RNA–Protein interactions for RNA: YHR060W

VMA22, Transcript of Protein that is required for vacuolar H+-ATPase (V-ATPase) function, yeastyeast

Gene VMA22, Length 546 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA22YHR060W LAS21P40367 830 aa4.49□□□□□ -1.69
VMA22YHR060W SEC24P40482 926 aaKnown RBP4.49□□□□□ -1.69
VMA22YHR060W HXT14P42833 540 aa4.49□□□□□ -1.69
VMA22YHR060W LCL3P53153 274 aa4.49□□□□□ -1.69
VMA22YHR060W MRPS35P53292 345 aa4.49□□□□□ -1.69
VMA22YHR060W DAK1P54838 584 aaKnown RBP4.49□□□□□ -1.69
VMA22YHR060W YAT1P80235 687 aa4.49□□□□□ -1.69
VMA22YHR060W MFM1Q02783 413 aa4.49□□□□□ -1.69
VMA22YHR060W RSM28Q03430 361 aa4.49□□□□□ -1.69
VMA22YHR060W FIN1Q03898 291 aa4.49□□□□□ -1.69
VMA22YHR060W YMR111CQ04461 462 aaPredicted RBP4.49□□□□□ -1.69
VMA22YHR060W MGR3Q04472 501 aa4.49□□□□□ -1.69
VMA22YHR060W DON1Q05610 365 aa4.49□□□□□ -1.69
VMA22YHR060W FMP45Q07651 309 aa4.49□□□□□ -1.69
VMA22YHR060W RLP24Q07915 199 aaKnown RBP4.49□□□□□ -1.69
VMA22YHR060W YPL216WQ08964 1102 aa4.49□□□□□ -1.69
VMA22YHR060W YKL033W-AQ86ZR7 236 aa4.49□□□□□ -1.69
VMA22YHR060W MF(ALPHA)1P01149 165 aa4.48□□□□□ -1.69
VMA22YHR060W GAL80P04387 435 aa4.48□□□□□ -1.69
VMA22YHR060W RPL6BP05739 176 aaKnown RBP4.48□□□□□ -1.69
VMA22YHR060W RPC40P07703 335 aaKnown RBP4.48□□□□□ -1.69
VMA22YHR060W FUB1P25659 250 aa4.48□□□□□ -1.69
VMA22YHR060W SEC66P33754 206 aa4.48□□□□□ -1.69
VMA22YHR060W RPF2P36160 344 aaKnown RBP4.48□□□□□ -1.69
VMA22YHR060W MRPL7P36519 292 aa4.48□□□□□ -1.69
VMA22YHR060W CCL1P37366 393 aa4.48□□□□□ -1.69
VMA22YHR060W CCT6P39079 546 aa4.48□□□□□ -1.69
VMA22YHR060W MAM1P40065 302 aa4.48□□□□□ -1.69
VMA22YHR060W PCL7P40186 285 aa4.48□□□□□ -1.69
VMA22YHR060W FAR3P46671 204 aa4.48□□□□□ -1.69
VMA22YHR060W CTK2P46962 323 aa4.48□□□□□ -1.69
VMA22YHR060W IRC8P47046 822 aa4.48□□□□□ -1.69
VMA22YHR060W PET130P47065 347 aa4.48□□□□□ -1.69
VMA22YHR060W TCB2P48231 1178 aa4.48□□□□□ -1.69
VMA22YHR060W MUP1P50276 574 aa4.48□□□□□ -1.69
VMA22YHR060W UBC11P52492 156 aa4.48□□□□□ -1.69
VMA22YHR060W YGL036WP53185 909 aaPredicted RBP4.48□□□□□ -1.69
VMA22YHR060W YGR079WP53249 370 aa4.48□□□□□ -1.69
VMA22YHR060W YGR111WP53265 400 aa4.48□□□□□ -1.69
VMA22YHR060W YGR127WP53275 312 aa4.48□□□□□ -1.69
VMA22YHR060W HST1P53685 503 aa4.48□□□□□ -1.69
VMA22YHR060W IST1P53843 298 aaPredicted RBP4.48□□□□□ -1.69
VMA22YHR060W RPL6AQ02326 176 aaKnown RBP4.48□□□□□ -1.69
VMA22YHR060W USA1Q03714 838 aa4.48□□□□□ -1.69
VMA22YHR060W CRN1Q06440 651 aa4.48□□□□□ -1.69
VMA22YHR060W YDL073WQ07454 984 aa4.48□□□□□ -1.69
VMA22YHR060W MLH2Q07980 695 aa4.48□□□□□ -1.69
VMA22YHR060W AIM39Q08223 395 aa4.48□□□□□ -1.69
VMA22YHR060W CFT2Q12102 859 aaPredicted RBP4.48□□□□□ -1.69
VMA22YHR060W HXK2P04807 486 aaKnown RBP4.47□□□□□ -1.69
VMA22YHR060W TRP4P07285 380 aaPredicted RBP4.47□□□□□ -1.69
VMA22YHR060W ARD1P07347 238 aaPredicted RBP4.47□□□□□ -1.69
VMA22YHR060W PDA1P16387 420 aaKnown RBP4.47□□□□□ -1.69
VMA22YHR060W THR1P17423 357 aaKnown RBP4.47□□□□□ -1.69
VMA22YHR060W CDC5P32562 705 aa4.47□□□□□ -1.69
VMA22YHR060W GYP6P32806 458 aa4.47□□□□□ -1.69
VMA22YHR060W PMT1P33775 817 aa4.47□□□□□ -1.69
VMA22YHR060W DEF1P35732 738 aaKnown RBP4.47□□□□□ -1.69
VMA22YHR060W DIA4P38705 446 aaPredicted RBP4.47□□□□□ -1.69
VMA22YHR060W SEC31P38968 1273 aaKnown RBP4.47□□□□□ -1.69
VMA22YHR060W MRX1P40050 688 aa4.47□□□□□ -1.69
VMA22YHR060W BUR6P40096 142 aa4.47□□□□□ -1.69
VMA22YHR060W ELO3P40319 345 aa4.47□□□□□ -1.69
VMA22YHR060W PHO23P50947 330 aa4.47□□□□□ -1.69
VMA22YHR060W DIA3P52290 468 aa4.47□□□□□ -1.69
VMA22YHR060W IMO32P53219 342 aa4.47□□□□□ -1.69
VMA22YHR060W TOF1P53840 1238 aa4.47□□□□□ -1.69
VMA22YHR060W HOT1Q03213 719 aa4.47□□□□□ -1.69
VMA22YHR060W DPB4Q04603 196 aaKnown RBP4.47□□□□□ -1.69
VMA22YHR060W CRT10Q08226 957 aa4.47□□□□□ -1.69
VMA22YHR060W DCI1Q08558 271 aa4.47□□□□□ -1.69
VMA22YHR060W RPN5Q12250 445 aaKnown RBP4.47□□□□□ -1.69
VMA22YHR060W PRS5Q12265 496 aaKnown RBP4.47□□□□□ -1.69
VMA22YHR060W YML133CQ03099 1374 aa4.47□□□□□ -1.69
VMA22YHR060W YLL067CQ07888 1374 aa4.47□□□□□ -1.69
VMA22YHR060W YLL066CQ99208 1374 aa4.47□□□□□ -1.69
VMA22YHR060W EST1P17214 699 aaPredicted RBP4.46□□□□□ -1.7
VMA22YHR060W RFA2P26754 273 aaKnown RBP4.46□□□□□ -1.7
VMA22YHR060W POT1P27796 417 aaKnown RBP RIP-Chip data4.46□□□□□ -1.7not detected
VMA22YHR060W MSS1P32559 526 aaPredicted RBP4.46□□□□□ -1.7
VMA22YHR060W HIS7P33734 552 aaKnown RBP4.46□□□□□ -1.7
VMA22YHR060W SOF1P33750 489 aaKnown RBP4.46□□□□□ -1.7
VMA22YHR060W RRP1P35178 278 aaPredicted RBP4.46□□□□□ -1.7
VMA22YHR060W LHS1P36016 881 aa4.46□□□□□ -1.7
VMA22YHR060W EBP2P36049 427 aaKnown RBP4.46□□□□□ -1.7
VMA22YHR060W TCD2P36101 447 aaKnown RBP4.46□□□□□ -1.7
VMA22YHR060W AAP1P37898 856 aaKnown RBP4.46□□□□□ -1.7
VMA22YHR060W APL3P38065 1025 aa4.46□□□□□ -1.7
VMA22YHR060W WSS1P38838 269 aa4.46□□□□□ -1.7
VMA22YHR060W UIP3P39547 235 aa4.46□□□□□ -1.7
VMA22YHR060W EFM4P40516 257 aa4.46□□□□□ -1.7
VMA22YHR060W RPN11P43588 306 aaKnown RBP4.46□□□□□ -1.7
VMA22YHR060W YFR016CP43597 1233 aaKnown RBP4.46□□□□□ -1.7
VMA22YHR060W URB2P47108 1174 aa4.46□□□□□ -1.7
VMA22YHR060W PAN2P53010 1115 aaPredicted RBP4.46□□□□□ -1.7
VMA22YHR060W ERG5P54781 538 aa4.46□□□□□ -1.7
VMA22YHR060W RPA49Q01080 415 aaPredicted RBP4.46□□□□□ -1.7
VMA22YHR060W SOV1Q04748 898 aa4.46□□□□□ -1.7
VMA22YHR060W MRI1Q06489 411 aaKnown RBP4.46□□□□□ -1.7
VMA22YHR060W SWA2Q06677 668 aa4.46□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms