG38YLR211C YBR298C-AQ8TGK4 73 aa3.5□□□□□ -1.85
ATG38YLR211C PRP16P15938 1071 aaPredicted RBP3.49□□□□□ -1.85
ATG38YLR211C PGS1P25578 521 aa3.49□□□□□ -1.85
ATG38YLR211C SPC34P36131 295 aa3.49□□□□□ -1.85
ATG38YLR211C DHH1P39517 506 aaKnown RBP3.49□□□□□ -1.85
ATG38YLR211C PKP1P40530 394 aa3.49□□□□□ -1.85
ATG38YLR211C VPS4P52917 437 aa3.49□□□□□ -1.85
ATG38YLR211C NNF2P53253 936 aa3.49□□□□□ -1.85
ATG38YLR211C IST1P53843 298 aaPredicted RBP3.49□□□□□ -1.85
ATG38YLR211C IMP4P53941 290 aaKnown RBP3.49□□□□□ -1.85
ATG38YLR211C YMR178WQ03219 274 aaKnown RBP3.49□□□□□ -1.85
ATG38YLR211C TMA64Q04600 565 aaKnown RBP3.49□□□□□ -1.85
ATG38YLR211C ERG27Q12452 347 aaKnown RBP3.49□□□□□ -1.85
ATG38YLR211C LOS1P33418 1100 aaPredicted RBP3.48□□□□□ -1.85
ATG38YLR211C RGI2P40188 164 aa3.48□□□□□ -1.85
ATG38YLR211C SMK1P41808 388 aa3.48□□□□□ -1.85
ATG38YLR211C IME4P41833 600 aa3.48□□□□□ -1.85
ATG38YLR211C STR3P53101 465 aaKnown RBP3.48□□□□□ -1.85
ATG38YLR211C ZDS2P54786 942 aa3.48□□□□□ -1.85
ATG38YLR211C HXK2P04807 486 aaKnown RBP3.47□□□□□ -1.85
ATG38YLR211C SNF1P06782 633 aaKnown RBP3.47□□□□□ -1.85
ATG38YLR211C ERG1P32476 496 aaKnown RBP3.47□□□□□ -1.85
ATG38YLR211C UBA4P38820 440 aa3.47□□□□□ -1.85
ATG38YLR211C ANS1P38832 159 aa3.47□□□□□ -1.85
ATG38YLR211C RTS1P38903 757 aa3.47□□□□□ -1.85
ATG38YLR211C FMP10P40098 244 aa3.47□□□□□ -1.85
ATG38YLR211C DPB11P47027 764 aaPredicted RBP3.47□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms