RNA–Protein interactions for RNA: ENST00000637952.1

CACNA1A-254, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 3,894 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-254ENST00000637952 BCORQ6W2J9 1755 aa9.87□□□□□ -0.83
CACNA1A-254ENST00000637952 COL1A1P02452 1464 aaPredicted RBP9.87□□□□□ -0.83
CACNA1A-254ENST00000637952 TOMM70O94826 608 aa9.87□□□□□ -0.83
CACNA1A-254ENST00000637952 DEXIO95424 95 aa9.87□□□□□ -0.83
CACNA1A-254ENST00000637952 GNA11P29992 359 aa9.87□□□□□ -0.83
CACNA1A-254ENST00000637952 MRPL12P52815 198 aaKnown RBP9.87□□□□□ -0.83
CACNA1A-254ENST00000637952 CHMP4BP1P59074 171 aa9.87□□□□□ -0.83
CACNA1A-254ENST00000637952 SNAP25P60880 206 aa9.87□□□□□ -0.83
CACNA1A-254ENST00000637952 EVX2Q03828 476 aa9.87□□□□□ -0.83
CACNA1A-254ENST00000637952 MKRN1Q9UHC7 482 aaKnown RBP9.87□□□□□ -0.83
CACNA1A-254ENST00000637952 ZSCAN20P17040 1043 aaPredicted RBP9.87□□□□□ -0.83
CACNA1A-254ENST00000637952 ECE1P42892 770 aa9.87□□□□□ -0.83
CACNA1A-254ENST00000637952 FBXO11Q86XK2 927 aa9.87□□□□□ -0.83
CACNA1A-254ENST00000637952 EGFL6Q8IUX8 553 aa9.87□□□□□ -0.83
CACNA1A-254ENST00000637952 SNX21Q969T3 373 aa9.87□□□□□ -0.83
CACNA1A-254ENST00000637952 OPTNQ96CV9 577 aa9.87□□□□□ -0.83
CACNA1A-254ENST00000637952 CCDC34Q96HJ3 373 aa9.87□□□□□ -0.83
CACNA1A-254ENST00000637952 ZNF396Q96N95 335 aaPredicted RBP9.87□□□□□ -0.83
CACNA1A-254ENST00000637952 CCPG1Q9ULG6 757 aa9.87□□□□□ -0.83
CACNA1A-254ENST00000637952 C19orf81C9J6K1 198 aa9.86□□□□□ -0.83
CACNA1A-254ENST00000637952 JAK2O60674 1132 aa9.86□□□□□ -0.83
CACNA1A-254ENST00000637952 KIF22Q14807 665 aa9.86□□□□□ -0.83
CACNA1A-254ENST00000637952 ANKRD35Q8N283 1001 aa9.86□□□□□ -0.83
CACNA1A-254ENST00000637952 L3MBTL3Q96JM7 780 aaPredicted RBP9.86□□□□□ -0.83
CACNA1A-254ENST00000637952 MPHOSPH6Q99547 160 aaKnown RBP9.86□□□□□ -0.83
CACNA1A-254ENST00000637952 RPAP3Q9H6T3 665 aaPredicted RBP9.86□□□□□ -0.83
CACNA1A-254ENST00000637952 HOXC10Q9NYD6 342 aa9.86□□□□□ -0.83
CACNA1A-254ENST00000637952 NYAP2Q9P242 653 aa9.86□□□□□ -0.83
CACNA1A-254ENST00000637952 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.86□□□□□ -0.83
CACNA1A-254ENST00000637952 PCDHA1Q9Y5I3 950 aa9.86□□□□□ -0.83
CACNA1A-254ENST00000637952 ZBTB22O15209 634 aa9.86□□□□□ -0.83
CACNA1A-254ENST00000637952 FIBPO43427 364 aa9.86□□□□□ -0.83
CACNA1A-254ENST00000637952 CALML3P27482 149 aa9.86□□□□□ -0.83
CACNA1A-254ENST00000637952 SMAP1Q8IYB5 467 aaPredicted RBP9.86□□□□□ -0.83
CACNA1A-254ENST00000637952 BICD2Q8TD16 824 aa9.86□□□□□ -0.83
CACNA1A-254ENST00000637952 NPM3O75607 178 aaKnown RBP9.86□□□□□ -0.83
CACNA1A-254ENST00000637952 NDUFB10O96000 172 aa9.86□□□□□ -0.83
CACNA1A-254ENST00000637952 CCNA1P78396 465 aa9.86□□□□□ -0.83
CACNA1A-254ENST00000637952 FMR1Q06787 632 aaKnown RBP eCLIP9.86□□□□□ -0.83
CACNA1A-254ENST00000637952 VGLL4Q14135 290 aa9.86□□□□□ -0.83
CACNA1A-254ENST00000637952 TSGA10IPQ3SY00 556 aa9.86□□□□□ -0.83
CACNA1A-254ENST00000637952 SYDE2Q5VT97 1194 aa9.86□□□□□ -0.83
CACNA1A-254ENST00000637952 RCSD1Q6JBY9 416 aa9.86□□□□□ -0.83
CACNA1A-254ENST00000637952 LY9Q9HBG7 655 aa9.86□□□□□ -0.83
CACNA1A-254ENST00000637952 PITPNM2Q9BZ72 1349 aa9.86□□□□□ -0.83
CACNA1A-254ENST00000637952 N4BP2Q86UW6 1770 aaPredicted RBP9.86□□□□□ -0.83
CACNA1A-254ENST00000637952 CHD4Q14839 1912 aa9.85□□□□□ -0.83
CACNA1A-254ENST00000637952 STX6O43752 255 aa9.85□□□□□ -0.83
CACNA1A-254ENST00000637952 SLC20A2Q08357 652 aa9.85□□□□□ -0.83
CACNA1A-254ENST00000637952 TAF1CQ15572 869 aaPredicted RBP9.85□□□□□ -0.83
CACNA1A-254ENST00000637952 FAM160B2Q86V87 743 aa9.85□□□□□ -0.83
CACNA1A-254ENST00000637952 GTF3C6Q969F1 213 aa9.85□□□□□ -0.83
CACNA1A-254ENST00000637952 VCPKMTQ9H867 229 aa9.85□□□□□ -0.83
CACNA1A-254ENST00000637952 VPS54Q9P1Q0 977 aa9.85□□□□□ -0.83
CACNA1A-254ENST00000637952 PFKFB2O60825 505 aa9.85□□□□□ -0.83
CACNA1A-254ENST00000637952 CETPP11597 493 aa9.85□□□□□ -0.83
CACNA1A-254ENST00000637952 JAKMIP3Q5VZ66 844 aa9.85□□□□□ -0.83
CACNA1A-254ENST00000637952 CLMNQ96JQ2 1002 aa9.85□□□□□ -0.83
CACNA1A-254ENST00000637952 PIGSQ96S52 555 aa9.85□□□□□ -0.83
CACNA1A-254ENST00000637952 AMNQ9BXJ7 453 aa9.85□□□□□ -0.83
CACNA1A-254ENST00000637952 ZMYM6O95789 1325 aa9.85□□□□□ -0.83
CACNA1A-254ENST00000637952 IRS2Q9Y4H2 1338 aa9.85□□□□□ -0.83
CACNA1A-254ENST00000637952 B4DLN1 442 aa9.85□□□□□ -0.83
CACNA1A-254ENST00000637952 USP17L15C9J2P7 530 aa9.85□□□□□ -0.83
CACNA1A-254ENST00000637952 USP17L13C9JLJ4 530 aa9.85□□□□□ -0.83
CACNA1A-254ENST00000637952 USP17L11C9JVI0 530 aa9.85□□□□□ -0.83
CACNA1A-254ENST00000637952 USP17L18D6R9N7 530 aa9.85□□□□□ -0.83
CACNA1A-254ENST00000637952 USP17L22D6RA61 530 aa9.85□□□□□ -0.83
CACNA1A-254ENST00000637952 USP17L17D6RBQ6 530 aa9.85□□□□□ -0.83
CACNA1A-254ENST00000637952 USP17L19D6RCP7 530 aa9.85□□□□□ -0.83
CACNA1A-254ENST00000637952 USP17L20D6RJB6 530 aa9.85□□□□□ -0.83
CACNA1A-254ENST00000637952 USP17L24Q0WX57 530 aa9.85□□□□□ -0.83
CACNA1A-254ENST00000637952 SCRN1Q12765 414 aa9.85□□□□□ -0.83
CACNA1A-254ENST00000637952 DEFB115Q30KQ5 88 aa9.85□□□□□ -0.83
CACNA1A-254ENST00000637952 SH3BP5LQ7L8J4 393 aa9.85□□□□□ -0.83
CACNA1A-254ENST00000637952 PRPF38AQ8NAV1 312 aaKnown RBP9.85□□□□□ -0.83
CACNA1A-254ENST00000637952 DCAF4Q8WV16 495 aa9.85□□□□□ -0.83
CACNA1A-254ENST00000637952 GPKOWQ92917 476 aaPredicted RBP eCLIP9.85□□□□□ -0.83
CACNA1A-254ENST00000637952 SLF1Q9BQI6 1058 aa9.85□□□□□ -0.83
CACNA1A-254ENST00000637952 TMEM88BA6NKF7 163 aa9.84□□□□□ -0.83
CACNA1A-254ENST00000637952 BACE1P56817 501 aa9.84□□□□□ -0.83
CACNA1A-254ENST00000637952 DMTNQ08495 405 aa9.84□□□□□ -0.83
CACNA1A-254ENST00000637952 TTBK2Q6IQ55 1244 aa9.84□□□□□ -0.83
CACNA1A-254ENST00000637952 TRMT1LQ7Z2T5 733 aaKnown RBP9.84□□□□□ -0.83
CACNA1A-254ENST00000637952 CCDC102AQ96A19 550 aa9.84□□□□□ -0.83
CACNA1A-254ENST00000637952 KLRG1Q96E93 195 aa9.84□□□□□ -0.83
CACNA1A-254ENST00000637952 RGPD3A6NKT7 1758 aaPredicted RBP9.84□□□□□ -0.83
CACNA1A-254ENST00000637952 RGPD4Q7Z3J3 1758 aa9.84□□□□□ -0.83
CACNA1A-254ENST00000637952 SMCO2A6NFE2 343 aa9.84□□□□□ -0.83
CACNA1A-254ENST00000637952 PLEKHA8P1O95397 391 aa9.84□□□□□ -0.83
CACNA1A-254ENST00000637952 GTF2A2P52657 109 aa9.84□□□□□ -0.83
CACNA1A-254ENST00000637952 COG2Q14746 738 aa9.84□□□□□ -0.83
CACNA1A-254ENST00000637952 IGDCC4Q8TDY8 1250 aa9.84□□□□□ -0.83
CACNA1A-254ENST00000637952 LPAR1Q92633 364 aa9.84□□□□□ -0.83
CACNA1A-254ENST00000637952 LLPHQ9BRT6 129 aaKnown RBP9.84□□□□□ -0.83
CACNA1A-254ENST00000637952 GINM1Q9NU53 330 aa9.84□□□□□ -0.83
CACNA1A-254ENST00000637952 KCNJ14Q9UNX9 436 aa9.84□□□□□ -0.83
CACNA1A-254ENST00000637952 MRPL11Q9Y3B7 192 aaKnown RBP9.84□□□□□ -0.83
CACNA1A-254ENST00000637952 LRP5O75197 1615 aa9.84□□□□□ -0.83
CACNA1A-254ENST00000637952 ME1P48163 572 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms