RNA–Protein interactions for RNA: ENST00000640264.1

HNRNPU-227, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 328 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-227ENST00000640264 SEPT2Q15019 361 aa12.69□□□□□ -0.38
HNRNPU-227ENST00000640264 TTC22Q5TAA0 569 aa12.69□□□□□ -0.38
HNRNPU-227ENST00000640264 C1orf53Q5VUE5 145 aa12.69□□□□□ -0.38
HNRNPU-227ENST00000640264 MB21D1Q8N884 522 aa12.69□□□□□ -0.38
HNRNPU-227ENST00000640264 FERMT2Q96AC1 680 aa12.69□□□□□ -0.38
HNRNPU-227ENST00000640264 CCDC8Q9H0W5 538 aaPredicted RBP12.69□□□□□ -0.38
HNRNPU-227ENST00000640264 MROH8Q9H579 483 aa12.69□□□□□ -0.38
HNRNPU-227ENST00000640264 PRDM6Q9NQX0 595 aa12.69□□□□□ -0.38
HNRNPU-227ENST00000640264 PDLIM7Q9NR12 457 aa12.69□□□□□ -0.38
HNRNPU-227ENST00000640264 TLR7Q9NYK1 1049 aaKnown RBP12.69□□□□□ -0.38
HNRNPU-227ENST00000640264 TRIM43BA6NCK2 446 aa12.68□□□□□ -0.38
HNRNPU-227ENST00000640264 COBLO75128 1261 aa12.68□□□□□ -0.38
HNRNPU-227ENST00000640264 HMMRO75330 724 aa12.68□□□□□ -0.38
HNRNPU-227ENST00000640264 GUCY1A2P33402 732 aa12.68□□□□□ -0.38
HNRNPU-227ENST00000640264 PLS1Q14651 629 aa12.68□□□□□ -0.38
HNRNPU-227ENST00000640264 LRRC41Q15345 812 aa12.68□□□□□ -0.38
HNRNPU-227ENST00000640264 PRAMEF19Q5SWL8 479 aa12.68□□□□□ -0.38
HNRNPU-227ENST00000640264 SH3RF1Q7Z6J0 888 aa12.68□□□□□ -0.38
HNRNPU-227ENST00000640264 NCAPG2Q86XI2 1143 aa12.68□□□□□ -0.38
HNRNPU-227ENST00000640264 ERC1Q8IUD2 1116 aa12.68□□□□□ -0.38
HNRNPU-227ENST00000640264 ABRAQ8N0Z2 381 aa12.68□□□□□ -0.38
HNRNPU-227ENST00000640264 TRIM43Q96BQ3 446 aaPredicted RBP12.68□□□□□ -0.38
HNRNPU-227ENST00000640264 KIF2CQ99661 725 aa12.68□□□□□ -0.38
HNRNPU-227ENST00000640264 SLKQ9H2G2 1235 aaPredicted RBP12.68□□□□□ -0.38
HNRNPU-227ENST00000640264 TTYH1Q9H313 450 aaPredicted RBP12.68□□□□□ -0.38
HNRNPU-227ENST00000640264 OSBPL3Q9H4L5 887 aa12.68□□□□□ -0.38
HNRNPU-227ENST00000640264 TACC3Q9Y6A5 838 aa12.68□□□□□ -0.38
HNRNPU-227ENST00000640264 ZNFX1Q9P2E3 1918 aaKnown RBP12.67□□□□□ -0.38
HNRNPU-227ENST00000640264 TMEM265A0A087WTH1 108 aa12.67□□□□□ -0.38
HNRNPU-227ENST00000640264 MAGEB6P1A0A0J9YX57 407 aa12.67□□□□□ -0.38
HNRNPU-227ENST00000640264 A0A1W2PRG0 241 aa12.67□□□□□ -0.38
HNRNPU-227ENST00000640264 FCER1AP12319 257 aa12.67□□□□□ -0.38
HNRNPU-227ENST00000640264 GSPT1P15170 499 aaKnown RBP12.67□□□□□ -0.38
HNRNPU-227ENST00000640264 TLE2Q04725 743 aa12.67□□□□□ -0.38
HNRNPU-227ENST00000640264 EAF2Q96CJ1 260 aaPredicted RBP12.67□□□□□ -0.38
HNRNPU-227ENST00000640264 RNPC3Q96LT9 517 aaKnown RBP12.67□□□□□ -0.38
HNRNPU-227ENST00000640264 NRBP1Q9UHY1 535 aa12.67□□□□□ -0.38
HNRNPU-227ENST00000640264 PHF24Q9UPV7 400 aa12.67□□□□□ -0.38
HNRNPU-227ENST00000640264 EXOC6BQ9Y2D4 811 aa12.67□□□□□ -0.38
HNRNPU-227ENST00000640264 SMCHD1A6NHR9 2005 aa12.66□□□□□ -0.38
HNRNPU-227ENST00000640264 NAV1Q8NEY1 1877 aa12.66□□□□□ -0.38
HNRNPU-227ENST00000640264 FLOT1O75955 427 aa12.66□□□□□ -0.38
HNRNPU-227ENST00000640264 CLTBP09497 229 aa12.66□□□□□ -0.38
HNRNPU-227ENST00000640264 RARBP10826 455 aa12.66□□□□□ -0.38
HNRNPU-227ENST00000640264 DSG3P32926 999 aa12.66□□□□□ -0.38
HNRNPU-227ENST00000640264 GABPAQ06546 454 aa12.66□□□□□ -0.38
HNRNPU-227ENST00000640264 HSP90AB4PQ58FF6 505 aa12.66□□□□□ -0.38
HNRNPU-227ENST00000640264 FAM47AQ5JRC9 791 aa12.66□□□□□ -0.38
HNRNPU-227ENST00000640264 TMEM179Q6ZVK1 233 aa12.66□□□□□ -0.38
HNRNPU-227ENST00000640264 RNF180Q86T96 592 aa12.66□□□□□ -0.38
HNRNPU-227ENST00000640264 AACSQ86V21 672 aa12.66□□□□□ -0.38
HNRNPU-227ENST00000640264 MAML3Q96JK9 1138 aa12.66□□□□□ -0.38
HNRNPU-227ENST00000640264 RIOK1Q9BRS2 568 aaKnown RBP12.66□□□□□ -0.38
HNRNPU-227ENST00000640264 CRNKL1Q9BZJ0 848 aaKnown RBP12.66□□□□□ -0.38
HNRNPU-227ENST00000640264 XPNPEP3Q9NQH7 507 aa12.66□□□□□ -0.38
HNRNPU-227ENST00000640264 MCM9Q9NXL9 1143 aa12.66□□□□□ -0.38
HNRNPU-227ENST00000640264 A0A0G2JMZ2 1700 aa12.65□□□□□ -0.38
HNRNPU-227ENST00000640264 SLC25A27O95847 323 aa12.65□□□□□ -0.38
HNRNPU-227ENST00000640264 RAG1P15918 1043 aa12.65□□□□□ -0.38
HNRNPU-227ENST00000640264 MCM4P33991 863 aa12.65□□□□□ -0.38
HNRNPU-227ENST00000640264 TTF1Q15361 905 aaPredicted RBP12.65□□□□□ -0.38
HNRNPU-227ENST00000640264 SH2D4AQ9H788 454 aa12.65□□□□□ -0.38
HNRNPU-227ENST00000640264 ARHGEF10LQ9HCE6 1279 aa12.65□□□□□ -0.38
HNRNPU-227ENST00000640264 MYH8P13535 1937 aa12.64□□□□□ -0.39
HNRNPU-227ENST00000640264 KIAA0355O15063 1070 aa12.64□□□□□ -0.39
HNRNPU-227ENST00000640264 PQBP1O60828 265 aaKnown RBP12.64□□□□□ -0.39
HNRNPU-227ENST00000640264 PTMSP20962 102 aa12.64□□□□□ -0.39
HNRNPU-227ENST00000640264 FPGSQ05932 587 aa12.64□□□□□ -0.39
HNRNPU-227ENST00000640264 SAMD1Q6SPF0 538 aaPredicted RBP12.64□□□□□ -0.39
HNRNPU-227ENST00000640264 ATG4CQ96DT6 458 aa12.64□□□□□ -0.39
HNRNPU-227ENST00000640264 MMP19Q99542 508 aa12.64□□□□□ -0.39
HNRNPU-227ENST00000640264 TMEM39AQ9NV64 488 aa12.64□□□□□ -0.39
HNRNPU-227ENST00000640264 SWAP70Q9UH65 585 aa12.64□□□□□ -0.39
HNRNPU-227ENST00000640264 CDH23Q9H251 3354 aa12.64□□□□□ -0.39
HNRNPU-227ENST00000640264 SALL3Q9BXA9 1300 aa12.63□□□□□ -0.39
HNRNPU-227ENST00000640264 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.63□□□□□ -0.39
HNRNPU-227ENST00000640264 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.63□□□□□ -0.39
HNRNPU-227ENST00000640264 PGK1P00558 417 aa12.63□□□□□ -0.39
HNRNPU-227ENST00000640264 ITGB8P26012 769 aa12.63□□□□□ -0.39
HNRNPU-227ENST00000640264 EPHB4P54760 987 aa12.63□□□□□ -0.39
HNRNPU-227ENST00000640264 KCTD2Q14681 263 aa12.63□□□□□ -0.39
HNRNPU-227ENST00000640264 KIAA1755Q5JYT7 1200 aa12.63□□□□□ -0.39
HNRNPU-227ENST00000640264 SLC9C2Q5TAH2 1124 aa12.63□□□□□ -0.39
HNRNPU-227ENST00000640264 SPICE1Q8N0Z3 855 aa12.63□□□□□ -0.39
HNRNPU-227ENST00000640264 TINF2Q9BSI4 451 aa12.63□□□□□ -0.39
HNRNPU-227ENST00000640264 IL1RAPL2Q9NP60 686 aa12.63□□□□□ -0.39
HNRNPU-227ENST00000640264 DIS3Q9Y2L1 958 aaKnown RBP12.63□□□□□ -0.39
HNRNPU-227ENST00000640264 TMX2Q9Y320 296 aa12.63□□□□□ -0.39
HNRNPU-227ENST00000640264 PLXNA1Q9UIW2 1896 aa12.63□□□□□ -0.39
HNRNPU-227ENST00000640264 SPTBN5Q9NRC6 3674 aaKnown RBP12.62□□□□□ -0.39
HNRNPU-227ENST00000640264 A0A1W2PQ45 241 aaPredicted RBP12.62□□□□□ -0.39
HNRNPU-227ENST00000640264 A0A1W2PQY0 241 aa12.62□□□□□ -0.39
HNRNPU-227ENST00000640264 DDX11L8A8MPP1 907 aa12.62□□□□□ -0.39
HNRNPU-227ENST00000640264 DCDC2CA8MYV0 355 aa12.62□□□□□ -0.39
HNRNPU-227ENST00000640264 WDR46O15213 610 aaKnown RBP12.62□□□□□ -0.39
HNRNPU-227ENST00000640264 PDE6AP16499 860 aa12.62□□□□□ -0.39
HNRNPU-227ENST00000640264 ICA1Q05084 483 aa12.62□□□□□ -0.39
HNRNPU-227ENST00000640264 GRIN2CQ14957 1233 aa12.62□□□□□ -0.39
HNRNPU-227ENST00000640264 TMEM132BQ14DG7 1078 aa12.62□□□□□ -0.39
HNRNPU-227ENST00000640264 RABEP1Q15276 862 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms