RNA–Protein interactions for RNA: ENST00000639595.1

NECAP1-218, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-218ENST00000639595 VSTM4Q8IW00 320 aa9.8□□□□□ -0.84
NECAP1-218ENST00000639595 SP8Q8IXZ3 490 aa9.8□□□□□ -0.84
NECAP1-218ENST00000639595 BLIDQ8IZY5 108 aa9.8□□□□□ -0.84
NECAP1-218ENST00000639595 NEDD1Q8NHV4 660 aa9.8□□□□□ -0.84
NECAP1-218ENST00000639595 DPF2Q92785 391 aa9.8□□□□□ -0.84
NECAP1-218ENST00000639595 C16orf45Q96MC5 204 aaPredicted RBP9.8□□□□□ -0.84
NECAP1-218ENST00000639595 GSDMAQ96QA5 445 aa9.8□□□□□ -0.84
NECAP1-218ENST00000639595 MED15Q96RN5 788 aa9.8□□□□□ -0.84
NECAP1-218ENST00000639595 TMEM47Q9BQJ4 181 aa9.8□□□□□ -0.84
NECAP1-218ENST00000639595 QTRT2Q9H974 415 aaKnown RBP9.8□□□□□ -0.84
NECAP1-218ENST00000639595 PCDHA4Q9UN74 947 aa9.8□□□□□ -0.84
NECAP1-218ENST00000639595 CYTH3O43739 400 aa9.8□□□□□ -0.84
NECAP1-218ENST00000639595 SERPINC1P01008 464 aa9.8□□□□□ -0.84
NECAP1-218ENST00000639595 SMARCA1P28370 1054 aa9.8□□□□□ -0.84
NECAP1-218ENST00000639595 HSPA1LP34931 641 aa9.8□□□□□ -0.84
NECAP1-218ENST00000639595 CDK8P49336 464 aa9.8□□□□□ -0.84
NECAP1-218ENST00000639595 DPYDQ12882 1025 aa9.8□□□□□ -0.84
NECAP1-218ENST00000639595 E2F4Q16254 413 aa9.8□□□□□ -0.84
NECAP1-218ENST00000639595 MFSD14BQ5SR56 506 aa9.8□□□□□ -0.84
NECAP1-218ENST00000639595 MAPKAPK5Q8IW41 473 aa9.8□□□□□ -0.84
NECAP1-218ENST00000639595 GRAMD1CQ8IYS0 662 aa9.8□□□□□ -0.84
NECAP1-218ENST00000639595 SLC44A5Q8NCS7 719 aa9.8□□□□□ -0.84
NECAP1-218ENST00000639595 DHX58Q96C10 678 aa9.8□□□□□ -0.84
NECAP1-218ENST00000639595 TMX1Q9H3N1 280 aa9.8□□□□□ -0.84
NECAP1-218ENST00000639595 SUGT1Q9Y2Z0 365 aa9.8□□□□□ -0.84
NECAP1-218ENST00000639595 UBR3Q6ZT12 1888 aa9.79□□□□□ -0.84
NECAP1-218ENST00000639595 PSDA5PKW4 1024 aaPredicted RBP9.79□□□□□ -0.84
NECAP1-218ENST00000639595 USP27XA6NNY8 438 aa9.79□□□□□ -0.84
NECAP1-218ENST00000639595 ADAMTS3O15072 1205 aa9.79□□□□□ -0.84
NECAP1-218ENST00000639595 IL17AQ16552 155 aa9.79□□□□□ -0.84
NECAP1-218ENST00000639595 E4F1Q66K89 784 aaPredicted RBP9.79□□□□□ -0.84
NECAP1-218ENST00000639595 TYW1BQ6NUM6 668 aa9.79□□□□□ -0.84
NECAP1-218ENST00000639595 TEX11Q8IYF3 940 aa9.79□□□□□ -0.84
NECAP1-218ENST00000639595 PROM2Q8N271 834 aa9.79□□□□□ -0.84
NECAP1-218ENST00000639595 SPZ1Q9BXG8 430 aa9.79□□□□□ -0.84
NECAP1-218ENST00000639595 INTS13Q9NVM9 706 aa9.79□□□□□ -0.84
NECAP1-218ENST00000639595 BARHL2Q9NY43 387 aa9.79□□□□□ -0.84
NECAP1-218ENST00000639595 NFE2L3Q9Y4A8 694 aa9.79□□□□□ -0.84
NECAP1-218ENST00000639595 FLT1P17948 1338 aa9.79□□□□□ -0.84
NECAP1-218ENST00000639595 VWA3AA6NCI4 1184 aa9.79□□□□□ -0.84
NECAP1-218ENST00000639595 SLC4A8Q2Y0W8 1093 aa9.79□□□□□ -0.84
NECAP1-218ENST00000639595 CFAP100Q494V2 611 aa9.79□□□□□ -0.84
NECAP1-218ENST00000639595 IQUBQ8NA54 791 aa9.79□□□□□ -0.84
NECAP1-218ENST00000639595 KIF2AO00139 706 aaPredicted RBP9.78□□□□□ -0.84
NECAP1-218ENST00000639595 LONP1P36776 959 aaKnown RBP9.78□□□□□ -0.84
NECAP1-218ENST00000639595 TBX2Q13207 712 aaPredicted RBP9.78□□□□□ -0.84
NECAP1-218ENST00000639595 CUL4BQ13620 913 aa9.78□□□□□ -0.84
NECAP1-218ENST00000639595 PTPN14Q15678 1187 aa9.78□□□□□ -0.84
NECAP1-218ENST00000639595 CEP135Q66GS9 1140 aa9.78□□□□□ -0.84
NECAP1-218ENST00000639595 CCDC112Q8NEF3 446 aa9.78□□□□□ -0.84
NECAP1-218ENST00000639595 CCDC148Q8NFR7 591 aa9.78□□□□□ -0.84
NECAP1-218ENST00000639595 EYA3Q99504 573 aa9.78□□□□□ -0.84
NECAP1-218ENST00000639595 SAP30BPQ9UHR5 308 aaKnown RBP9.78□□□□□ -0.84
NECAP1-218ENST00000639595 ATP6V0A2Q9Y487 856 aa9.78□□□□□ -0.84
NECAP1-218ENST00000639595 MYH6P13533 1939 aa9.78□□□□□ -0.84
NECAP1-218ENST00000639595 STXBP3O00186 592 aa9.78□□□□□ -0.84
NECAP1-218ENST00000639595 NRDCO43847 1150 aa9.78□□□□□ -0.84
NECAP1-218ENST00000639595 TUBB4AP04350 444 aa9.78□□□□□ -0.84
NECAP1-218ENST00000639595 MCM7P33993 719 aa9.78□□□□□ -0.84
NECAP1-218ENST00000639595 ZNF827Q17R98 1081 aa9.78□□□□□ -0.84
NECAP1-218ENST00000639595 WWC2Q6AWC2 1192 aa9.78□□□□□ -0.84
NECAP1-218ENST00000639595 PDXDC2PQ6P474 469 aa9.78□□□□□ -0.84
NECAP1-218ENST00000639595 KRT27Q7Z3Y8 459 aa9.78□□□□□ -0.84
NECAP1-218ENST00000639595 COA1Q9GZY4 146 aa9.78□□□□□ -0.84
NECAP1-218ENST00000639595 STX8Q9UNK0 236 aa9.78□□□□□ -0.84
NECAP1-218ENST00000639595 SNED1Q8TER0 1413 aa9.78□□□□□ -0.84
NECAP1-218ENST00000639595 KLRF2D3W0D1 207 aa9.77□□□□□ -0.84
NECAP1-218ENST00000639595 NR1I3Q14994 352 aa9.77□□□□□ -0.84
NECAP1-218ENST00000639595 SYCP1Q15431 976 aa9.77□□□□□ -0.84
NECAP1-218ENST00000639595 SPATA1Q5VX52 437 aa9.77□□□□□ -0.84
NECAP1-218ENST00000639595 GPKOWQ92917 476 aaPredicted RBP eCLIP9.77□□□□□ -0.84
NECAP1-218ENST00000639595 ZMYND12Q9H0C1 365 aa9.77□□□□□ -0.84
NECAP1-218ENST00000639595 PCDHA6Q9UN73 950 aa9.77□□□□□ -0.84
NECAP1-218ENST00000639595 PCDHA8Q9Y5H6 950 aa9.77□□□□□ -0.84
NECAP1-218ENST00000639595 PPP1R3GB7ZBB8 358 aa9.77□□□□□ -0.85
NECAP1-218ENST00000639595 C6orf229H3BNL8 230 aa9.77□□□□□ -0.85
NECAP1-218ENST00000639595 LAD1O00515 517 aa9.77□□□□□ -0.85
NECAP1-218ENST00000639595 TRIM37O94972 964 aa9.77□□□□□ -0.85
NECAP1-218ENST00000639595 TOP1P11387 765 aaKnown RBP9.77□□□□□ -0.85
NECAP1-218ENST00000639595 AFMP43652 599 aa9.77□□□□□ -0.85
NECAP1-218ENST00000639595 GABPAQ06546 454 aa9.77□□□□□ -0.85
NECAP1-218ENST00000639595 TXNRD1Q16881 649 aa9.77□□□□□ -0.85
NECAP1-218ENST00000639595 APTXQ7Z2E3 356 aaKnown RBP9.77□□□□□ -0.85
NECAP1-218ENST00000639595 ZNF710Q8N1W2 664 aa9.77□□□□□ -0.85
NECAP1-218ENST00000639595 MTRQ99707 1265 aa9.77□□□□□ -0.85
NECAP1-218ENST00000639595 DAGLAQ9Y4D2 1042 aa9.77□□□□□ -0.85
NECAP1-218ENST00000639595 TMEM232C9JQI7 657 aa9.76□□□□□ -0.85
NECAP1-218ENST00000639595 PPEF1O14829 653 aaPredicted RBP9.76□□□□□ -0.85
NECAP1-218ENST00000639595 SRGNP10124 158 aa9.76□□□□□ -0.85
NECAP1-218ENST00000639595 CD44P16070 742 aaKnown RBP9.76□□□□□ -0.85
NECAP1-218ENST00000639595 PRPHP41219 470 aa9.76□□□□□ -0.85
NECAP1-218ENST00000639595 CDKAL1Q5VV42 579 aa9.76□□□□□ -0.85
NECAP1-218ENST00000639595 NLGN1Q8N2Q7 840 aa9.76□□□□□ -0.85
NECAP1-218ENST00000639595 SAMSN1Q9NSI8 373 aaKnown RBP9.76□□□□□ -0.85
NECAP1-218ENST00000639595 PLIN4Q96Q06 1357 aa9.76□□□□□ -0.85
NECAP1-218ENST00000639595 A0A1B0GTH6 734 aa9.76□□□□□ -0.85
NECAP1-218ENST00000639595 CCDC194A0A1B0GVG4 234 aa9.76□□□□□ -0.85
NECAP1-218ENST00000639595 GTPBP6O43824 516 aaPredicted RBP9.76□□□□□ -0.85
NECAP1-218ENST00000639595 PARP1P09874 1014 aaKnown RBP9.76□□□□□ -0.85
NECAP1-218ENST00000639595 GTF2IP78347 998 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms