RNA–Protein interactions for RNA: YLR003C

CMS1, Transcript of Putative subunit of the 90S preribosome processome complex, yeastyeast

Gene CMS1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMS1YLR003C URK1P27515 501 aa2.84□□□□□ -1.95
CMS1YLR003C VPS24P36095 224 aaKnown RBP2.84□□□□□ -1.95
CMS1YLR003C YIL161WP40449 235 aaKnown RBP2.84□□□□□ -1.95
CMS1YLR003C YIR014WP40570 242 aa2.84□□□□□ -1.95
CMS1YLR003C ARC35P53731 342 aaKnown RBP2.84□□□□□ -1.95
CMS1YLR003C YDR415CQ04033 374 aaPredicted RBP2.84□□□□□ -1.95
CMS1YLR003C RSF1Q05043 376 aa2.84□□□□□ -1.95
CMS1YLR003C YLL056CQ12177 298 aa2.84□□□□□ -1.95
CMS1YLR003C ATP2P00830 511 aaKnown RBP2.83□□□□□ -1.96
CMS1YLR003C TRX2P22803 104 aaKnown RBP2.83□□□□□ -1.96
CMS1YLR003C YCL049CP25577 312 aa2.83□□□□□ -1.96
CMS1YLR003C PWP2P25635 923 aaKnown RBP2.83□□□□□ -1.96
CMS1YLR003C RFA2P26754 273 aaKnown RBP2.83□□□□□ -1.96
CMS1YLR003C TEF4P36008 412 aaKnown RBP2.83□□□□□ -1.96
CMS1YLR003C IFA38P38286 347 aa2.83□□□□□ -1.96
CMS1YLR003C IMA1P53051 589 aa2.83□□□□□ -1.96
CMS1YLR003C COG1P53079 417 aa2.83□□□□□ -1.96
CMS1YLR003C CSR1Q06705 408 aaKnown RBP2.83□□□□□ -1.96
CMS1YLR003C PSR2Q07949 397 aa2.83□□□□□ -1.96
CMS1YLR003C PDR3P33200 976 aa2.82□□□□□ -1.96
CMS1YLR003C CNS1P33313 385 aa2.82□□□□□ -1.96
CMS1YLR003C SLC1P33333 303 aa2.82□□□□□ -1.96
CMS1YLR003C PSY4P38193 441 aa2.82□□□□□ -1.96
CMS1YLR003C MSY1P48527 492 aa2.82□□□□□ -1.96
CMS1YLR003C CIA1Q05583 330 aa2.82□□□□□ -1.96
CMS1YLR003C YLR455WQ06188 304 aa2.82□□□□□ -1.96
CMS1YLR003C PCD1Q12524 340 aa2.82□□□□□ -1.96
CMS1YLR003C PHM8P40025 321 aa2.81□□□□□ -1.96
CMS1YLR003C YGL242CP53066 181 aa2.81□□□□□ -1.96
CMS1YLR003C YGR021WP53212 290 aa2.81□□□□□ -1.96
CMS1YLR003C ASI1P54074 624 aa2.81□□□□□ -1.96
CMS1YLR003C GTB1Q04924 702 aa2.81□□□□□ -1.96
CMS1YLR003C SWT1Q12104 458 aa2.81□□□□□ -1.96
CMS1YLR003C YLR302CO13544 120 aa2.8□□□□□ -1.96
CMS1YLR003C TY2A-LR1P0C2J4 438 aa2.8□□□□□ -1.96
CMS1YLR003C TY2A-FP0CX61 438 aa2.8□□□□□ -1.96
CMS1YLR003C TY2A-GR2P0CX62 438 aa2.8□□□□□ -1.96
CMS1YLR003C MRP2P10663 115 aaPredicted RBP2.8□□□□□ -1.96
CMS1YLR003C UBC1P21734 215 aaKnown RBP2.8□□□□□ -1.96
CMS1YLR003C YSP3P25036 478 aa2.8□□□□□ -1.96
CMS1YLR003C TY2A-CP25383 438 aa2.8□□□□□ -1.96
CMS1YLR003C ADE17P38009 592 aaKnown RBP2.8□□□□□ -1.96
CMS1YLR003C KTR3P38130 404 aaPredicted RBP2.8□□□□□ -1.96
CMS1YLR003C NPR3P38742 1146 aa2.8□□□□□ -1.96
CMS1YLR003C MDM31P38880 579 aa2.8□□□□□ -1.96
CMS1YLR003C RTS1P38903 757 aa2.8□□□□□ -1.96
CMS1YLR003C BUD16P39988 312 aa2.8□□□□□ -1.96
CMS1YLR003C IES5P40060 125 aa2.8□□□□□ -1.96
CMS1YLR003C SGF73P53165 657 aa2.8□□□□□ -1.96
CMS1YLR003C REG1Q00816 1014 aa2.8□□□□□ -1.96
CMS1YLR003C TY2A-DR2Q03483 438 aa2.8□□□□□ -1.96
CMS1YLR003C YMR018WQ04364 514 aa2.8□□□□□ -1.96
CMS1YLR003C TMA16Q08687 178 aa2.8□□□□□ -1.96
CMS1YLR003C YLR049CQ12110 428 aa2.8□□□□□ -1.96
CMS1YLR003C TY2A-BQ12260 438 aa2.8□□□□□ -1.96
CMS1YLR003C TY2A-OR2Q12293 438 aa2.8□□□□□ -1.96
CMS1YLR003C TY2A-DR1Q12392 438 aa2.8□□□□□ -1.96
CMS1YLR003C TY2A-OR1Q12439 438 aa2.8□□□□□ -1.96
CMS1YLR003C TY2A-DR3Q99303 438 aa2.8□□□□□ -1.96
CMS1YLR003C CHO1P08456 276 aa2.79□□□□□ -1.96
CMS1YLR003C MTF2P10849 440 aa2.79□□□□□ -1.96
CMS1YLR003C LRE1P25579 583 aaKnown RBP2.79□□□□□ -1.96
CMS1YLR003C DPB3P27344 201 aa2.79□□□□□ -1.96
CMS1YLR003C XRS2P33301 854 aa2.79□□□□□ -1.96
CMS1YLR003C UBP13P38187 747 aa2.79□□□□□ -1.96
CMS1YLR003C PFK26P40433 827 aaKnown RBP2.79□□□□□ -1.96
CMS1YLR003C IST3P40565 148 aaPredicted RBP2.79□□□□□ -1.96
CMS1YLR003C ASE1P50275 885 aa2.79□□□□□ -1.96
CMS1YLR003C YML131WQ03102 365 aa2.79□□□□□ -1.96
CMS1YLR003C MCP2Q06567 569 aa2.79□□□□□ -1.96
CMS1YLR003C SWA2Q06677 668 aa2.79□□□□□ -1.96
CMS1YLR003C VAM6Q07468 1049 aa2.79□□□□□ -1.96
CMS1YLR003C ERG27Q12452 347 aaKnown RBP2.79□□□□□ -1.96
CMS1YLR003C SPO16P17122 198 aa2.78□□□□□ -1.96
CMS1YLR003C GLN3P18494 730 aa2.78□□□□□ -1.96
CMS1YLR003C STE50P25344 346 aa2.78□□□□□ -1.96
CMS1YLR003C KAP123P40069 1113 aaKnown RBP2.78□□□□□ -1.96
CMS1YLR003C RIC1P40395 1056 aa2.78□□□□□ -1.96
CMS1YLR003C DJP1P40564 432 aa2.78□□□□□ -1.96
CMS1YLR003C IAH1P41734 238 aa2.78□□□□□ -1.96
CMS1YLR003C RRT6P53117 311 aaPredicted RBP2.78□□□□□ -1.96
CMS1YLR003C YMR178WQ03219 274 aaKnown RBP2.78□□□□□ -1.96
CMS1YLR003C PFA5Q03289 374 aa2.78□□□□□ -1.96
CMS1YLR003C EKI1Q03764 534 aa2.78□□□□□ -1.96
CMS1YLR003C VID22Q05934 901 aa2.78□□□□□ -1.96
CMS1YLR003C EDE1P34216 1381 aa2.77□□□□□ -1.97
CMS1YLR003C SNF1P06782 633 aaKnown RBP2.77□□□□□ -1.97
CMS1YLR003C BIK1P11709 440 aa2.77□□□□□ -1.97
CMS1YLR003C MTC6P38849 526 aa2.77□□□□□ -1.97
CMS1YLR003C HXT9P40885 567 aa2.77□□□□□ -1.97
CMS1YLR003C FET5P43561 622 aa2.77□□□□□ -1.97
CMS1YLR003C CTF18P49956 741 aa2.77□□□□□ -1.97
CMS1YLR003C RBG2P53295 368 aaKnown RBP2.77□□□□□ -1.97
CMS1YLR003C CRN1Q06440 651 aa2.77□□□□□ -1.97
CMS1YLR003C ATG23Q06671 453 aa2.77□□□□□ -1.97
CMS1YLR003C TRM8Q12009 286 aa2.77□□□□□ -1.97
CMS1YLR003C BAG7Q12128 409 aa2.77□□□□□ -1.97
CMS1YLR003C PET111P08468 800 aa2.76□□□□□ -1.97
CMS1YLR003C YML003WP0CF16 290 aa2.76□□□□□ -1.97
CMS1YLR003C RPS2P25443 254 aaKnown RBP2.76□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms