RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 USP17L20D6RJB6 530 aa22.72■■□□□ 1.23
HLA-A-209ENST00000638375 BMP3P12645 472 aa22.72■■□□□ 1.23
HLA-A-209ENST00000638375 SLC1A4P43007 532 aa22.72■■□□□ 1.23
HLA-A-209ENST00000638375 FGD1P98174 961 aa22.72■■□□□ 1.23
HLA-A-209ENST00000638375 USP17L24Q0WX57 530 aa22.72■■□□□ 1.23
HLA-A-209ENST00000638375 TROAPQ12815 778 aa22.72■■□□□ 1.23
HLA-A-209ENST00000638375 MYL10Q9BUA6 226 aa22.72■■□□□ 1.23
HLA-A-209ENST00000638375 ZCCHC17Q9NP64 241 aaKnown RBP22.72■■□□□ 1.23
HLA-A-209ENST00000638375 BRPF3Q9ULD4 1205 aa22.72■■□□□ 1.23
HLA-A-209ENST00000638375 NEK4P51957 841 aa22.71■■□□□ 1.23
HLA-A-209ENST00000638375 PABPC4Q13310 644 aaKnown RBP eCLIP22.71■■□□□ 1.23
HLA-A-209ENST00000638375 OTUD7BQ6GQQ9 843 aa22.71■■□□□ 1.23
HLA-A-209ENST00000638375 KCTD1Q719H9 257 aa22.71■■□□□ 1.23
HLA-A-209ENST00000638375 CATIPQ7Z7H3 387 aa22.71■■□□□ 1.23
HLA-A-209ENST00000638375 TANGO6Q9C0B7 1094 aa22.71■■□□□ 1.23
HLA-A-209ENST00000638375 ASCC2Q9H1I8 757 aaPredicted RBP22.71■■□□□ 1.23
HLA-A-209ENST00000638375 ALDH8A1Q9H2A2 487 aaPredicted RBP22.71■■□□□ 1.23
HLA-A-209ENST00000638375 DDAH1O94760 285 aa22.7■■□□□ 1.22
HLA-A-209ENST00000638375 CYP2C8P10632 490 aa22.7■■□□□ 1.22
HLA-A-209ENST00000638375 ZNF543Q08ER8 600 aa22.7■■□□□ 1.22
HLA-A-209ENST00000638375 APOBRQ0VD83 1088 aa22.7■■□□□ 1.22
HLA-A-209ENST00000638375 CCDC96Q2M329 555 aa22.7■■□□□ 1.22
HLA-A-209ENST00000638375 APOA5Q6Q788 366 aa22.7■■□□□ 1.22
HLA-A-209ENST00000638375 RAB11FIP4Q86YS3 637 aa22.7■■□□□ 1.22
HLA-A-209ENST00000638375 FBXO28Q9NVF7 368 aa22.7■■□□□ 1.22
HLA-A-209ENST00000638375 SLC12A7Q9Y666 1083 aa22.7■■□□□ 1.22
HLA-A-209ENST00000638375 FRMPD2Q68DX3 1309 aaPredicted RBP22.7■■□□□ 1.22
HLA-A-209ENST00000638375 KLF18A0A0U1RQI7 1052 aa22.69■■□□□ 1.22
HLA-A-209ENST00000638375 TMEM232C9JQI7 657 aa22.69■■□□□ 1.22
HLA-A-209ENST00000638375 GOLGA8HP0CJ92 632 aa22.69■■□□□ 1.22
HLA-A-209ENST00000638375 RXRAP19793 462 aa22.69■■□□□ 1.22
HLA-A-209ENST00000638375 OSBPP22059 807 aa22.69■■□□□ 1.22
HLA-A-209ENST00000638375 IRX3P78415 501 aaPredicted RBP22.69■■□□□ 1.22
HLA-A-209ENST00000638375 GRM4Q14833 912 aa22.69■■□□□ 1.22
HLA-A-209ENST00000638375 RABEP1Q15276 862 aa22.69■■□□□ 1.22
HLA-A-209ENST00000638375 TAF1CQ15572 869 aaPredicted RBP22.69■■□□□ 1.22
HLA-A-209ENST00000638375 TTBK2Q6IQ55 1244 aa22.69■■□□□ 1.22
HLA-A-209ENST00000638375 JMYQ8N9B5 988 aa22.69■■□□□ 1.22
HLA-A-209ENST00000638375 NUP133Q8WUM0 1156 aa22.69■■□□□ 1.22
HLA-A-209ENST00000638375 P2RX7Q99572 595 aaKnown RBP22.69■■□□□ 1.22
HLA-A-209ENST00000638375 RNF186Q9NXI6 227 aa22.69■■□□□ 1.22
HLA-A-209ENST00000638375 ISY1Q9ULR0 285 aaKnown RBP22.69■■□□□ 1.22
HLA-A-209ENST00000638375 FLOT1O75955 427 aa22.68■■□□□ 1.22
HLA-A-209ENST00000638375 ALDH1A1P00352 501 aa22.68■■□□□ 1.22
HLA-A-209ENST00000638375 AK2P54819 239 aa22.68■■□□□ 1.22
HLA-A-209ENST00000638375 MAP2K1Q02750 393 aaPredicted RBP22.68■■□□□ 1.22
HLA-A-209ENST00000638375 PARK7Q99497 189 aaKnown RBP22.68■■□□□ 1.22
HLA-A-209ENST00000638375 LARP6Q9BRS8 491 aaKnown RBP22.68■■□□□ 1.22
HLA-A-209ENST00000638375 GPCPD1Q9NPB8 672 aa22.68■■□□□ 1.22
HLA-A-209ENST00000638375 MAD2L2Q9UI95 211 aa22.68■■□□□ 1.22
HLA-A-209ENST00000638375 PNMA3Q9UL41 463 aa22.68■■□□□ 1.22
HLA-A-209ENST00000638375 ADGRA2Q96PE1 1338 aa22.67■■□□□ 1.22
HLA-A-209ENST00000638375 SPDYE16A6NNV3 312 aaPredicted RBP22.67■■□□□ 1.22
HLA-A-209ENST00000638375 CA12O43570 354 aa22.67■■□□□ 1.22
HLA-A-209ENST00000638375 PARP1P09874 1014 aaKnown RBP22.67■■□□□ 1.22
HLA-A-209ENST00000638375 DSG3P32926 999 aa22.67■■□□□ 1.22
HLA-A-209ENST00000638375 EVCP57679 992 aa22.67■■□□□ 1.22
HLA-A-209ENST00000638375 CRHR2Q13324 411 aa22.67■■□□□ 1.22
HLA-A-209ENST00000638375 ASPRV1Q53RT3 343 aa22.67■■□□□ 1.22
HLA-A-209ENST00000638375 POTEEQ6S8J3 1075 aa22.67■■□□□ 1.22
HLA-A-209ENST00000638375 MICU3Q86XE3 530 aa22.67■■□□□ 1.22
HLA-A-209ENST00000638375 STAG2Q8N3U4 1231 aa22.67■■□□□ 1.22
HLA-A-209ENST00000638375 R3HDMLQ9H3Y0 253 aa22.67■■□□□ 1.22
HLA-A-209ENST00000638375 FEM1BQ9UK73 627 aa22.67■■□□□ 1.22
HLA-A-209ENST00000638375 CEP350Q5VT06 3117 aa22.67■■□□□ 1.22
HLA-A-209ENST00000638375 RLFQ13129 1914 aa22.67■■□□□ 1.22
HLA-A-209ENST00000638375 PALM3A6NDB9 673 aaPredicted RBP22.66■■□□□ 1.22
HLA-A-209ENST00000638375 PLA2G6O60733 806 aa22.66■■□□□ 1.22
HLA-A-209ENST00000638375 TRPA1O75762 1119 aa22.66■■□□□ 1.22
HLA-A-209ENST00000638375 HERVK_113P62684 666 aa22.66■■□□□ 1.22
HLA-A-209ENST00000638375 COG2Q14746 738 aa22.66■■□□□ 1.22
HLA-A-209ENST00000638375 GPATCH4Q5T3I0 446 aaKnown RBP22.66■■□□□ 1.22
HLA-A-209ENST00000638375 BTNL9Q6UXG8 535 aa22.66■■□□□ 1.22
HLA-A-209ENST00000638375 ATG4CQ96DT6 458 aa22.66■■□□□ 1.22
HLA-A-209ENST00000638375 MAP3K14Q99558 947 aa22.66■■□□□ 1.22
HLA-A-209ENST00000638375 SLF1Q9BQI6 1058 aa22.66■■□□□ 1.22
HLA-A-209ENST00000638375 WBP1LQ9NX94 342 aa22.66■■□□□ 1.22
HLA-A-209ENST00000638375 PPP1R9AQ9ULJ8 1098 aa22.66■■□□□ 1.22
HLA-A-209ENST00000638375 MYPNQ86TC9 1320 aa22.65■■□□□ 1.22
HLA-A-209ENST00000638375 ZBTB43O43298 467 aa22.65■■□□□ 1.22
HLA-A-209ENST00000638375 SLC16A2P36021 539 aa22.65■■□□□ 1.22
HLA-A-209ENST00000638375 STAT2P52630 851 aa22.65■■□□□ 1.22
HLA-A-209ENST00000638375 SAMD1Q6SPF0 538 aaPredicted RBP22.65■■□□□ 1.22
HLA-A-209ENST00000638375 SYNE3Q6ZMZ3 975 aa22.65■■□□□ 1.22
HLA-A-209ENST00000638375 FAM160B2Q86V87 743 aa22.65■■□□□ 1.22
HLA-A-209ENST00000638375 CCDC144CPQ8IYA2 1237 aa22.65■■□□□ 1.22
HLA-A-209ENST00000638375 CFHR5Q9BXR6 569 aa22.65■■□□□ 1.22
HLA-A-209ENST00000638375 CPVLQ9H3G5 476 aa22.65■■□□□ 1.22
HLA-A-209ENST00000638375 ZFYVE28Q9HCC9 887 aa22.65■■□□□ 1.22
HLA-A-209ENST00000638375 HPS5Q9UPZ3 1129 aa22.65■■□□□ 1.22
HLA-A-209ENST00000638375 PARP14Q460N5 1801 aa22.65■■□□□ 1.22
HLA-A-209ENST00000638375 GOLGA8BA8MQT2 603 aa22.64■■□□□ 1.21
HLA-A-209ENST00000638375 CALM1P0DP23 149 aa22.64■■□□□ 1.21
HLA-A-209ENST00000638375 CALM2P0DP24 149 aa22.64■■□□□ 1.21
HLA-A-209ENST00000638375 CALM3P0DP25 149 aa22.64■■□□□ 1.21
HLA-A-209ENST00000638375 RCAN1P53805 252 aa22.64■■□□□ 1.21
HLA-A-209ENST00000638375 SLC35G1Q2M3R5 365 aa22.64■■□□□ 1.21
HLA-A-209ENST00000638375 LBX2Q6XYB7 198 aa22.64■■□□□ 1.21
HLA-A-209ENST00000638375 NOL8Q76FK4 1167 aaKnown RBP22.64■■□□□ 1.21
HLA-A-209ENST00000638375 CTCFLQ8NI51 663 aaPredicted RBP22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms