RNA–Protein interactions for RNA: YDL042C

SIR2, Transcript of Conserved NAD+ dependent histone deacetylase of the Sirtuin family, yeast

Gene SIR2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR2	YDL042C	YKU80	Q04437	629 aa		6.14	□□□□□ -1.43
SIR2	YDL042C	ORM2	Q06144	216 aa		6.14	□□□□□ -1.43
SIR2	YDL042C	SKG3	Q06315	1026 aa		6.14	□□□□□ -1.43
SIR2	YDL042C	NDJ1	Q12366	352 aa		6.14	□□□□□ -1.43
SIR2	YDL042C	LTE1	P07866	1435 aa		6.13	□□□□□ -1.43
SIR2	YDL042C	VTH1	P40438	1549 aa		6.13	□□□□□ -1.43
SIR2	YDL042C	VTH2	P40890	1549 aa		6.13	□□□□□ -1.43
SIR2	YDL042C	SEM1	O94742	89 aa		6.13	□□□□□ -1.43
SIR2	YDL042C	ILS1	P09436	1072 aa	Known RBP	6.13	□□□□□ -1.43
SIR2	YDL042C	RPL19A	P0CX82	189 aa	Known RBP	6.13	□□□□□ -1.43
SIR2	YDL042C	RPL19B	P0CX83	189 aa	Predicted RBP	6.13	□□□□□ -1.43
SIR2	YDL042C	MSS51	P32335	436 aa		6.13	□□□□□ -1.43
SIR2	YDL042C	ADE17	P38009	592 aa	Known RBP	6.13	□□□□□ -1.43
SIR2	YDL042C	SEC24	P40482	926 aa	Known RBP	6.13	□□□□□ -1.43
SIR2	YDL042C	TAD3	Q9URQ3	322 aa		6.13	□□□□□ -1.43
SIR2	YDL042C	MYO4	P32492	1471 aa		6.13	□□□□□ -1.43
SIR2	YDL042C	HSC82	P15108	705 aa	Known RBP	6.12	□□□□□ -1.43
SIR2	YDL042C	NUP1	P20676	1076 aa		6.12	□□□□□ -1.43
SIR2	YDL042C	URE2	P23202	354 aa	Known RBP	6.12	□□□□□ -1.43
SIR2	YDL042C	IRC7	P43623	340 aa		6.12	□□□□□ -1.43
SIR2	YDL042C	ORC5	P50874	479 aa		6.12	□□□□□ -1.43
SIR2	YDL042C	RIX7	Q07844	837 aa	Known RBP	6.12	□□□□□ -1.43
SIR2	YDL042C	YNL162W-A	Q3E7A8	72 aa		6.12	□□□□□ -1.43
SIR2	YDL042C	APN1	P22936	367 aa		6.11	□□□□□ -1.43
SIR2	YDL042C	HUA2	Q12134	243 aa		6.11	□□□□□ -1.43
SIR2	YDL042C	FRE7	Q12333	620 aa		6.11	□□□□□ -1.43
SIR2	YDL042C	MRP2	P10663	115 aa	Predicted RBP	6.1	□□□□□ -1.43
SIR2	YDL042C	YBL029W	P38201	376 aa		6.1	□□□□□ -1.43
SIR2	YDL042C	RTS1	P38903	757 aa		6.1	□□□□□ -1.43
SIR2	YDL042C	ECM10	P39987	644 aa		6.1	□□□□□ -1.43
SIR2	YDL042C	ATF1	P40353	525 aa		6.1	□□□□□ -1.43
SIR2	YDL042C	CDC1	P40986	491 aa		6.1	□□□□□ -1.43
SIR2	YDL042C	NMD5	P46970	1048 aa		6.1	□□□□□ -1.43
SIR2	YDL042C	YGL036W	P53185	909 aa	Predicted RBP	6.1	□□□□□ -1.43
SIR2	YDL042C	COQ11	Q05892	277 aa		6.1	□□□□□ -1.43
SIR2	YDL042C	YRF1-1	P0CX20	1796 aa		6.1	□□□□□ -1.43
SIR2	YDL042C	YRF1-5	P0CX21	1796 aa		6.1	□□□□□ -1.43
SIR2	YDL042C	YRF1-8	P0CX22	1796 aa		6.1	□□□□□ -1.43
SIR2	YDL042C	NUP159	P40477	1460 aa		6.1	□□□□□ -1.43
SIR2	YDL042C	PET111	P08468	800 aa		6.1	□□□□□ -1.43
SIR2	YDL042C	MBR1	P23493	339 aa		6.1	□□□□□ -1.43
SIR2	YDL042C	JHD1	P40034	492 aa		6.1	□□□□□ -1.43
SIR2	YDL042C	DUO1	P53168	247 aa	Known RBP	6.1	□□□□□ -1.43
SIR2	YDL042C	MED1	Q12321	566 aa		6.1	□□□□□ -1.43
SIR2	YDL042C	BNI1	P41832	1953 aa		6.09	□□□□□ -1.43
SIR2	YDL042C	PGK1	P00560	416 aa	Known RBP	6.09	□□□□□ -1.43
SIR2	YDL042C	SAC6	P32599	642 aa	Known RBP	6.09	□□□□□ -1.43
SIR2	YDL042C	RPN11	P43588	306 aa	Known RBP	6.09	□□□□□ -1.43
SIR2	YDL042C	CTK2	P46962	323 aa		6.09	□□□□□ -1.43
SIR2	YDL042C	TCO89	Q08921	799 aa		6.09	□□□□□ -1.43
SIR2	YDL042C	YBR126W-A	Q8TGU7	68 aa		6.09	□□□□□ -1.43
SIR2	YDL042C	NTE1	Q04958	1679 aa		6.08	□□□□□ -1.44
SIR2	YDL042C	HXK2	P04807	486 aa	Known RBP	6.08	□□□□□ -1.44
SIR2	YDL042C	YCK1	P23291	538 aa		6.08	□□□□□ -1.44
SIR2	YDL042C	YCR006C	P25350	157 aa		6.08	□□□□□ -1.44
SIR2	YDL042C	SNT2	P53127	1403 aa		6.08	□□□□□ -1.44
SIR2	YDL042C	IST1	P53843	298 aa	Predicted RBP	6.08	□□□□□ -1.44
SIR2	YDL042C	INA17	Q02888	182 aa		6.08	□□□□□ -1.44
SIR2	YDL042C	THI7	Q05998	598 aa		6.08	□□□□□ -1.44
SIR2	YDL042C	YLR049C	Q12110	428 aa		6.08	□□□□□ -1.44
SIR2	YDL042C	RPO21	P04050	1733 aa	Known RBP	6.08	□□□□□ -1.44
SIR2	YDL042C	NOP4	P37838	685 aa	Known RBP	6.07	□□□□□ -1.44
SIR2	YDL042C	SNO3	P43544	222 aa		6.07	□□□□□ -1.44
SIR2	YDL042C	LGE1	Q02796	332 aa	Known RBP	6.07	□□□□□ -1.44
SIR2	YDL042C	PDR8	Q06149	701 aa		6.07	□□□□□ -1.44
SIR2	YDL042C	IMH1	Q06704	911 aa	Known RBP	6.07	□□□□□ -1.44
SIR2	YDL042C	SNQ2	P32568	1501 aa	Known RBP	6.07	□□□□□ -1.44
SIR2	YDL042C	OCT1	P35999	772 aa		6.07	□□□□□ -1.44
SIR2	YDL042C	ARN1	P38731	627 aa		6.07	□□□□□ -1.44
SIR2	YDL042C	YJL107C	P42947	387 aa		6.07	□□□□□ -1.44
SIR2	YDL042C	YFR020W	P43600	232 aa		6.07	□□□□□ -1.44
SIR2	YDL042C	IDP3	P53982	420 aa	Known RBP	6.07	□□□□□ -1.44
SIR2	YDL042C	SEG1	Q04279	960 aa		6.07	□□□□□ -1.44
SIR2	YDL042C	YLR455W	Q06188	304 aa		6.07	□□□□□ -1.44
SIR2	YDL042C	PSR1	Q07800	427 aa		6.07	□□□□□ -1.44
SIR2	YDL042C	GET3	Q12154	354 aa	Known RBP	6.07	□□□□□ -1.44
SIR2	YDL042C	MAL33	P38157	468 aa		6.06	□□□□□ -1.44
SIR2	YDL042C	YNG2	P38806	282 aa	Known RBP	6.06	□□□□□ -1.44
SIR2	YDL042C	BUR6	P40096	142 aa		6.06	□□□□□ -1.44
SIR2	YDL042C	SEC53	P07283	254 aa	Known RBP	6.05	□□□□□ -1.44
SIR2	YDL042C	YMR085W	P0CF18	432 aa		6.05	□□□□□ -1.44
SIR2	YDL042C	PDB1	P32473	366 aa	Known RBP	6.05	□□□□□ -1.44
SIR2	YDL042C	AUR1	P36107	401 aa	Predicted RBP	6.05	□□□□□ -1.44
SIR2	YDL042C	DPB11	P47027	764 aa	Predicted RBP	6.05	□□□□□ -1.44
SIR2	YDL042C	RSC9	Q03124	581 aa		6.05	□□□□□ -1.44
SIR2	YDL042C	PFA5	Q03289	374 aa		6.05	□□□□□ -1.44
SIR2	YDL042C	MCH4	Q08268	501 aa		6.05	□□□□□ -1.44
SIR2	YDL042C	PFA4	Q12006	378 aa		6.05	□□□□□ -1.44
SIR2	YDL042C	VPS15	P22219	1454 aa		6.05	□□□□□ -1.44
SIR2	YDL042C	GEA2	P39993	1459 aa	Known RBP	6.05	□□□□□ -1.44
SIR2	YDL042C	COQ3	P27680	312 aa		6.04	□□□□□ -1.44
SIR2	YDL042C	NDE1	P40215	560 aa		6.04	□□□□□ -1.44
SIR2	YDL042C	RIM13	Q03792	727 aa		6.04	□□□□□ -1.44
SIR2	YDL042C	SDH5	Q08230	162 aa		6.04	□□□□□ -1.44
SIR2	YDL042C	NOP58	Q12499	511 aa	Known RBP	6.04	□□□□□ -1.44
SIR2	YDL042C	RTP1	Q12751	981 aa		6.04	□□□□□ -1.44
SIR2	YDL042C	YER145C-A	A0A023PYF4	145 aa		6.04	□□□□□ -1.44
SIR2	YDL042C	CHO1	P08456	276 aa		6.04	□□□□□ -1.44
SIR2	YDL042C	GPA1	P08539	472 aa		6.04	□□□□□ -1.44
SIR2	YDL042C	MET8	P15807	274 aa		6.04	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms