RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 SYCE1LA8MT33 242 aa16.52■□□□□ 0.23
UBE3A-227ENST00000638011 KRT10P13645 584 aa16.52■□□□□ 0.23
UBE3A-227ENST00000638011 RAB44Q7Z6P3 723 aaPredicted RBP16.52■□□□□ 0.23
UBE3A-227ENST00000638011 CCDC61Q9Y6R9 512 aa16.52■□□□□ 0.23
UBE3A-227ENST00000638011 CC2D2AQ9P2K1 1620 aa16.52■□□□□ 0.23
UBE3A-227ENST00000638011 FRMD3A2A2Y4 597 aa16.52■□□□□ 0.23
UBE3A-227ENST00000638011 LONRF2Q1L5Z9 754 aa16.52■□□□□ 0.23
UBE3A-227ENST00000638011 TTC25Q96NG3 672 aa16.52■□□□□ 0.23
UBE3A-227ENST00000638011 DBNLQ9UJU6 430 aaKnown RBP16.52■□□□□ 0.23
UBE3A-227ENST00000638011 KIAA2013Q8IYS2 634 aa16.52■□□□□ 0.23
UBE3A-227ENST00000638011 RUBCNQ92622 972 aa16.52■□□□□ 0.23
UBE3A-227ENST00000638011 XRCC5P13010 732 aaKnown RBP16.51■□□□□ 0.23
UBE3A-227ENST00000638011 CAPRIN2Q6IMN6 1127 aaKnown RBP16.51■□□□□ 0.23
UBE3A-227ENST00000638011 NBPF3Q9H094 633 aa16.51■□□□□ 0.23
UBE3A-227ENST00000638011 TMOD3Q9NYL9 352 aa16.51■□□□□ 0.23
UBE3A-227ENST00000638011 NFE2L3Q9Y4A8 694 aa16.51■□□□□ 0.23
UBE3A-227ENST00000638011 AP2B1P63010 937 aa16.51■□□□□ 0.23
UBE3A-227ENST00000638011 BIRC3Q13489 604 aa16.51■□□□□ 0.23
UBE3A-227ENST00000638011 ESCO1Q5FWF5 840 aa16.51■□□□□ 0.23
UBE3A-227ENST00000638011 EMBQ6PCB8 327 aa16.51■□□□□ 0.23
UBE3A-227ENST00000638011 CTNND1O60716 968 aaKnown RBP16.51■□□□□ 0.23
UBE3A-227ENST00000638011 MMEP08473 750 aa16.51■□□□□ 0.23
UBE3A-227ENST00000638011 ADCY8P40145 1251 aa16.51■□□□□ 0.23
UBE3A-227ENST00000638011 BLVRAP53004 296 aa16.51■□□□□ 0.23
UBE3A-227ENST00000638011 TAF12Q16514 161 aa16.51■□□□□ 0.23
UBE3A-227ENST00000638011 TEX9Q8N6V9 391 aa16.51■□□□□ 0.23
UBE3A-227ENST00000638011 RETREG2Q8NC44 543 aa16.51■□□□□ 0.23
UBE3A-227ENST00000638011 TOP2BQ02880 1626 aa16.51■□□□□ 0.23
UBE3A-227ENST00000638011 HGSO14964 777 aaPredicted RBP16.51■□□□□ 0.23
UBE3A-227ENST00000638011 LRRC37BQ96QE4 947 aa16.51■□□□□ 0.23
UBE3A-227ENST00000638011 CARD10Q9BWT7 1032 aa16.51■□□□□ 0.23
UBE3A-227ENST00000638011 MRPL28Q13084 256 aaKnown RBP16.51■□□□□ 0.23
UBE3A-227ENST00000638011 C20orf194Q5TEA3 1177 aa16.51■□□□□ 0.23
UBE3A-227ENST00000638011 GSDMAQ96QA5 445 aa16.51■□□□□ 0.23
UBE3A-227ENST00000638011 CABP1Q9NZU7 370 aa16.51■□□□□ 0.23
UBE3A-227ENST00000638011 VWA3AA6NCI4 1184 aa16.51■□□□□ 0.23
UBE3A-227ENST00000638011 KRR1Q13601 381 aaKnown RBP16.51■□□□□ 0.23
UBE3A-227ENST00000638011 NECAB1Q8N987 351 aa16.51■□□□□ 0.23
UBE3A-227ENST00000638011 NT5C3AQ9H0P0 336 aa16.51■□□□□ 0.23
UBE3A-227ENST00000638011 ATF2P15336 505 aa16.51■□□□□ 0.23
UBE3A-227ENST00000638011 STX17P56962 302 aa16.51■□□□□ 0.23
UBE3A-227ENST00000638011 RINT1Q6NUQ1 792 aa16.51■□□□□ 0.23
UBE3A-227ENST00000638011 PRPF38AQ8NAV1 312 aaKnown RBP16.51■□□□□ 0.23
UBE3A-227ENST00000638011 RHPN1Q8TCX5 695 aa16.51■□□□□ 0.23
UBE3A-227ENST00000638011 TRIM33Q9UPN9 1127 aa16.51■□□□□ 0.23
UBE3A-227ENST00000638011 CCDC78A2IDD5 438 aa16.5■□□□□ 0.23
UBE3A-227ENST00000638011 OR9Q1Q8NGQ5 310 aa16.5■□□□□ 0.23
UBE3A-227ENST00000638011 VTI1AQ96AJ9 217 aa16.5■□□□□ 0.23
UBE3A-227ENST00000638011 KLHL7Q8IXQ5 586 aa16.5■□□□□ 0.23
UBE3A-227ENST00000638011 TRAIPQ9BWF2 469 aa16.5■□□□□ 0.23
UBE3A-227ENST00000638011 SEPT3Q9UH03 358 aa16.5■□□□□ 0.23
UBE3A-227ENST00000638011 NSFP46459 744 aaKnown RBP16.5■□□□□ 0.23
UBE3A-227ENST00000638011 CREB3L3Q68CJ9 461 aa16.5■□□□□ 0.23
UBE3A-227ENST00000638011 TRIM11Q96F44 468 aa16.5■□□□□ 0.23
UBE3A-227ENST00000638011 PAG1Q9NWQ8 432 aa16.5■□□□□ 0.23
UBE3A-227ENST00000638011 MICAL3Q7RTP6 2002 aa16.5■□□□□ 0.23
UBE3A-227ENST00000638011 SCAF11Q99590 1463 aaKnown RBP16.5■□□□□ 0.23
UBE3A-227ENST00000638011 SNAPC4Q5SXM2 1469 aa16.5■□□□□ 0.23
UBE3A-227ENST00000638011 IL15P40933 162 aaPredicted RBP16.5■□□□□ 0.23
UBE3A-227ENST00000638011 TBC1D23Q9NUY8 699 aa16.5■□□□□ 0.23
UBE3A-227ENST00000638011 NINQ8N4C6 2090 aa16.5■□□□□ 0.23
UBE3A-227ENST00000638011 ATAD2BQ9ULI0 1458 aa16.5■□□□□ 0.23
UBE3A-227ENST00000638011 FGD4Q96M96 766 aa16.5■□□□□ 0.23
UBE3A-227ENST00000638011 GRIN1Q05586 938 aa16.5■□□□□ 0.23
UBE3A-227ENST00000638011 FLOT2Q14254 428 aa16.5■□□□□ 0.23
UBE3A-227ENST00000638011 SLFNL1Q499Z3 407 aa16.5■□□□□ 0.23
UBE3A-227ENST00000638011 GIPC2Q8TF65 315 aa16.5■□□□□ 0.23
UBE3A-227ENST00000638011 DEAF1O75398 565 aaPredicted RBP16.49■□□□□ 0.23
UBE3A-227ENST00000638011 ART3Q13508 389 aa16.49■□□□□ 0.23
UBE3A-227ENST00000638011 MYH7P12883 1935 aa16.49■□□□□ 0.23
UBE3A-227ENST00000638011 GUCY2FP51841 1108 aa16.49■□□□□ 0.23
UBE3A-227ENST00000638011 HAND2P61296 217 aa16.49■□□□□ 0.23
UBE3A-227ENST00000638011 ADCY2Q08462 1091 aa16.49■□□□□ 0.23
UBE3A-227ENST00000638011 C2CD5Q86YS7 1000 aa16.49■□□□□ 0.23
UBE3A-227ENST00000638011 MYD88Q99836 296 aa16.49■□□□□ 0.23
UBE3A-227ENST00000638011 CDC23Q9UJX2 597 aa16.49■□□□□ 0.23
UBE3A-227ENST00000638011 MSH6P52701 1360 aa16.49■□□□□ 0.23
UBE3A-227ENST00000638011 VAT1LQ9HCJ6 419 aa16.49■□□□□ 0.23
UBE3A-227ENST00000638011 ZNF215Q9UL58 517 aaPredicted RBP16.49■□□□□ 0.23
UBE3A-227ENST00000638011 PDE6CP51160 858 aa16.49■□□□□ 0.23
UBE3A-227ENST00000638011 PDE4DQ08499 809 aa16.49■□□□□ 0.23
UBE3A-227ENST00000638011 ANKRD42Q8N9B4 389 aa16.49■□□□□ 0.23
UBE3A-227ENST00000638011 ING2Q9H160 280 aa16.49■□□□□ 0.23
UBE3A-227ENST00000638011 LDHAL6AQ6ZMR3 332 aa16.49■□□□□ 0.23
UBE3A-227ENST00000638011 SLC17A8Q8NDX2 589 aa16.49■□□□□ 0.23
UBE3A-227ENST00000638011 VPS16Q9H269 839 aa16.49■□□□□ 0.23
UBE3A-227ENST00000638011 ATP6V0A4Q9HBG4 840 aa16.49■□□□□ 0.23
UBE3A-227ENST00000638011 IQSEC3Q9UPP2 1182 aaPredicted RBP16.49■□□□□ 0.23
UBE3A-227ENST00000638011 SOS2Q07890 1332 aaPredicted RBP16.48■□□□□ 0.23
UBE3A-227ENST00000638011 FANCD2Q9BXW9 1451 aa16.48■□□□□ 0.23
UBE3A-227ENST00000638011 SRGAP2BP0DMP2 458 aa16.48■□□□□ 0.23
UBE3A-227ENST00000638011 TTC16Q8NEE8 873 aa16.48■□□□□ 0.23
UBE3A-227ENST00000638011 TMEM60Q9H2L4 133 aa16.48■□□□□ 0.23
UBE3A-227ENST00000638011 TRPC6Q9Y210 931 aa16.48■□□□□ 0.23
UBE3A-227ENST00000638011 ICA1LQ8NDH6 482 aa16.48■□□□□ 0.23
UBE3A-227ENST00000638011 SESN1Q9Y6P5 492 aa16.48■□□□□ 0.23
UBE3A-227ENST00000638011 GPC4O75487 556 aa16.48■□□□□ 0.23
UBE3A-227ENST00000638011 DHX9Q08211 1270 aaKnown RBP16.48■□□□□ 0.23
UBE3A-227ENST00000638011 CFAP70Q5T0N1 1121 aa16.48■□□□□ 0.23
UBE3A-227ENST00000638011 ZMYM4Q5VZL5 1548 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms