RNA–Protein interactions for RNA: YKL213C

DOA1, Transcript of WD repeat protein required for ubiquitin-mediated protein degradation, yeast

Gene DOA1, Length 2,148 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOA1	YKL213C	PLP1	Q04004	230 aa		4.93	□□□□□ -1.62
DOA1	YKL213C	DYN3	Q04949	312 aa		4.93	□□□□□ -1.62
DOA1	YKL213C	ECM38	Q05902	660 aa	Predicted RBP	4.93	□□□□□ -1.62
DOA1	YKL213C	GRX8	Q05926	109 aa		4.93	□□□□□ -1.62
DOA1	YKL213C	EAF1	Q06337	982 aa		4.93	□□□□□ -1.62
DOA1	YKL213C	NSE1	Q07913	336 aa		4.93	□□□□□ -1.62
DOA1	YKL213C	YOR289W	Q12012	251 aa	Predicted RBP	4.93	□□□□□ -1.62
DOA1	YKL213C	YLL056C	Q12177	298 aa		4.93	□□□□□ -1.62
DOA1	YKL213C	ARG81	P05085	880 aa		4.93	□□□□□ -1.62
DOA1	YKL213C	MST1	P07236	462 aa		4.93	□□□□□ -1.62
DOA1	YKL213C	SIR1	P21691	654 aa		4.93	□□□□□ -1.62
DOA1	YKL213C	NPP1	P25353	742 aa		4.93	□□□□□ -1.62
DOA1	YKL213C	SPB1	P25582	841 aa	Predicted RBP	4.93	□□□□□ -1.62
DOA1	YKL213C	GPI10	P30777	616 aa		4.93	□□□□□ -1.62
DOA1	YKL213C	MEI5	P32489	222 aa		4.93	□□□□□ -1.62
DOA1	YKL213C	ATG12	P38316	186 aa		4.93	□□□□□ -1.62
DOA1	YKL213C	POP4	P38336	279 aa		4.93	□□□□□ -1.62
DOA1	YKL213C	BIT2	P38346	545 aa		4.93	□□□□□ -1.62
DOA1	YKL213C	LRP1	P38801	184 aa	Known RBP	4.93	□□□□□ -1.62
DOA1	YKL213C	UTP9	P38882	575 aa	Known RBP	4.93	□□□□□ -1.62
DOA1	YKL213C	STL1	P39932	569 aa		4.93	□□□□□ -1.62
DOA1	YKL213C	RPL34B	P40525	121 aa	Known RBP	4.93	□□□□□ -1.62
DOA1	YKL213C	AGE2	P40529	298 aa		4.93	□□□□□ -1.62
DOA1	YKL213C	PKP1	P40530	394 aa		4.93	□□□□□ -1.62
DOA1	YKL213C	SNG1	P46950	547 aa		4.93	□□□□□ -1.62
DOA1	YKL213C	VMA10	P48836	114 aa	Known RBP	4.93	□□□□□ -1.62
DOA1	YKL213C	ZIP2	P53061	704 aa		4.93	□□□□□ -1.62
DOA1	YKL213C	YGR127W	P53275	312 aa		4.93	□□□□□ -1.62
DOA1	YKL213C	DML1	Q03652	475 aa		4.93	□□□□□ -1.62
DOA1	YKL213C	REH1	Q06709	432 aa		4.93	□□□□□ -1.62
DOA1	YKL213C	GYP1	Q08484	637 aa		4.93	□□□□□ -1.62
DOA1	YKL213C	YOR387C	Q08910	206 aa		4.93	□□□□□ -1.62
DOA1	YKL213C	ACM1	Q08981	209 aa		4.93	□□□□□ -1.62
DOA1	YKL213C	STB3	Q12427	513 aa		4.93	□□□□□ -1.62
DOA1	YKL213C	EFG1	Q3E705	233 aa	Known RBP	4.93	□□□□□ -1.62
DOA1	YKL213C	DSF1	P0CX08	502 aa		4.92	□□□□□ -1.62
DOA1	YKL213C	YNR073C	P0CX09	502 aa		4.92	□□□□□ -1.62
DOA1	YKL213C	ADH4	P10127	382 aa		4.92	□□□□□ -1.62
DOA1	YKL213C	HCM1	P25364	564 aa		4.92	□□□□□ -1.62
DOA1	YKL213C	ADY2	P25613	283 aa		4.92	□□□□□ -1.62
DOA1	YKL213C	GUT1	P32190	709 aa		4.92	□□□□□ -1.62
DOA1	YKL213C	RAD5	P32849	1169 aa	Predicted RBP	4.92	□□□□□ -1.62
DOA1	YKL213C	AIM26	P32858	118 aa		4.92	□□□□□ -1.62
DOA1	YKL213C	PPQ1	P32945	549 aa		4.92	□□□□□ -1.62
DOA1	YKL213C	LAS1	P36146	502 aa	Predicted RBP	4.92	□□□□□ -1.62
DOA1	YKL213C	ALG3	P38179	458 aa		4.92	□□□□□ -1.62
DOA1	YKL213C	MED6	P38782	295 aa		4.92	□□□□□ -1.62
DOA1	YKL213C	CKB2	P38930	258 aa		4.92	□□□□□ -1.62
DOA1	YKL213C	YEL028W	P39989	153 aa		4.92	□□□□□ -1.62
DOA1	YKL213C	YJR061W	P40355	935 aa		4.92	□□□□□ -1.62
DOA1	YKL213C	MND2	P40577	368 aa		4.92	□□□□□ -1.62
DOA1	YKL213C	EMW1	P42842	904 aa	Known RBP	4.92	□□□□□ -1.62
DOA1	YKL213C	LOC1	P43586	204 aa	Predicted RBP	4.92	□□□□□ -1.62
DOA1	YKL213C	RPS10B	P46784	105 aa	Known RBP	4.92	□□□□□ -1.62
DOA1	YKL213C	YJL132W	P47014	750 aa		4.92	□□□□□ -1.62
DOA1	YKL213C	RSM26	P47141	266 aa		4.92	□□□□□ -1.62
DOA1	YKL213C	TRM112	P53738	135 aa	Predicted RBP	4.92	□□□□□ -1.62
DOA1	YKL213C	NMA111	P53920	997 aa		4.92	□□□□□ -1.62
DOA1	YKL213C	HOT1	Q03213	719 aa		4.92	□□□□□ -1.62
DOA1	YKL213C	VPS16	Q03308	798 aa		4.92	□□□□□ -1.62
DOA1	YKL213C	PHO92	Q06390	306 aa		4.92	□□□□□ -1.62
DOA1	YKL213C	RPS10A	Q08745	105 aa	Predicted RBP	4.92	□□□□□ -1.62
DOA1	YKL213C	SMF3	Q12078	473 aa	Predicted RBP	4.92	□□□□□ -1.62
DOA1	YKL213C	AVL9	Q12500	764 aa		4.92	□□□□□ -1.62
DOA1	YKL213C	SEY1	Q99287	776 aa		4.92	□□□□□ -1.62
DOA1	YKL213C	CAN1	P04817	590 aa		4.91	□□□□□ -1.62
DOA1	YKL213C	GCR1	P07261	785 aa		4.91	□□□□□ -1.62
DOA1	YKL213C	CDC24	P11433	854 aa	Predicted RBP	4.91	□□□□□ -1.62
DOA1	YKL213C	FUS1	P11710	512 aa		4.91	□□□□□ -1.62
DOA1	YKL213C	MSS116	P15424	664 aa	Known RBP	4.91	□□□□□ -1.62
DOA1	YKL213C	SPO16	P17122	198 aa		4.91	□□□□□ -1.62
DOA1	YKL213C	YJU2	P28320	278 aa	Predicted RBP	4.91	□□□□□ -1.62
DOA1	YKL213C	MET22	P32179	357 aa		4.91	□□□□□ -1.62
DOA1	YKL213C	LYP1	P32487	611 aa		4.91	□□□□□ -1.62
DOA1	YKL213C	DOA4	P32571	926 aa		4.91	□□□□□ -1.62
DOA1	YKL213C	SGE1	P33335	543 aa		4.91	□□□□□ -1.62
DOA1	YKL213C	SEC66	P33754	206 aa		4.91	□□□□□ -1.62
DOA1	YKL213C	UTP11	P34247	250 aa	Predicted RBP	4.91	□□□□□ -1.62
DOA1	YKL213C	KTR4	P38131	464 aa		4.91	□□□□□ -1.62
DOA1	YKL213C	KAP104	P38217	918 aa	Known RBP	4.91	□□□□□ -1.62
DOA1	YKL213C	ALG14	P38242	237 aa		4.91	□□□□□ -1.62
DOA1	YKL213C	PPE1	P38796	400 aa		4.91	□□□□□ -1.62
DOA1	YKL213C	ATM1	P40416	690 aa		4.91	□□□□□ -1.62
DOA1	YKL213C	SYG1	P40528	902 aa		4.91	□□□□□ -1.62
DOA1	YKL213C	MVP1	P40959	511 aa	Known RBP	4.91	□□□□□ -1.62
DOA1	YKL213C	BST1	P43571	1029 aa		4.91	□□□□□ -1.62
DOA1	YKL213C	MIC19	P43594	170 aa		4.91	□□□□□ -1.62
DOA1	YKL213C	ABM1	P47146	123 aa		4.91	□□□□□ -1.62
DOA1	YKL213C	PRP24	P49960	444 aa	Known RBP	4.91	□□□□□ -1.62
DOA1	YKL213C	CGR1	P53188	120 aa		4.91	□□□□□ -1.62
DOA1	YKL213C	YGR266W	P53326	701 aa		4.91	□□□□□ -1.62
DOA1	YKL213C	TUB4	P53378	473 aa		4.91	□□□□□ -1.62
DOA1	YKL213C	YNR061C	P53747	219 aa		4.91	□□□□□ -1.62
DOA1	YKL213C	ERV25	P54837	211 aa	Known RBP	4.91	□□□□□ -1.62
DOA1	YKL213C	RSC4	Q02206	625 aa		4.91	□□□□□ -1.62
DOA1	YKL213C	TOF2	Q02208	771 aa		4.91	□□□□□ -1.62
DOA1	YKL213C	YDR131C	Q03899	556 aa		4.91	□□□□□ -1.62
DOA1	YKL213C	TMN2	Q04562	672 aa		4.91	□□□□□ -1.62
DOA1	YKL213C	RTN1	Q04947	295 aa	Known RBP	4.91	□□□□□ -1.62
DOA1	YKL213C	SEC10	Q06245	871 aa		4.91	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms