RNA–Protein interactions for RNA: YFR004W

RPN11, Transcript of Metalloprotease subunit of 19S regulatory particle, yeastyeast

Gene RPN11, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN11YFR004W MON1P53129 644 aa6.08□□□□□ -1.44
RPN11YFR004W SLU7Q02775 382 aaKnown RBP6.08□□□□□ -1.44
RPN11YFR004W ADY3Q07732 790 aa6.08□□□□□ -1.44
RPN11YFR004W NBP2Q12163 236 aa6.08□□□□□ -1.44
RPN11YFR004W GPM3Q12326 303 aa6.08□□□□□ -1.44
RPN11YFR004W IZH4Q99393 312 aa6.08□□□□□ -1.44
RPN11YFR004W GCD2P12754 651 aaPredicted RBP6.07□□□□□ -1.44
RPN11YFR004W SPS22P25380 463 aa6.07□□□□□ -1.44
RPN11YFR004W SEC6P32844 805 aa6.07□□□□□ -1.44
RPN11YFR004W CYM1P32898 989 aa6.07□□□□□ -1.44
RPN11YFR004W KES1P35844 434 aaKnown RBP6.07□□□□□ -1.44
RPN11YFR004W SRX1P36077 127 aa6.07□□□□□ -1.44
RPN11YFR004W YBR184WP38299 523 aa6.07□□□□□ -1.44
RPN11YFR004W WSC4P38739 605 aa6.07□□□□□ -1.44
RPN11YFR004W RIX1P38883 763 aaPredicted RBP6.07□□□□□ -1.44
RPN11YFR004W ERP2P39704 215 aa6.07□□□□□ -1.44
RPN11YFR004W DLD3P39976 496 aaKnown RBP6.07□□□□□ -1.44
RPN11YFR004W MGS1P40151 587 aa6.07□□□□□ -1.44
RPN11YFR004W PEP8P40335 379 aa6.07□□□□□ -1.44
RPN11YFR004W RRT5P43607 289 aa6.07□□□□□ -1.44
RPN11YFR004W PFD1P46988 109 aa6.07□□□□□ -1.44
RPN11YFR004W YGR127WP53275 312 aa6.07□□□□□ -1.44
RPN11YFR004W LSC1P53598 329 aaKnown RBP6.07□□□□□ -1.44
RPN11YFR004W MTD1Q02046 320 aaKnown RBP6.07□□□□□ -1.44
RPN11YFR004W OSH6Q02201 448 aa6.07□□□□□ -1.44
RPN11YFR004W HEL2Q05580 639 aaKnown RBP6.07□□□□□ -1.44
RPN11YFR004W YLR346CQ06139 101 aa6.07□□□□□ -1.44
RPN11YFR004W EMG1Q06287 252 aaKnown RBP6.07□□□□□ -1.44
RPN11YFR004W OPT2Q06593 877 aa6.07□□□□□ -1.44
RPN11YFR004W THI20Q08224 551 aa6.07□□□□□ -1.44
RPN11YFR004W CUE5Q08412 411 aaKnown RBP6.07□□□□□ -1.44
RPN11YFR004W DIA2Q08496 732 aaPredicted RBP6.07□□□□□ -1.44
RPN11YFR004W SLP1Q12232 587 aa6.07□□□□□ -1.44
RPN11YFR004W LPX1Q12405 387 aaKnown RBP6.07□□□□□ -1.44
RPN11YFR004W AI5_ALPHAQ9ZZX1 630 aa6.07□□□□□ -1.44
RPN11YFR004W MSF1P08425 469 aa6.06□□□□□ -1.44
RPN11YFR004W EXO70P19658 623 aa6.06□□□□□ -1.44
RPN11YFR004W SEC14P24280 304 aaKnown RBP6.06□□□□□ -1.44
RPN11YFR004W GID7P25569 745 aa6.06□□□□□ -1.44
RPN11YFR004W BUD14P27637 709 aa6.06□□□□□ -1.44
RPN11YFR004W URA10P30402 227 aa6.06□□□□□ -1.44
RPN11YFR004W MET22P32179 357 aa6.06□□□□□ -1.44
RPN11YFR004W THI4P32318 326 aa6.06□□□□□ -1.44
RPN11YFR004W YME2P32843 850 aa6.06□□□□□ -1.44
RPN11YFR004W AIM26P32858 118 aa6.06□□□□□ -1.44
RPN11YFR004W HSP78P33416 811 aa6.06□□□□□ -1.44
RPN11YFR004W PHO89P38361 574 aa6.06□□□□□ -1.44
RPN11YFR004W SIC1P38634 284 aa6.06□□□□□ -1.44
RPN11YFR004W TRM5P38793 499 aa6.06□□□□□ -1.44
RPN11YFR004W BAT1P38891 393 aaKnown RBP6.06□□□□□ -1.44
RPN11YFR004W LYS9P38999 446 aa6.06□□□□□ -1.44
RPN11YFR004W YEN1P40028 759 aa6.06□□□□□ -1.44
RPN11YFR004W ALG5P40350 334 aa6.06□□□□□ -1.44
RPN11YFR004W PRK1P40494 810 aa6.06□□□□□ -1.44
RPN11YFR004W YIL001WP40560 513 aa6.06□□□□□ -1.44
RPN11YFR004W MAD3P47074 515 aa6.06□□□□□ -1.44
RPN11YFR004W PRP3Q03338 469 aaPredicted RBP6.06□□□□□ -1.44
RPN11YFR004W YMR209CQ03648 457 aa6.06□□□□□ -1.44
RPN11YFR004W YDR444WQ04093 687 aa6.06□□□□□ -1.44
RPN11YFR004W HFD1Q04458 532 aa6.06□□□□□ -1.44
RPN11YFR004W TPO1Q07824 586 aa6.06□□□□□ -1.44
RPN11YFR004W GPN2Q08726 347 aaPredicted RBP6.06□□□□□ -1.44
RPN11YFR004W NOT5Q12514 560 aaPredicted RBP6.06□□□□□ -1.44
RPN11YFR004W GPA2P10823 449 aa6.05□□□□□ -1.44
RPN11YFR004W CLB4P24871 460 aa6.05□□□□□ -1.44
RPN11YFR004W AGP1P25376 633 aa6.05□□□□□ -1.44
RPN11YFR004W RAD14P28519 371 aa6.05□□□□□ -1.44
RPN11YFR004W CCR4P31384 837 aaKnown RBP6.05□□□□□ -1.44
RPN11YFR004W SIN4P32259 974 aa6.05□□□□□ -1.44
RPN11YFR004W DGR2P32330 852 aa6.05□□□□□ -1.44
RPN11YFR004W ECM13P38195 257 aa6.05□□□□□ -1.44
RPN11YFR004W OTU2P38747 307 aaKnown RBP6.05□□□□□ -1.44
RPN11YFR004W DUN1P39009 513 aa6.05□□□□□ -1.44
RPN11YFR004W SSP120P39931 234 aaKnown RBP6.05□□□□□ -1.44
RPN11YFR004W RFX1P48743 811 aa6.05□□□□□ -1.44
RPN11YFR004W FLC3P53121 802 aa6.05□□□□□ -1.44
RPN11YFR004W MRM2P53123 320 aa6.05□□□□□ -1.44
RPN11YFR004W COQ6P53318 479 aa6.05□□□□□ -1.44
RPN11YFR004W HXT15P54854 567 aa6.05□□□□□ -1.44
RPN11YFR004W SLT2Q00772 484 aa6.05□□□□□ -1.44
RPN11YFR004W SMA1Q02651 245 aa6.05□□□□□ -1.44
RPN11YFR004W YDR476CQ03362 224 aa6.05□□□□□ -1.44
RPN11YFR004W ACL4Q03771 387 aa6.05□□□□□ -1.44
RPN11YFR004W FMN1Q03778 218 aa6.05□□□□□ -1.44
RPN11YFR004W YOR387CQ08910 206 aa6.05□□□□□ -1.44
RPN11YFR004W TMA46Q12000 345 aaKnown RBP6.05□□□□□ -1.44
RPN11YFR004W APC9Q12107 265 aa6.05□□□□□ -1.44
RPN11YFR004W LCB4Q12246 624 aa6.05□□□□□ -1.44
RPN11YFR004W OCA6Q12454 224 aa6.05□□□□□ -1.44
RPN11YFR004W PRP8P33334 2413 aaKnown RBP6.05□□□□□ -1.44
RPN11YFR004W PAB1P04147 577 aaKnown RBP RIP-Chip data6.04□□□□□ -1.44not detected
RPN11YFR004W HEM13P11353 328 aaKnown RBP6.04□□□□□ -1.44
RPN11YFR004W YPK1P12688 680 aaKnown RBP6.04□□□□□ -1.44
RPN11YFR004W VPS34P22543 875 aa6.04□□□□□ -1.44
RPN11YFR004W GFD2P25370 566 aaKnown RBP6.04□□□□□ -1.44
RPN11YFR004W PYC2P32327 1180 aaKnown RBP6.04□□□□□ -1.44
RPN11YFR004W NUP120P35729 1037 aa6.04□□□□□ -1.44
RPN11YFR004W LEU5P38702 357 aa6.04□□□□□ -1.44
RPN11YFR004W AIM46P38885 310 aa6.04□□□□□ -1.44
RPN11YFR004W SHU2P38957 223 aa6.04□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms