RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 CACNB2Q08289 660 aaPredicted RBP29.99■■■□□ 2.39
VEGFA-232ENST00000640653 FAM83BQ5T0W9 1011 aa29.99■■■□□ 2.39
VEGFA-232ENST00000640653 ANKLE1Q8NAG6 615 aa29.99■■■□□ 2.39
VEGFA-232ENST00000640653 MROH8Q9H579 483 aa29.99■■■□□ 2.39
VEGFA-232ENST00000640653 MFSD14CQ5VZR4 134 aa29.98■■■□□ 2.39
VEGFA-232ENST00000640653 CEP95Q96GE4 821 aa29.98■■■□□ 2.39
VEGFA-232ENST00000640653 FBXO28Q9NVF7 368 aa29.98■■■□□ 2.39
VEGFA-232ENST00000640653 PPP1R9AQ9ULJ8 1098 aa29.98■■■□□ 2.39
VEGFA-232ENST00000640653 ADAMTS5Q9UNA0 930 aa29.98■■■□□ 2.39
VEGFA-232ENST00000640653 PLIN4Q96Q06 1357 aa29.98■■■□□ 2.39
VEGFA-232ENST00000640653 F5H6K3 240 aa29.97■■■□□ 2.39
VEGFA-232ENST00000640653 FOXP2O15409 715 aa29.97■■■□□ 2.39
VEGFA-232ENST00000640653 TTLL1O95922 423 aa29.97■■■□□ 2.39
VEGFA-232ENST00000640653 KLRC3Q07444 240 aa29.97■■■□□ 2.39
VEGFA-232ENST00000640653 MCMDC2Q4G0Z9 681 aa29.97■■■□□ 2.39
VEGFA-232ENST00000640653 DPP9Q86TI2 863 aa29.97■■■□□ 2.39
VEGFA-232ENST00000640653 NCAPG2Q86XI2 1143 aa29.97■■■□□ 2.39
VEGFA-232ENST00000640653 NEDD1Q8NHV4 660 aa29.97■■■□□ 2.39
VEGFA-232ENST00000640653 RILPL2Q969X0 211 aa29.97■■■□□ 2.39
VEGFA-232ENST00000640653 MTMR4Q9NYA4 1195 aa29.97■■■□□ 2.39
VEGFA-232ENST00000640653 SYNPO2Q9UMS6 1093 aa29.97■■■□□ 2.39
VEGFA-232ENST00000640653 SLC25A27O95847 323 aa29.96■■■□□ 2.39
VEGFA-232ENST00000640653 NDUFB10O96000 172 aa29.96■■■□□ 2.39
VEGFA-232ENST00000640653 TMEM132BQ14DG7 1078 aa29.96■■■□□ 2.39
VEGFA-232ENST00000640653 MKL1Q969V6 931 aa29.96■■■□□ 2.39
VEGFA-232ENST00000640653 FAM227BQ96M60 508 aa29.96■■■□□ 2.39
VEGFA-232ENST00000640653 OSBPL3Q9H4L5 887 aa29.96■■■□□ 2.39
VEGFA-232ENST00000640653 ADORA2AP29274 412 aa29.95■■■□□ 2.39
VEGFA-232ENST00000640653 TFAP4Q01664 338 aa29.95■■■□□ 2.39
VEGFA-232ENST00000640653 VPS53Q5VIR6 699 aa29.95■■■□□ 2.39
VEGFA-232ENST00000640653 PLEKHM2Q8IWE5 1019 aa29.95■■■□□ 2.39
VEGFA-232ENST00000640653 SLC5A4Q9NY91 659 aa29.95■■■□□ 2.39
VEGFA-232ENST00000640653 PARP14Q460N5 1801 aa29.94■■■□□ 2.38
VEGFA-232ENST00000640653 A0A0D9SFI3 127 aa29.94■■■□□ 2.38
VEGFA-232ENST00000640653 VWA5AO00534 786 aa29.94■■■□□ 2.38
VEGFA-232ENST00000640653 ALX1Q15699 326 aa29.94■■■□□ 2.38
VEGFA-232ENST00000640653 FAM47AQ5JRC9 791 aa29.94■■■□□ 2.38
VEGFA-232ENST00000640653 PPP4R3BQ5MIZ7 849 aa29.94■■■□□ 2.38
VEGFA-232ENST00000640653 NECAB2Q7Z6G3 386 aa29.94■■■□□ 2.38
VEGFA-232ENST00000640653 ABRAQ8N0Z2 381 aa29.94■■■□□ 2.38
VEGFA-232ENST00000640653 NPLOC4Q8TAT6 608 aa29.94■■■□□ 2.38
VEGFA-232ENST00000640653 PAWRQ96IZ0 340 aaKnown RBP29.94■■■□□ 2.38
VEGFA-232ENST00000640653 NUP88Q99567 741 aaPredicted RBP29.94■■■□□ 2.38
VEGFA-232ENST00000640653 SLF1Q9BQI6 1058 aa29.94■■■□□ 2.38
VEGFA-232ENST00000640653 FLRT1Q9NZU1 646 aa29.94■■■□□ 2.38
VEGFA-232ENST00000640653 OGDHLQ9ULD0 1010 aa29.94■■■□□ 2.38
VEGFA-232ENST00000640653 ZNF236Q9UL36 1845 aa29.94■■■□□ 2.38
VEGFA-232ENST00000640653 NMIQ13287 307 aaPredicted RBP29.93■■■□□ 2.38
VEGFA-232ENST00000640653 ANAPC4Q9UJX5 808 aa29.93■■■□□ 2.38
VEGFA-232ENST00000640653 CCND3P30281 292 aaPredicted RBP29.92■■■□□ 2.38
VEGFA-232ENST00000640653 COPB2P35606 906 aa29.92■■■□□ 2.38
VEGFA-232ENST00000640653 CTDSPL2Q05D32 466 aa29.92■■■□□ 2.38
VEGFA-232ENST00000640653 RIOX2Q8IUF8 465 aa29.92■■■□□ 2.38
VEGFA-232ENST00000640653 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.92■■■□□ 2.382e-6■□□□□ 9
VEGFA-232ENST00000640653 TSPY2A6NKD2 308 aa29.91■■■□□ 2.38
VEGFA-232ENST00000640653 H0YGN5 161 aa29.91■■■□□ 2.38
VEGFA-232ENST00000640653 FCER1AP12319 257 aa29.91■■■□□ 2.38
VEGFA-232ENST00000640653 STAT3P40763 770 aa29.91■■■□□ 2.38
VEGFA-232ENST00000640653 LRRC47Q8N1G4 583 aaKnown RBP29.91■■■□□ 2.38
VEGFA-232ENST00000640653 GMCL1P1Q8NEA9 526 aa29.91■■■□□ 2.38
VEGFA-232ENST00000640653 NR2E3Q9Y5X4 410 aa29.91■■■□□ 2.38
VEGFA-232ENST00000640653 OLFML2BQ68BL8 750 aa29.9■■■□□ 2.38
VEGFA-232ENST00000640653 PRPF38AQ8NAV1 312 aaKnown RBP29.9■■■□□ 2.38
VEGFA-232ENST00000640653 REPS2Q8NFH8 660 aa29.9■■■□□ 2.38
VEGFA-232ENST00000640653 DIS3LQ8TF46 1054 aaKnown RBP29.9■■■□□ 2.38
VEGFA-232ENST00000640653 NBPF3Q9H094 633 aa29.9■■■□□ 2.38
VEGFA-232ENST00000640653 MYH4Q9Y623 1939 aa29.89■■■□□ 2.38
VEGFA-232ENST00000640653 MFAP1P55081 439 aaKnown RBP29.89■■■□□ 2.38
VEGFA-232ENST00000640653 FEM1BQ9UK73 627 aa29.89■■■□□ 2.38
VEGFA-232ENST00000640653 ZNF214Q9UL59 606 aaPredicted RBP29.89■■■□□ 2.38
VEGFA-232ENST00000640653 CCDC171Q6TFL3 1326 aa29.89■■■□□ 2.38
VEGFA-232ENST00000640653 COBLO75128 1261 aa29.88■■■□□ 2.37
VEGFA-232ENST00000640653 FGAP02671 866 aa29.88■■■□□ 2.37
VEGFA-232ENST00000640653 HSPD1P10809 573 aaKnown RBP29.88■■■□□ 2.37
VEGFA-232ENST00000640653 SDSP20132 328 aa29.88■■■□□ 2.37
VEGFA-232ENST00000640653 CYP2C19P33261 490 aa29.88■■■□□ 2.37
VEGFA-232ENST00000640653 SLFN13Q68D06 897 aa29.88■■■□□ 2.37
VEGFA-232ENST00000640653 ZNF589Q86UQ0 364 aaPredicted RBP29.88■■■□□ 2.37
VEGFA-232ENST00000640653 MMP19Q99542 508 aa29.88■■■□□ 2.37
VEGFA-232ENST00000640653 CTDP1Q9Y5B0 961 aaPredicted RBP29.88■■■□□ 2.37
VEGFA-232ENST00000640653 ZMYM6O95789 1325 aa29.88■■■□□ 2.37
VEGFA-232ENST00000640653 LHX8Q68G74 356 aa29.87■■■□□ 2.37
VEGFA-232ENST00000640653 TEX13BQ9BXU2 312 aa29.87■■■□□ 2.37
VEGFA-232ENST00000640653 COL11A1P12107 1806 aaPredicted RBP29.87■■■□□ 2.37
VEGFA-232ENST00000640653 ORC4O43929 436 aa29.86■■■□□ 2.37
VEGFA-232ENST00000640653 EVI5O60447 810 aa29.86■■■□□ 2.37
VEGFA-232ENST00000640653 RANBP6O60518 1105 aaKnown RBP29.86■■■□□ 2.37
VEGFA-232ENST00000640653 MSCO60682 206 aa29.86■■■□□ 2.37
VEGFA-232ENST00000640653 ZBED4O75132 1171 aa29.86■■■□□ 2.37
VEGFA-232ENST00000640653 IGHA2P01877 340 aa29.86■■■□□ 2.37
VEGFA-232ENST00000640653 BMP3P12645 472 aa29.86■■■□□ 2.37
VEGFA-232ENST00000640653 CNGA1P29973 690 aa29.86■■■□□ 2.37
VEGFA-232ENST00000640653 KCTD2Q14681 263 aa29.86■■■□□ 2.37
VEGFA-232ENST00000640653 KIFC2Q96AC6 838 aa29.86■■■□□ 2.37
VEGFA-232ENST00000640653 C11orf49Q9H6J7 331 aa29.86■■■□□ 2.37
VEGFA-232ENST00000640653 INCENPQ9NQS7 918 aa29.86■■■□□ 2.37
VEGFA-232ENST00000640653 STX8Q9UNK0 236 aa29.86■■■□□ 2.37
VEGFA-232ENST00000640653 SLC34A2O95436 690 aa29.85■■■□□ 2.37
VEGFA-232ENST00000640653 MNX1P50219 401 aaPredicted RBP29.85■■■□□ 2.37
VEGFA-232ENST00000640653 DDX20Q9UHI6 824 aaKnown RBP29.85■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms