RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 ATG4CQ96DT6 458 aa15.08■□□□□ 0.01
CTSD-208ENST00000636843 LRRCC1Q9C099 1032 aa15.08■□□□□ 0.01
CTSD-208ENST00000636843 KANSL2Q9H9L4 492 aa15.08■□□□□ 0.01
CTSD-208ENST00000636843 CYP2D7A0A087X1C5 515 aa15.07■□□□□ 0
CTSD-208ENST00000636843 COBLO75128 1261 aa15.07■□□□□ 0
CTSD-208ENST00000636843 SLC25A27O95847 323 aa15.07■□□□□ 0
CTSD-208ENST00000636843 CLEC10AQ8IUN9 316 aa15.07■□□□□ 0
CTSD-208ENST00000636843 DEFB123Q8N688 67 aa15.07■□□□□ 0
CTSD-208ENST00000636843 SLC4A4Q9Y6R1 1079 aa15.07■□□□□ 0
CTSD-208ENST00000636843 SEPT4O43236 478 aa15.07■□□□□ 0
CTSD-208ENST00000636843 FCER1AP12319 257 aa15.07■□□□□ 0
CTSD-208ENST00000636843 MDM2Q00987 491 aaPredicted RBP15.07■□□□□ 0
CTSD-208ENST00000636843 SLC17A8Q8NDX2 589 aa15.07■□□□□ 0
CTSD-208ENST00000636843 LBHD1Q9BQE6 289 aaPredicted RBP15.07■□□□□ 0
CTSD-208ENST00000636843 ADAMTS5Q9UNA0 930 aa15.07■□□□□ 0
CTSD-208ENST00000636843 ZNF236Q9UL36 1845 aa15.06■□□□□ 0
CTSD-208ENST00000636843 KBTBD13C9JR72 458 aa15.06■□□□□ 0
CTSD-208ENST00000636843 SMIM22K7EJ46 135 aa15.06■□□□□ 0
CTSD-208ENST00000636843 EEF2P13639 858 aaKnown RBP15.06■□□□□ 0
CTSD-208ENST00000636843 ATN1P54259 1190 aaPredicted RBP15.06■□□□□ 0
CTSD-208ENST00000636843 CTR9Q6PD62 1173 aa15.06■□□□□ 0
CTSD-208ENST00000636843 CHD1LQ86WJ1 897 aa15.06■□□□□ 0
CTSD-208ENST00000636843 GOPCQ9HD26 462 aa15.06■□□□□ 0
CTSD-208ENST00000636843 PRKAG2Q9UGJ0 569 aa15.06■□□□□ 0
CTSD-208ENST00000636843 RLFQ13129 1914 aa15.05■□□□□ -0
CTSD-208ENST00000636843 RTP1P59025 263 aa15.05■□□□□ -0
CTSD-208ENST00000636843 TMEM132BQ14DG7 1078 aa15.05■□□□□ -0
CTSD-208ENST00000636843 GJC2Q5T442 439 aaPredicted RBP15.05■□□□□ -0
CTSD-208ENST00000636843 SAMD1Q6SPF0 538 aaPredicted RBP15.05■□□□□ -0
CTSD-208ENST00000636843 MAML3Q96JK9 1138 aa15.05■□□□□ -0
CTSD-208ENST00000636843 PUS7LQ9H0K6 701 aaKnown RBP15.05■□□□□ -0
CTSD-208ENST00000636843 ARPP21Q9UBL0 812 aaPredicted RBP15.05■□□□□ -0
CTSD-208ENST00000636843 NRBP1Q9UHY1 535 aa15.05■□□□□ -0
CTSD-208ENST00000636843 A0A0G2JMZ2 1700 aa15.04■□□□□ -0
CTSD-208ENST00000636843 CHGBP05060 677 aa15.04■□□□□ -0
CTSD-208ENST00000636843 COPB2P35606 906 aa15.04■□□□□ -0
CTSD-208ENST00000636843 SBK1Q52WX2 424 aa15.04■□□□□ -0
CTSD-208ENST00000636843 GIMAP6Q6P9H5 292 aa15.04■□□□□ -0
CTSD-208ENST00000636843 SLC39A5Q6ZMH5 540 aa15.04■□□□□ -0
CTSD-208ENST00000636843 RIOX2Q8IUF8 465 aa15.04■□□□□ -0
CTSD-208ENST00000636843 ECHDC1Q9NTX5 307 aa15.04■□□□□ -0
CTSD-208ENST00000636843 FRMPD3Q5JV73 1810 aa15.04■□□□□ -0
CTSD-208ENST00000636843 VWA5AO00534 786 aa15.03■□□□□ -0
CTSD-208ENST00000636843 SMARCA5O60264 1052 aaPredicted RBP15.03■□□□□ -0
CTSD-208ENST00000636843 STRBPQ96SI9 672 aaKnown RBP15.03■□□□□ -0
CTSD-208ENST00000636843 MMP19Q99542 508 aa15.03■□□□□ -0
CTSD-208ENST00000636843 UPF2Q9HAU5 1272 aaKnown RBP15.03■□□□□ -0
CTSD-208ENST00000636843 FBXO28Q9NVF7 368 aa15.03■□□□□ -0
CTSD-208ENST00000636843 MTMR10Q9NXD2 777 aa15.03■□□□□ -0
CTSD-208ENST00000636843 PPP1R9AQ9ULJ8 1098 aa15.03■□□□□ -0
CTSD-208ENST00000636843 DIS3Q9Y2L1 958 aaKnown RBP15.03■□□□□ -0
CTSD-208ENST00000636843 BAZ2AQ9UIF9 1905 aaKnown RBP15.03■□□□□ -0
CTSD-208ENST00000636843 STAT3P40763 770 aa15.02■□□□□ -0
CTSD-208ENST00000636843 KCTD2Q14681 263 aa15.02■□□□□ -0
CTSD-208ENST00000636843 PRAMEF19Q5SWL8 479 aa15.02■□□□□ -0
CTSD-208ENST00000636843 ANO1Q5XXA6 986 aa15.02■□□□□ -0
CTSD-208ENST00000636843 Q7L0L9 218 aa15.02■□□□□ -0
CTSD-208ENST00000636843 GPATCH3Q96I76 525 aa15.02■□□□□ -0
CTSD-208ENST00000636843 ATP11BQ9Y2G3 1177 aa15.02■□□□□ -0
CTSD-208ENST00000636843 STXBP5LQ9Y2K9 1186 aa15.02■□□□□ -0
CTSD-208ENST00000636843 MYH8P13535 1937 aa15.02■□□□□ -0
CTSD-208ENST00000636843 SNX17Q15036 470 aa15.02□□□□□ -0.01
CTSD-208ENST00000636843 LRRC41Q15345 812 aa15.02□□□□□ -0.01
CTSD-208ENST00000636843 FAM83BQ5T0W9 1011 aa15.02□□□□□ -0.01
CTSD-208ENST00000636843 ANKRD45Q5TZF3 282 aa15.02□□□□□ -0.01
CTSD-208ENST00000636843 KBTBD3Q8NAB2 608 aa15.02□□□□□ -0.01
CTSD-208ENST00000636843 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.02□□□□□ -0.01
CTSD-208ENST00000636843 LNPKQ9C0E8 428 aa15.02□□□□□ -0.01
CTSD-208ENST00000636843 DCTPP1Q9H773 170 aa15.02□□□□□ -0.01
CTSD-208ENST00000636843 MKNK2Q9HBH9 465 aa15.02□□□□□ -0.01
CTSD-208ENST00000636843 NYAP2Q9P242 653 aa15.02□□□□□ -0.01
CTSD-208ENST00000636843 GSG1L2A8MUP6 293 aa15.01□□□□□ -0.01
CTSD-208ENST00000636843 RAD21O60216 631 aa15.01□□□□□ -0.01
CTSD-208ENST00000636843 MYCNP04198 464 aaPredicted RBP15.01□□□□□ -0.01
CTSD-208ENST00000636843 ZFYP08048 801 aaPredicted RBP15.01□□□□□ -0.01
CTSD-208ENST00000636843 RASA1P20936 1047 aa15.01□□□□□ -0.01
CTSD-208ENST00000636843 ZNF792Q3KQV3 632 aa15.01□□□□□ -0.01
CTSD-208ENST00000636843 C1orf53Q5VUE5 145 aa15.01□□□□□ -0.01
CTSD-208ENST00000636843 FAM109BQ6ICB4 259 aaPredicted RBP15.01□□□□□ -0.01
CTSD-208ENST00000636843 REPS2Q8NFH8 660 aa15.01□□□□□ -0.01
CTSD-208ENST00000636843 APPBP2Q92624 585 aa15.01□□□□□ -0.01
CTSD-208ENST00000636843 OSBP2Q969R2 916 aa15.01□□□□□ -0.01
CTSD-208ENST00000636843 TINF2Q9BSI4 451 aa15.01□□□□□ -0.01
CTSD-208ENST00000636843 ZNF214Q9UL59 606 aaPredicted RBP15.01□□□□□ -0.01
CTSD-208ENST00000636843 DNAH12Q6ZR08 3092 aa15.01□□□□□ -0.01
CTSD-208ENST00000636843 COL6A3P12111 3177 aa15□□□□□ -0.01
CTSD-208ENST00000636843 PGK2P07205 417 aa15□□□□□ -0.01
CTSD-208ENST00000636843 RARBP10826 455 aa15□□□□□ -0.01
CTSD-208ENST00000636843 ADCYAP1R1P41586 468 aa15□□□□□ -0.01
CTSD-208ENST00000636843 FAM47AQ5JRC9 791 aa15□□□□□ -0.01
CTSD-208ENST00000636843 MYH7P12883 1935 aa15□□□□□ -0.01
CTSD-208ENST00000636843 POTEB2H3BUK9 544 aa14.99□□□□□ -0.01
CTSD-208ENST00000636843 DLL1O00548 723 aa14.99□□□□□ -0.01
CTSD-208ENST00000636843 RNF113AO15541 343 aaKnown RBP14.99□□□□□ -0.01
CTSD-208ENST00000636843 GNAT2P19087 354 aa14.99□□□□□ -0.01
CTSD-208ENST00000636843 MSL3Q8N5Y2 521 aaKnown RBP14.99□□□□□ -0.01
CTSD-208ENST00000636843 SLF1Q9BQI6 1058 aa14.99□□□□□ -0.01
CTSD-208ENST00000636843 TEX13BQ9BXU2 312 aa14.99□□□□□ -0.01
CTSD-208ENST00000636843 ZNF287Q9HBT7 754 aa14.99□□□□□ -0.01
CTSD-208ENST00000636843 XPNPEP3Q9NQH7 507 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms