RNA–Protein interactions for RNA: ENST00000637981.1

CACNA1A-256, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,346 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-256	ENST00000637981	COG2	Q14746	738 aa		11.35	□□□□□ -0.59
CACNA1A-256	ENST00000637981	SEPT2	Q15019	361 aa		11.35	□□□□□ -0.59
CACNA1A-256	ENST00000637981	ZSCAN25	Q6NSZ9	544 aa		11.35	□□□□□ -0.59
CACNA1A-256	ENST00000637981	TICAM2	Q86XR7	235 aa		11.35	□□□□□ -0.59
CACNA1A-256	ENST00000637981	PLEKHM2	Q8IWE5	1019 aa		11.35	□□□□□ -0.59
CACNA1A-256	ENST00000637981	MYLIP	Q8WY64	445 aa		11.35	□□□□□ -0.59
CACNA1A-256	ENST00000637981	TANGO6	Q9C0B7	1094 aa		11.35	□□□□□ -0.59
CACNA1A-256	ENST00000637981	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	11.35	□□□□□ -0.59
CACNA1A-256	ENST00000637981	SPATC1L	Q9H0A9	340 aa		11.35	□□□□□ -0.59
CACNA1A-256	ENST00000637981	PDLIM7	Q9NR12	457 aa		11.35	□□□□□ -0.59
CACNA1A-256	ENST00000637981	PAG1	Q9NWQ8	432 aa		11.35	□□□□□ -0.59
CACNA1A-256	ENST00000637981	HOXC10	Q9NYD6	342 aa		11.35	□□□□□ -0.59
CACNA1A-256	ENST00000637981	SALL3	Q9BXA9	1300 aa		11.34	□□□□□ -0.59
CACNA1A-256	ENST00000637981	ZNF236	Q9UL36	1845 aa		11.34	□□□□□ -0.59
CACNA1A-256	ENST00000637981	MPHOSPH10	O00566	681 aa	Known RBP	11.34	□□□□□ -0.59
CACNA1A-256	ENST00000637981	COBL	O75128	1261 aa		11.34	□□□□□ -0.59
CACNA1A-256	ENST00000637981	POLR3D	P05423	398 aa	Predicted RBP	11.34	□□□□□ -0.59
CACNA1A-256	ENST00000637981	ADCYAP1R1	P41586	468 aa		11.34	□□□□□ -0.59
CACNA1A-256	ENST00000637981	SNX17	Q15036	470 aa		11.34	□□□□□ -0.59
CACNA1A-256	ENST00000637981	PRAMEF19	Q5SWL8	479 aa		11.34	□□□□□ -0.59
CACNA1A-256	ENST00000637981	SH3RF1	Q7Z6J0	888 aa		11.34	□□□□□ -0.59
CACNA1A-256	ENST00000637981	SHCBP1	Q8NEM2	672 aa		11.34	□□□□□ -0.59
CACNA1A-256	ENST00000637981	OTUD7A	Q8TE49	926 aa	Predicted RBP	11.34	□□□□□ -0.59
CACNA1A-256	ENST00000637981	FERMT2	Q96AC1	680 aa		11.34	□□□□□ -0.59
CACNA1A-256	ENST00000637981	TTYH1	Q9H313	450 aa	Predicted RBP	11.34	□□□□□ -0.59
CACNA1A-256	ENST00000637981	ANTXR1	Q9H6X2	564 aa		11.34	□□□□□ -0.59
CACNA1A-256	ENST00000637981	SLC5A4	Q9NY91	659 aa		11.34	□□□□□ -0.59
CACNA1A-256	ENST00000637981	VCAN	P13611	3396 aa		11.33	□□□□□ -0.59
CACNA1A-256	ENST00000637981		A0A1W2PRG0	241 aa		11.33	□□□□□ -0.6
CACNA1A-256	ENST00000637981	TRIM43B	A6NCK2	446 aa		11.33	□□□□□ -0.6
CACNA1A-256	ENST00000637981	GOLIM4	O00461	696 aa		11.33	□□□□□ -0.6
CACNA1A-256	ENST00000637981	FOSL2	P15408	326 aa		11.33	□□□□□ -0.6
CACNA1A-256	ENST00000637981	GABPA	Q06546	454 aa		11.33	□□□□□ -0.6
CACNA1A-256	ENST00000637981	PLS1	Q14651	629 aa		11.33	□□□□□ -0.6
CACNA1A-256	ENST00000637981	LRRC41	Q15345	812 aa		11.33	□□□□□ -0.6
CACNA1A-256	ENST00000637981	FAM47A	Q5JRC9	791 aa		11.33	□□□□□ -0.6
CACNA1A-256	ENST00000637981	NCAPG2	Q86XI2	1143 aa		11.33	□□□□□ -0.6
CACNA1A-256	ENST00000637981	MB21D1	Q8N884	522 aa		11.33	□□□□□ -0.6
CACNA1A-256	ENST00000637981	PI4K2B	Q8TCG2	481 aa		11.33	□□□□□ -0.6
CACNA1A-256	ENST00000637981	TRIM43	Q96BQ3	446 aa	Predicted RBP	11.33	□□□□□ -0.6
CACNA1A-256	ENST00000637981	EVI5L	Q96CN4	794 aa		11.33	□□□□□ -0.6
CACNA1A-256	ENST00000637981	MYH8	P13535	1937 aa		11.33	□□□□□ -0.6
CACNA1A-256	ENST00000637981	ZFY	P08048	801 aa	Predicted RBP	11.32	□□□□□ -0.6
CACNA1A-256	ENST00000637981	C1orf53	Q5VUE5	145 aa		11.32	□□□□□ -0.6
CACNA1A-256	ENST00000637981	PIP4P2	Q8N4L2	257 aa		11.32	□□□□□ -0.6
CACNA1A-256	ENST00000637981	MAML3	Q96JK9	1138 aa		11.32	□□□□□ -0.6
CACNA1A-256	ENST00000637981	RIOK1	Q9BRS2	568 aa	Known RBP	11.32	□□□□□ -0.6
CACNA1A-256	ENST00000637981	MROH8	Q9H579	483 aa		11.32	□□□□□ -0.6
CACNA1A-256	ENST00000637981	MCM9	Q9NXL9	1143 aa		11.32	□□□□□ -0.6
CACNA1A-256	ENST00000637981		A0A0G2JMZ2	1700 aa		11.32	□□□□□ -0.6
CACNA1A-256	ENST00000637981	BAZ2A	Q9UIF9	1905 aa	Known RBP	11.31	□□□□□ -0.6
CACNA1A-256	ENST00000637981	CDH23	Q9H251	3354 aa		11.31	□□□□□ -0.6
CACNA1A-256	ENST00000637981	MAGEB6P1	A0A0J9YX57	407 aa		11.31	□□□□□ -0.6
CACNA1A-256	ENST00000637981	TRIM6-TRIM34	B2RNG4	842 aa		11.31	□□□□□ -0.6
CACNA1A-256	ENST00000637981	FLOT1	O75955	427 aa		11.31	□□□□□ -0.6
CACNA1A-256	ENST00000637981	ITGB8	P26012	769 aa		11.31	□□□□□ -0.6
CACNA1A-256	ENST00000637981	PDE4A	P27815	886 aa		11.31	□□□□□ -0.6
CACNA1A-256	ENST00000637981	EVX2	Q03828	476 aa		11.31	□□□□□ -0.6
CACNA1A-256	ENST00000637981	TLE2	Q04725	743 aa		11.31	□□□□□ -0.6
CACNA1A-256	ENST00000637981	KIAA1755	Q5JYT7	1200 aa		11.31	□□□□□ -0.6
CACNA1A-256	ENST00000637981	TSHZ3	Q63HK5	1081 aa		11.31	□□□□□ -0.6
CACNA1A-256	ENST00000637981	ABRA	Q8N0Z2	381 aa		11.31	□□□□□ -0.6
CACNA1A-256	ENST00000637981	KBTBD3	Q8NAB2	608 aa		11.31	□□□□□ -0.6
CACNA1A-256	ENST00000637981	ATG4C	Q96DT6	458 aa		11.31	□□□□□ -0.6
CACNA1A-256	ENST00000637981	RNPC3	Q96LT9	517 aa	Known RBP	11.31	□□□□□ -0.6
CACNA1A-256	ENST00000637981	CRNKL1	Q9BZJ0	848 aa	Known RBP	11.31	□□□□□ -0.6
CACNA1A-256	ENST00000637981	XPNPEP3	Q9NQH7	507 aa		11.31	□□□□□ -0.6
CACNA1A-256	ENST00000637981	PRDM6	Q9NQX0	595 aa		11.31	□□□□□ -0.6
CACNA1A-256	ENST00000637981	TACC3	Q9Y6A5	838 aa		11.31	□□□□□ -0.6
CACNA1A-256	ENST00000637981	PARP14	Q460N5	1801 aa		11.3	□□□□□ -0.6
CACNA1A-256	ENST00000637981	TMEM265	A0A087WTH1	108 aa		11.3	□□□□□ -0.6
CACNA1A-256	ENST00000637981	HIP1	O00291	1037 aa		11.3	□□□□□ -0.6
CACNA1A-256	ENST00000637981	CLTB	P09497	229 aa		11.3	□□□□□ -0.6
CACNA1A-256	ENST00000637981	RARB	P10826	455 aa		11.3	□□□□□ -0.6
CACNA1A-256	ENST00000637981	FCER1A	P12319	257 aa		11.3	□□□□□ -0.6
CACNA1A-256	ENST00000637981	SLC9C2	Q5TAH2	1124 aa		11.3	□□□□□ -0.6
CACNA1A-256	ENST00000637981	TMEM179	Q6ZVK1	233 aa		11.3	□□□□□ -0.6
CACNA1A-256	ENST00000637981	SPICE1	Q8N0Z3	855 aa		11.3	□□□□□ -0.6
CACNA1A-256	ENST00000637981	SLC44A5	Q8NCS7	719 aa		11.3	□□□□□ -0.6
CACNA1A-256	ENST00000637981	SYMPK	Q92797	1274 aa	Known RBP	11.3	□□□□□ -0.6
CACNA1A-256	ENST00000637981	FSD1	Q9BTV5	496 aa		11.3	□□□□□ -0.6
CACNA1A-256	ENST00000637981	PHF24	Q9UPV7	400 aa		11.3	□□□□□ -0.6
CACNA1A-256	ENST00000637981	GTF3C3	Q9Y5Q9	886 aa		11.3	□□□□□ -0.6
CACNA1A-256	ENST00000637981	PQBP1	O60828	265 aa	Known RBP	11.29	□□□□□ -0.6
CACNA1A-256	ENST00000637981	SLC25A27	O95847	323 aa		11.29	□□□□□ -0.6
CACNA1A-256	ENST00000637981	PGK1	P00558	417 aa		11.29	□□□□□ -0.6
CACNA1A-256	ENST00000637981	RAG1	P15918	1043 aa		11.29	□□□□□ -0.6
CACNA1A-256	ENST00000637981	EPHB4	P54760	987 aa		11.29	□□□□□ -0.6
CACNA1A-256	ENST00000637981	TMEM132B	Q14DG7	1078 aa		11.29	□□□□□ -0.6
CACNA1A-256	ENST00000637981	UBE3C	Q15386	1083 aa		11.29	□□□□□ -0.6
CACNA1A-256	ENST00000637981	TTC22	Q5TAA0	569 aa		11.29	□□□□□ -0.6
CACNA1A-256	ENST00000637981	RNF180	Q86T96	592 aa		11.29	□□□□□ -0.6
CACNA1A-256	ENST00000637981	SDR42E1	Q8WUS8	393 aa		11.29	□□□□□ -0.6
CACNA1A-256	ENST00000637981	RILPL2	Q969X0	211 aa		11.29	□□□□□ -0.6
CACNA1A-256	ENST00000637981	MMP19	Q99542	508 aa		11.29	□□□□□ -0.6
CACNA1A-256	ENST00000637981	ARHGEF10L	Q9HCE6	1279 aa		11.29	□□□□□ -0.6
CACNA1A-256	ENST00000637981	PRUNE2	Q8WUY3	3088 aa		11.28	□□□□□ -0.6
CACNA1A-256	ENST00000637981		A0A1W2PQ45	241 aa	Predicted RBP	11.28	□□□□□ -0.6
CACNA1A-256	ENST00000637981		A0A1W2PQY0	241 aa		11.28	□□□□□ -0.6
CACNA1A-256	ENST00000637981	TCRBV5S4A2T	A0A5A2	114 aa		11.28	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms