RNA–Protein interactions for RNA: YDL058W

USO1, Transcript of Essential protein involved in vesicle-mediated ER to Golgi transport, yeastyeast

Gene USO1, Length 5,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USO1YDL058W MSS2P40990 351 aa2.05□□□□□ -2.08
USO1YDL058W IME4P41833 600 aa2.05□□□□□ -2.08
USO1YDL058W PSA1P41940 361 aaKnown RBP2.05□□□□□ -2.08
USO1YDL058W ECM27P47144 725 aa2.05□□□□□ -2.08
USO1YDL058W YGL036WP53185 909 aaPredicted RBP2.05□□□□□ -2.08
USO1YDL058W YGR042WP53227 271 aa2.05□□□□□ -2.08
USO1YDL058W SMA1Q02651 245 aa2.05□□□□□ -2.08
USO1YDL058W RMI1Q02685 241 aa2.05□□□□□ -2.08
USO1YDL058W EAR1Q03212 550 aa2.05□□□□□ -2.08
USO1YDL058W GIM5Q04493 163 aa2.05□□□□□ -2.08
USO1YDL058W RRN11Q04712 507 aa2.05□□□□□ -2.08
USO1YDL058W BRX1Q08235 291 aaKnown RBP2.05□□□□□ -2.08
USO1YDL058W FRE5Q08908 694 aa2.05□□□□□ -2.08
USO1YDL058W RPL7BQ12213 244 aaKnown RBP2.05□□□□□ -2.08
USO1YDL058W YOL087CQ99247 1116 aa2.05□□□□□ -2.08
USO1YDL058W MF(ALPHA)1P01149 165 aa2.05□□□□□ -2.08
USO1YDL058W CAN1P04817 590 aa2.05□□□□□ -2.08
USO1YDL058W HOP09932 586 aa2.05□□□□□ -2.08
USO1YDL058W HVG1P0CE11 249 aa2.05□□□□□ -2.08
USO1YDL058W IMA3P0CW40 589 aa2.05□□□□□ -2.08
USO1YDL058W IMA4P0CW41 589 aa2.05□□□□□ -2.08
USO1YDL058W RAP1P11938 827 aa2.05□□□□□ -2.08
USO1YDL058W TAL1P15019 335 aaKnown RBP2.05□□□□□ -2.08
USO1YDL058W SRP54P20424 541 aaKnown RBP2.05□□□□□ -2.08
USO1YDL058W CMK2P22517 447 aa2.05□□□□□ -2.08
USO1YDL058W ROX1P25042 368 aa2.05□□□□□ -2.08
USO1YDL058W BUD5P25300 642 aaPredicted RBP2.05□□□□□ -2.08
USO1YDL058W PHO91P27514 894 aa2.05□□□□□ -2.08
USO1YDL058W MLF3P32047 452 aa2.05□□□□□ -2.08
USO1YDL058W PYC2P32327 1180 aaKnown RBP2.05□□□□□ -2.08
USO1YDL058W RTG1P32607 177 aa2.05□□□□□ -2.08
USO1YDL058W SLC1P33333 303 aa2.05□□□□□ -2.08
USO1YDL058W NNK1P36003 928 aa2.05□□□□□ -2.08
USO1YDL058W PCS60P38137 543 aaKnown RBP RIP-Chip data2.05□□□□□ -2.08not detected
USO1YDL058W YBR284WP38150 797 aa2.05□□□□□ -2.08
USO1YDL058W YBR259WP38338 688 aa2.05□□□□□ -2.08
USO1YDL058W HXT6P39003 570 aaKnown RBP2.05□□□□□ -2.08
USO1YDL058W HXT7P39004 570 aa2.05□□□□□ -2.08
USO1YDL058W OAF1P39720 1047 aaPredicted RBP2.05□□□□□ -2.08
USO1YDL058W ISC1P40015 477 aaKnown RBP2.05□□□□□ -2.08
USO1YDL058W MNT3P40549 630 aa2.05□□□□□ -2.08
USO1YDL058W YPS6P40583 537 aa2.05□□□□□ -2.08
USO1YDL058W SNZ3P43545 298 aa2.05□□□□□ -2.08
USO1YDL058W YFL040WP43562 540 aa2.05□□□□□ -2.08
USO1YDL058W IRC8P47046 822 aa2.05□□□□□ -2.08
USO1YDL058W NAS6P50086 228 aa2.05□□□□□ -2.08
USO1YDL058W YBP2P53169 641 aa2.05□□□□□ -2.08
USO1YDL058W BIO5P53744 561 aaKnown RBP2.05□□□□□ -2.08
USO1YDL058W SNZ2P53824 298 aa2.05□□□□□ -2.08
USO1YDL058W APS2Q00381 147 aa2.05□□□□□ -2.08
USO1YDL058W REC102Q02721 264 aa2.05□□□□□ -2.08
USO1YDL058W ATG21Q02887 496 aa2.05□□□□□ -2.08
USO1YDL058W VPS38Q05919 439 aa2.05□□□□□ -2.08
USO1YDL058W ADY4Q05955 493 aa2.05□□□□□ -2.08
USO1YDL058W BER1Q06688 274 aaKnown RBP2.05□□□□□ -2.08
USO1YDL058W IMA2Q08295 589 aa2.05□□□□□ -2.08
USO1YDL058W SIA1Q12212 622 aa2.05□□□□□ -2.08
USO1YDL058W DCP1Q12517 231 aaPredicted RBP2.05□□□□□ -2.08
USO1YDL058W RGS2Q99188 309 aa2.05□□□□□ -2.08
USO1YDL058W YRF1-1P0CX20 1796 aa2.05□□□□□ -2.08
USO1YDL058W YRF1-5P0CX21 1796 aa2.05□□□□□ -2.08
USO1YDL058W YRF1-8P0CX22 1796 aa2.05□□□□□ -2.08
USO1YDL058W YOR093CQ12275 1648 aa2.05□□□□□ -2.08
USO1YDL058W ATP2P00830 511 aaKnown RBP2.05□□□□□ -2.08
USO1YDL058W HTA1P04911 132 aaKnown RBP2.05□□□□□ -2.08
USO1YDL058W HTA2P04912 132 aa2.05□□□□□ -2.08
USO1YDL058W ILV5P06168 395 aaKnown RBP2.05□□□□□ -2.08
USO1YDL058W NHP6BP11633 99 aaKnown RBP2.05□□□□□ -2.08
USO1YDL058W EXO70P19658 623 aa2.05□□□□□ -2.08
USO1YDL058W RPS7AP26786 190 aaKnown RBP2.05□□□□□ -2.08
USO1YDL058W MF(ALPHA)2P32435 120 aa2.05□□□□□ -2.08
USO1YDL058W SRB5P32585 307 aa2.05□□□□□ -2.08
USO1YDL058W SRP102P36057 244 aaPredicted RBP2.05□□□□□ -2.08
USO1YDL058W APM3P38153 483 aa2.05□□□□□ -2.08
USO1YDL058W RCR1P38212 213 aa2.05□□□□□ -2.08
USO1YDL058W DSS1P39112 969 aa2.05□□□□□ -2.08
USO1YDL058W YHB1P39676 399 aaKnown RBP2.05□□□□□ -2.08
USO1YDL058W HXT13P39924 564 aa2.05□□□□□ -2.08
USO1YDL058W SHO1P40073 367 aa2.05□□□□□ -2.08
USO1YDL058W ALG5P40350 334 aa2.05□□□□□ -2.08
USO1YDL058W PAC11P40960 533 aa2.05□□□□□ -2.08
USO1YDL058W LYS14P40971 790 aa2.05□□□□□ -2.08
USO1YDL058W QRI7P43122 407 aa2.05□□□□□ -2.08
USO1YDL058W YJR008WP47085 338 aa2.05□□□□□ -2.08
USO1YDL058W ALT2P52892 507 aa2.05□□□□□ -2.08
USO1YDL058W RMD9P53140 646 aaKnown RBP2.05□□□□□ -2.08
USO1YDL058W HXT17P53631 564 aa2.05□□□□□ -2.08
USO1YDL058W HXT15P54854 567 aa2.05□□□□□ -2.08
USO1YDL058W EFR3Q03653 782 aaKnown RBP2.05□□□□□ -2.08
USO1YDL058W PRP42Q03776 544 aaKnown RBP2.05□□□□□ -2.08
USO1YDL058W YMR315WQ04869 349 aaKnown RBP2.05□□□□□ -2.08
USO1YDL058W RSF1Q05043 376 aa2.05□□□□□ -2.08
USO1YDL058W ARO10Q06408 635 aa2.05□□□□□ -2.08
USO1YDL058W YEH2Q07950 538 aa2.05□□□□□ -2.08
USO1YDL058W THI21Q08975 551 aa2.05□□□□□ -2.08
USO1YDL058W ACM1Q08981 209 aa2.05□□□□□ -2.08
USO1YDL058W CWC2Q12046 339 aaPredicted RBP2.05□□□□□ -2.08
USO1YDL058W FAP7Q12055 197 aaPredicted RBP2.05□□□□□ -2.08
USO1YDL058W REX3Q12090 404 aa2.05□□□□□ -2.08
USO1YDL058W ATP16Q12165 160 aa2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms