RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 CEP95Q96GE4 821 aa9.39□□□□□ -0.91
PNKP-229ENST00000637897 FAM227BQ96M60 508 aa9.39□□□□□ -0.91
PNKP-229ENST00000637897 KANSL2Q9H9L4 492 aa9.39□□□□□ -0.91
PNKP-229ENST00000637897 HMX1Q9NP08 348 aaPredicted RBP9.39□□□□□ -0.91
PNKP-229ENST00000637897 IL17RBQ9NRM6 502 aa9.39□□□□□ -0.91
PNKP-229ENST00000637897 RIPK3Q9Y572 518 aa9.39□□□□□ -0.91
PNKP-229ENST00000637897 DNAH12Q6ZR08 3092 aa9.38□□□□□ -0.91
PNKP-229ENST00000637897 A0A0D9SFI3 127 aa9.38□□□□□ -0.91
PNKP-229ENST00000637897 VWA5AO00534 786 aa9.38□□□□□ -0.91
PNKP-229ENST00000637897 WDR46O15213 610 aaKnown RBP9.38□□□□□ -0.91
PNKP-229ENST00000637897 FLOT1O75955 427 aa9.38□□□□□ -0.91
PNKP-229ENST00000637897 ZFYP08048 801 aaPredicted RBP9.38□□□□□ -0.91
PNKP-229ENST00000637897 CYBAP13498 195 aa9.38□□□□□ -0.91
PNKP-229ENST00000637897 ZKSCAN1P17029 563 aaPredicted RBP9.38□□□□□ -0.91
PNKP-229ENST00000637897 ADORA2AP29274 412 aa9.38□□□□□ -0.91
PNKP-229ENST00000637897 NOVP48745 357 aa9.38□□□□□ -0.91
PNKP-229ENST00000637897 FAM47AQ5JRC9 791 aa9.38□□□□□ -0.91
PNKP-229ENST00000637897 PRAMEF19Q5SWL8 479 aa9.38□□□□□ -0.91
PNKP-229ENST00000637897 CHRDL2Q6WN34 429 aa9.38□□□□□ -0.91
PNKP-229ENST00000637897 PPP4R3CPQ6ZMV5 832 aa9.38□□□□□ -0.91
PNKP-229ENST00000637897 CENPQQ7L2Z9 268 aaPredicted RBP9.38□□□□□ -0.91
PNKP-229ENST00000637897 ZNF589Q86UQ0 364 aaPredicted RBP9.38□□□□□ -0.91
PNKP-229ENST00000637897 SHCBP1Q8NEM2 672 aa9.38□□□□□ -0.91
PNKP-229ENST00000637897 DPF3Q92784 378 aa9.38□□□□□ -0.91
PNKP-229ENST00000637897 MKL1Q969V6 931 aa9.38□□□□□ -0.91
PNKP-229ENST00000637897 FGD4Q96M96 766 aa9.38□□□□□ -0.91
PNKP-229ENST00000637897 TANGO6Q9C0B7 1094 aa9.38□□□□□ -0.91
PNKP-229ENST00000637897 NBPF3Q9H094 633 aa9.38□□□□□ -0.91
PNKP-229ENST00000637897 IL25Q9H293 177 aa9.38□□□□□ -0.91
PNKP-229ENST00000637897 HOXC10Q9NYD6 342 aa9.38□□□□□ -0.91
PNKP-229ENST00000637897 NYAP2Q9P242 653 aa9.38□□□□□ -0.91
PNKP-229ENST00000637897 PPP1R9AQ9ULJ8 1098 aa9.38□□□□□ -0.91
PNKP-229ENST00000637897 MYH4Q9Y623 1939 aa9.38□□□□□ -0.91
PNKP-229ENST00000637897 PLIN4Q96Q06 1357 aa9.37□□□□□ -0.91
PNKP-229ENST00000637897 F5H6K3 240 aa9.37□□□□□ -0.91
PNKP-229ENST00000637897 NMT2O60551 498 aa9.37□□□□□ -0.91
PNKP-229ENST00000637897 FGRP09769 529 aa9.37□□□□□ -0.91
PNKP-229ENST00000637897 TAL1P17542 331 aaPredicted RBP9.37□□□□□ -0.91
PNKP-229ENST00000637897 ATP2B2Q01814 1243 aa9.37□□□□□ -0.91
PNKP-229ENST00000637897 CTDSPL2Q05D32 466 aa9.37□□□□□ -0.91
PNKP-229ENST00000637897 KLRC3Q07444 240 aa9.37□□□□□ -0.91
PNKP-229ENST00000637897 PPARAQ07869 468 aa9.37□□□□□ -0.91
PNKP-229ENST00000637897 PLEKHM2Q8IWE5 1019 aa9.37□□□□□ -0.91
PNKP-229ENST00000637897 NEDD1Q8NHV4 660 aa9.37□□□□□ -0.91
PNKP-229ENST00000637897 FSD1Q9BTV5 496 aa9.37□□□□□ -0.91
PNKP-229ENST00000637897 LNPKQ9C0E8 428 aa9.37□□□□□ -0.91
PNKP-229ENST00000637897 ARHGEF10LQ9HCE6 1279 aa9.37□□□□□ -0.91
PNKP-229ENST00000637897 MTMR4Q9NYA4 1195 aa9.37□□□□□ -0.91
PNKP-229ENST00000637897 SOX1O00570 391 aaPredicted RBP9.36□□□□□ -0.91
PNKP-229ENST00000637897 ERC2O15083 957 aa9.36□□□□□ -0.91
PNKP-229ENST00000637897 PGK2P07205 417 aa9.36□□□□□ -0.91
PNKP-229ENST00000637897 GNAT2P19087 354 aa9.36□□□□□ -0.91
PNKP-229ENST00000637897 PDE4AP27815 886 aa9.36□□□□□ -0.91
PNKP-229ENST00000637897 CCNA1P78396 465 aa9.36□□□□□ -0.91
PNKP-229ENST00000637897 LRRC26Q2I0M4 334 aa9.36□□□□□ -0.91
PNKP-229ENST00000637897 ZNF792Q3KQV3 632 aa9.36□□□□□ -0.91
PNKP-229ENST00000637897 WDR78Q5VTH9 848 aa9.36□□□□□ -0.91
PNKP-229ENST00000637897 ANO1Q5XXA6 986 aa9.36□□□□□ -0.91
PNKP-229ENST00000637897 RIOX2Q8IUF8 465 aa9.36□□□□□ -0.91
PNKP-229ENST00000637897 LRRC47Q8N1G4 583 aaKnown RBP9.36□□□□□ -0.91
PNKP-229ENST00000637897 PIAS4Q8N2W9 510 aaPredicted RBP9.36□□□□□ -0.91
PNKP-229ENST00000637897 ANKLE1Q8NAG6 615 aa9.36□□□□□ -0.91
PNKP-229ENST00000637897 GCC1Q96CN9 775 aa9.36□□□□□ -0.91
PNKP-229ENST00000637897 GPATCH3Q96I76 525 aa9.36□□□□□ -0.91
PNKP-229ENST00000637897 MAML3Q96JK9 1138 aa9.36□□□□□ -0.91
PNKP-229ENST00000637897 CLIP2Q9UDT6 1046 aa9.36□□□□□ -0.91
PNKP-229ENST00000637897 ZNF536O15090 1300 aa9.35□□□□□ -0.91
PNKP-229ENST00000637897 DNAJC25-GNG10A0A024R161 153 aa9.35□□□□□ -0.91
PNKP-229ENST00000637897 FGAP02671 866 aa9.35□□□□□ -0.91
PNKP-229ENST00000637897 TDO2P48775 406 aa9.35□□□□□ -0.91
PNKP-229ENST00000637897 IRX5P78411 483 aaPredicted RBP9.35□□□□□ -0.91
PNKP-229ENST00000637897 TFAP4Q01664 338 aa9.35□□□□□ -0.91
PNKP-229ENST00000637897 NUCB1Q02818 461 aa9.35□□□□□ -0.91
PNKP-229ENST00000637897 NMIQ13287 307 aaPredicted RBP9.35□□□□□ -0.91
PNKP-229ENST00000637897 ALX1Q15699 326 aa9.35□□□□□ -0.91
PNKP-229ENST00000637897 OLFML2BQ68BL8 750 aa9.35□□□□□ -0.91
PNKP-229ENST00000637897 SAMD1Q6SPF0 538 aaPredicted RBP9.35□□□□□ -0.91
PNKP-229ENST00000637897 NECAB2Q7Z6G3 386 aa9.35□□□□□ -0.91
PNKP-229ENST00000637897 NCAPG2Q86XI2 1143 aa9.35□□□□□ -0.91
PNKP-229ENST00000637897 TRMT44Q8IYL2 757 aaKnown RBP9.35□□□□□ -0.91
PNKP-229ENST00000637897 MB21D1Q8N884 522 aa9.35□□□□□ -0.91
PNKP-229ENST00000637897 EVI5LQ96CN4 794 aa9.35□□□□□ -0.91
PNKP-229ENST00000637897 GDF15Q99988 308 aa9.35□□□□□ -0.91
PNKP-229ENST00000637897 OSBPL3Q9H4L5 887 aa9.35□□□□□ -0.91
PNKP-229ENST00000637897 C11orf49Q9H6J7 331 aa9.35□□□□□ -0.91
PNKP-229ENST00000637897 MKNK2Q9HBH9 465 aa9.35□□□□□ -0.91
PNKP-229ENST00000637897 DDX20Q9UHI6 824 aaKnown RBP9.35□□□□□ -0.91
PNKP-229ENST00000637897 PLXNA1Q9UIW2 1896 aa9.35□□□□□ -0.91
PNKP-229ENST00000637897 ANAPC4Q9UJX5 808 aa9.35□□□□□ -0.91
PNKP-229ENST00000637897 ZMYND8Q9ULU4 1186 aaPredicted RBP9.35□□□□□ -0.91
PNKP-229ENST00000637897 ASTN1O14525 1302 aa9.34□□□□□ -0.91
PNKP-229ENST00000637897 ATP2A1O14983 1001 aa9.34□□□□□ -0.91
PNKP-229ENST00000637897 ADCY6O43306 1168 aa9.34□□□□□ -0.91
PNKP-229ENST00000637897 STRNO43815 780 aa9.34□□□□□ -0.91
PNKP-229ENST00000637897 APPP05067 770 aa9.34□□□□□ -0.91
PNKP-229ENST00000637897 ZNF865P0CJ78 1059 aaPredicted RBP9.34□□□□□ -0.91
PNKP-229ENST00000637897 HSPD1P10809 573 aaKnown RBP9.34□□□□□ -0.91
PNKP-229ENST00000637897 STAT3P40763 770 aa9.34□□□□□ -0.91
PNKP-229ENST00000637897 PLS1Q14651 629 aa9.34□□□□□ -0.91
PNKP-229ENST00000637897 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms