RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W MDH1P17505 334 aaKnown RBP RIP-Chip data5.25□□□□□ -1.57not detected
UBC6YER100W CPR2P23285 205 aa5.25□□□□□ -1.57
UBC6YER100W PRD1P25375 712 aa5.25□□□□□ -1.57
UBC6YER100W HRR25P29295 494 aaKnown RBP5.25□□□□□ -1.57
UBC6YER100W SSE2P32590 693 aaKnown RBP5.25□□□□□ -1.57
UBC6YER100W WBP1P33767 430 aaKnown RBP5.25□□□□□ -1.57
UBC6YER100W THI80P35202 319 aa5.25□□□□□ -1.57
UBC6YER100W GMH1P36125 273 aa5.25□□□□□ -1.57
UBC6YER100W MRX1P40050 688 aa5.25□□□□□ -1.57
UBC6YER100W NDC80P40460 691 aa5.25□□□□□ -1.57
UBC6YER100W PET130P47065 347 aa5.25□□□□□ -1.57
UBC6YER100W ART5P53244 586 aaKnown RBP5.25□□□□□ -1.57
UBC6YER100W COQ6P53318 479 aa5.25□□□□□ -1.57
UBC6YER100W BNI5P53890 448 aaKnown RBP5.25□□□□□ -1.57
UBC6YER100W EFM6P53970 246 aa5.25□□□□□ -1.57
UBC6YER100W RPA49Q01080 415 aaPredicted RBP5.25□□□□□ -1.57
UBC6YER100W UBP16Q02863 499 aa5.25□□□□□ -1.57
UBC6YER100W PEX25Q02969 394 aa5.25□□□□□ -1.57
UBC6YER100W RSM28Q03430 361 aa5.25□□□□□ -1.57
UBC6YER100W YDR109CQ04585 715 aa5.25□□□□□ -1.57
UBC6YER100W ARG7Q04728 441 aa5.25□□□□□ -1.57
UBC6YER100W YLR040CQ07988 224 aa5.25□□□□□ -1.57
UBC6YER100W MRN1Q08925 612 aaKnown RBP RIP-Chip data5.25□□□□□ -1.57not detected
UBC6YER100W NTO1Q12311 748 aa5.25□□□□□ -1.57
UBC6YER100W SKS1Q12505 502 aa5.25□□□□□ -1.57
UBC6YER100W SEC39Q12745 709 aa5.25□□□□□ -1.57
UBC6YER100W ISN1Q99312 450 aa5.25□□□□□ -1.57
UBC6YER100W LAM4P38800 1345 aa5.24□□□□□ -1.57
UBC6YER100W HXK2P04807 486 aaKnown RBP5.24□□□□□ -1.57
UBC6YER100W STE12P13574 688 aa5.24□□□□□ -1.57
UBC6YER100W PAP1P29468 568 aaKnown RBP5.24□□□□□ -1.57
UBC6YER100W DPH2P32461 534 aa5.24□□□□□ -1.57
UBC6YER100W RPN2P32565 945 aaKnown RBP5.24□□□□□ -1.57
UBC6YER100W TCD2P36101 447 aaKnown RBP5.24□□□□□ -1.57
UBC6YER100W APE3P37302 537 aaKnown RBP5.24□□□□□ -1.57
UBC6YER100W VBA2P38358 474 aaKnown RBP5.24□□□□□ -1.57
UBC6YER100W PKP1P40530 394 aa5.24□□□□□ -1.57
UBC6YER100W DOT5P40553 215 aa5.24□□□□□ -1.57
UBC6YER100W SGN1P40561 250 aaKnown RBP RIP-Chip data5.24□□□□□ -1.57not detected
UBC6YER100W VMA13P41807 478 aaKnown RBP5.24□□□□□ -1.57
UBC6YER100W PMT6P42934 759 aa5.24□□□□□ -1.57
UBC6YER100W FAR3P46671 204 aa5.24□□□□□ -1.57
UBC6YER100W DLD2P46681 530 aaKnown RBP5.24□□□□□ -1.57
UBC6YER100W CTR1P49573 406 aa5.24□□□□□ -1.57
UBC6YER100W COG2P53271 262 aa5.24□□□□□ -1.57
UBC6YER100W ADE16P54113 591 aaKnown RBP5.24□□□□□ -1.57
UBC6YER100W MAK10Q02197 733 aa5.24□□□□□ -1.57
UBC6YER100W OAZ1Q02803 292 aa5.24□□□□□ -1.57
UBC6YER100W TRS23Q03784 219 aa5.24□□□□□ -1.57
UBC6YER100W YDR286CQ05530 114 aa5.24□□□□□ -1.57
UBC6YER100W VTA1Q06263 330 aa5.24□□□□□ -1.57
UBC6YER100W ETT1Q08421 412 aaKnown RBP5.24□□□□□ -1.57
UBC6YER100W GAL80P04387 435 aa5.23□□□□□ -1.57
UBC6YER100W SNT1P25357 1226 aa5.23□□□□□ -1.57
UBC6YER100W BUD14P27637 709 aa5.23□□□□□ -1.57
UBC6YER100W SOF1P33750 489 aaKnown RBP5.23□□□□□ -1.57
UBC6YER100W SEF1P34228 1148 aa5.23□□□□□ -1.57
UBC6YER100W SNU114P36048 1008 aaKnown RBP5.23□□□□□ -1.57
UBC6YER100W PPS1P38148 807 aa5.23□□□□□ -1.57
UBC6YER100W RFC1P38630 861 aaKnown RBP5.23□□□□□ -1.57
UBC6YER100W ECM10P39987 644 aa5.23□□□□□ -1.57
UBC6YER100W ASG1P40467 964 aa5.23□□□□□ -1.57
UBC6YER100W HXT14P42833 540 aa5.23□□□□□ -1.57
UBC6YER100W DPB11P47027 764 aaPredicted RBP5.23□□□□□ -1.57
UBC6YER100W YJL055WP47044 245 aa5.23□□□□□ -1.57
UBC6YER100W APT1P49435 187 aaKnown RBP5.23□□□□□ -1.57
UBC6YER100W DIA3P52290 468 aa5.23□□□□□ -1.57
UBC6YER100W YDR239CQ03780 787 aa5.23□□□□□ -1.57
UBC6YER100W SMF3Q12078 473 aaPredicted RBP5.23□□□□□ -1.57
UBC6YER100W ZPS1Q12512 249 aa5.23□□□□□ -1.57
UBC6YER100W DAL5P15365 543 aa5.22□□□□□ -1.57
UBC6YER100W VMA2P16140 517 aaKnown RBP5.22□□□□□ -1.57
UBC6YER100W PDA1P16387 420 aaKnown RBP5.22□□□□□ -1.57
UBC6YER100W RNR3P21672 869 aaKnown RBP5.22□□□□□ -1.57
UBC6YER100W GDA1P32621 518 aa5.22□□□□□ -1.57
UBC6YER100W TIF3P34167 436 aaKnown RBP5.22□□□□□ -1.57
UBC6YER100W LHS1P36016 881 aa5.22□□□□□ -1.57
UBC6YER100W MTG2P38860 518 aa5.22□□□□□ -1.57
UBC6YER100W BDH2P39713 417 aa5.22□□□□□ -1.57
UBC6YER100W BUR6P40096 142 aa5.22□□□□□ -1.57
UBC6YER100W ZIM17P42844 174 aa5.22□□□□□ -1.57
UBC6YER100W TCB2P48231 1178 aa5.22□□□□□ -1.57
UBC6YER100W PHO23P50947 330 aa5.22□□□□□ -1.57
UBC6YER100W KAP120Q02932 1032 aa5.22□□□□□ -1.57
UBC6YER100W ARX1Q03862 593 aaKnown RBP5.22□□□□□ -1.57
UBC6YER100W SOV1Q04748 898 aa5.22□□□□□ -1.57
UBC6YER100W ROY1Q04847 553 aa5.22□□□□□ -1.57
UBC6YER100W ATG9Q12142 997 aa5.22□□□□□ -1.57
UBC6YER100W INP53Q12271 1107 aa5.22□□□□□ -1.57
UBC6YER100W HCM1P25364 564 aa5.21□□□□□ -1.58
UBC6YER100W PUP3P25451 205 aaKnown RBP5.21□□□□□ -1.58
UBC6YER100W AAD3P25612 363 aa5.21□□□□□ -1.58
UBC6YER100W MGM1P32266 881 aa5.21□□□□□ -1.58
UBC6YER100W PMT1P33775 817 aa5.21□□□□□ -1.58
UBC6YER100W YBR144CP34215 104 aa5.21□□□□□ -1.58
UBC6YER100W SWH1P35845 1188 aa5.21□□□□□ -1.58
UBC6YER100W GLG1P36143 616 aa5.21□□□□□ -1.58
UBC6YER100W YHL017WP38745 532 aa5.21□□□□□ -1.58
UBC6YER100W GIP4P39732 760 aa5.21□□□□□ -1.58
UBC6YER100W ALG5P40350 334 aa5.21□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms