RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeastyeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT6YGR116W PUT4P15380 627 aa3.68□□□□□ -1.82
SPT6YGR116W NDI1P32340 513 aa3.68□□□□□ -1.82
SPT6YGR116W STB6P36085 766 aa3.68□□□□□ -1.82
SPT6YGR116W ANR2P36090 516 aaPredicted RBP3.68□□□□□ -1.82
SPT6YGR116W SKG1P36169 355 aa3.68□□□□□ -1.82
SPT6YGR116W YBR225WP38321 900 aa3.68□□□□□ -1.82
SPT6YGR116W AVT2P39981 480 aa3.68□□□□□ -1.82
SPT6YGR116W MPS3P47069 682 aa3.68□□□□□ -1.82
SPT6YGR116W UPF3P48412 387 aaKnown RBP3.68□□□□□ -1.82
SPT6YGR116W APC4Q04601 652 aa3.68□□□□□ -1.82
SPT6YGR116W CDC123Q05791 360 aa3.68□□□□□ -1.82
SPT6YGR116W ECM38Q05902 660 aaPredicted RBP3.68□□□□□ -1.82
SPT6YGR116W ATG20Q07528 640 aa3.68□□□□□ -1.82
SPT6YGR116W PBS2P08018 668 aa3.67□□□□□ -1.82
SPT6YGR116W SPE1P08432 466 aa3.67□□□□□ -1.82
SPT6YGR116W ESS1P22696 170 aa3.67□□□□□ -1.82
SPT6YGR116W YSP3P25036 478 aa3.67□□□□□ -1.82
SPT6YGR116W HEM12P32347 362 aaPredicted RBP3.67□□□□□ -1.82
SPT6YGR116W IST2P38250 946 aa3.67□□□□□ -1.82
SPT6YGR116W ATG12P38316 186 aa3.67□□□□□ -1.82
SPT6YGR116W YHI9P38765 294 aa3.67□□□□□ -1.82
SPT6YGR116W YHR219WP38900 624 aa3.67□□□□□ -1.82
SPT6YGR116W ERP2P39704 215 aa3.67□□□□□ -1.82
SPT6YGR116W BOL3P39724 118 aa3.67□□□□□ -1.82
SPT6YGR116W COS4P43542 379 aa3.67□□□□□ -1.82
SPT6YGR116W DIA3P52290 468 aa3.67□□□□□ -1.82
SPT6YGR116W SNU56Q03782 492 aaKnown RBP3.67□□□□□ -1.82
SPT6YGR116W TRM12Q04235 462 aa3.67□□□□□ -1.82
SPT6YGR116W BCH1Q05029 724 aa3.67□□□□□ -1.82
SPT6YGR116W FAR10Q06001 478 aa3.67□□□□□ -1.82
SPT6YGR116W YDL121CQ07541 149 aa3.67□□□□□ -1.82
SPT6YGR116W FEX1Q08913 375 aa3.67□□□□□ -1.82
SPT6YGR116W NCR1Q12200 1170 aa3.67□□□□□ -1.82
SPT6YGR116W COS2P0CX12 379 aa3.67□□□□□ -1.82
SPT6YGR116W COS3P0CX13 379 aa3.67□□□□□ -1.82
SPT6YGR116W YPK1P12688 680 aaKnown RBP3.67□□□□□ -1.82
SPT6YGR116W RME1P32338 300 aaKnown RBP3.67□□□□□ -1.82
SPT6YGR116W ECM13P38195 257 aa3.67□□□□□ -1.82
SPT6YGR116W SRP72P38688 640 aaKnown RBP3.67□□□□□ -1.82
SPT6YGR116W QNS1P38795 714 aaKnown RBP3.67□□□□□ -1.82
SPT6YGR116W FIR1P40020 876 aa3.67□□□□□ -1.82
SPT6YGR116W ALY2P47029 1046 aa3.67□□□□□ -1.82
SPT6YGR116W LSM3P57743 89 aaKnown RBP3.67□□□□□ -1.82
SPT6YGR116W GLO2Q05584 274 aa3.67□□□□□ -1.82
SPT6YGR116W YDL073WQ07454 984 aa3.67□□□□□ -1.82
SPT6YGR116W COS7Q07788 383 aa3.67□□□□□ -1.82
SPT6YGR116W THI21Q08975 551 aa3.67□□□□□ -1.82
SPT6YGR116W CFT2Q12102 859 aaPredicted RBP3.67□□□□□ -1.82
SPT6YGR116W TRM10Q12400 293 aa3.67□□□□□ -1.82
SPT6YGR116W FRT1Q99332 602 aa3.67□□□□□ -1.82
SPT6YGR116W PUT2P07275 575 aa3.67□□□□□ -1.82
SPT6YGR116W CBS2P14905 389 aa3.67□□□□□ -1.82
SPT6YGR116W MET16P18408 261 aaPredicted RBP3.67□□□□□ -1.82
SPT6YGR116W CDC42P19073 191 aa3.67□□□□□ -1.82
SPT6YGR116W GIT1P25346 518 aa3.67□□□□□ -1.82
SPT6YGR116W YCL068CP25593 260 aa3.67□□□□□ -1.82
SPT6YGR116W ASK1P35734 292 aa3.67□□□□□ -1.82
SPT6YGR116W MRPL40P36534 297 aa3.67□□□□□ -1.82
SPT6YGR116W TPA1P40032 644 aaKnown RBP3.67□□□□□ -1.82
SPT6YGR116W ECM9Q02202 377 aa3.67□□□□□ -1.82
SPT6YGR116W DOT1Q04089 582 aaKnown RBP3.67□□□□□ -1.82
SPT6YGR116W OPT2Q06593 877 aa3.67□□□□□ -1.82
SPT6YGR116W ENT4Q07872 247 aa3.67□□□□□ -1.82
SPT6YGR116W ESA1Q08649 445 aa3.67□□□□□ -1.82
SPT6YGR116W FEX2Q08991 375 aa3.67□□□□□ -1.82
SPT6YGR116W ERG12P07277 443 aa3.67□□□□□ -1.82
SPT6YGR116W ERR1P0CX10 437 aa3.67□□□□□ -1.82
SPT6YGR116W ERR2P0CX11 437 aa3.67□□□□□ -1.82
SPT6YGR116W DIT1P21623 536 aa3.67□□□□□ -1.82
SPT6YGR116W RAM1P22007 431 aa3.67□□□□□ -1.82
SPT6YGR116W CHA1P25379 360 aaKnown RBP3.67□□□□□ -1.82
SPT6YGR116W PHO91P27514 894 aa3.67□□□□□ -1.82
SPT6YGR116W YHR182WP38870 785 aa3.67□□□□□ -1.82
SPT6YGR116W GDH3P39708 457 aa3.67□□□□□ -1.82
SPT6YGR116W ERR3P42222 437 aa3.67□□□□□ -1.82
SPT6YGR116W MNN11P46985 422 aaKnown RBP3.67□□□□□ -1.82
SPT6YGR116W CGR1P53188 120 aa3.67□□□□□ -1.82
SPT6YGR116W NQM1P53228 333 aaPredicted RBP3.67□□□□□ -1.82
SPT6YGR116W YMR155WQ03795 547 aa3.67□□□□□ -1.82
SPT6YGR116W HDA3Q06623 655 aa3.67□□□□□ -1.82
SPT6YGR116W SUB2Q07478 446 aaKnown RBP3.67□□□□□ -1.82
SPT6YGR116W YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
SPT6YGR116W YOR214CQ12282 236 aa3.67□□□□□ -1.82
SPT6YGR116W NSP1P14907 823 aaKnown RBP3.66□□□□□ -1.82
SPT6YGR116W PPZ1P26570 692 aa3.66□□□□□ -1.82
SPT6YGR116W COX13P32799 129 aa3.66□□□□□ -1.82
SPT6YGR116W YBL086CP38177 466 aa3.66□□□□□ -1.82
SPT6YGR116W YBL029WP38201 376 aa3.66□□□□□ -1.82
SPT6YGR116W LSM12P38828 187 aaKnown RBP3.66□□□□□ -1.82
SPT6YGR116W YEN1P40028 759 aa3.66□□□□□ -1.82
SPT6YGR116W LSM1P47017 172 aaKnown RBP3.66□□□□□ -1.82
SPT6YGR116W APS3P47064 194 aa3.66□□□□□ -1.82
SPT6YGR116W HOC1P47124 396 aa3.66□□□□□ -1.82
SPT6YGR116W ALT2P52892 507 aa3.66□□□□□ -1.82
SPT6YGR116W CUL3P53202 744 aa3.66□□□□□ -1.82
SPT6YGR116W CLD1P53264 445 aa3.66□□□□□ -1.82
SPT6YGR116W RTT102P53330 157 aa3.66□□□□□ -1.82
SPT6YGR116W YNR068CP53754 272 aa3.66□□□□□ -1.82
SPT6YGR116W UAF30Q08747 228 aa3.66□□□□□ -1.82
SPT6YGR116W COX4P04037 155 aa3.66□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms